EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000016899 (Gene tree)
Gene ID: 112157310
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC112157310
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 9254 bases
Position: chrNVQA01000022.1:9790600-9799853
Accession: 112157310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000015334	MMR_HSR1	PF01926.23	4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000023462	-	4440	-	ENSOMEP00000015334	936 (aa)	XP_024145755	UPI000CF81C6D

Gene Model

Click here to download ENSOMEG00000016899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000016899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000016899	-	51	35.545	ENSOMEG00000010594	-	84	36.667
ENSOMEG00000016899	-	58	33.043	ENSOMEG00000003632	-	59	36.898
ENSOMEG00000016899	-	55	30.802	ENSOMEG00000020554	-	69	32.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000016899	-	74	60.930	ENSCSEG00000013762	-	82	64.000	Cynoglossus_semilaevis
ENSOMEG00000016899	-	100	71.574	ENSORLG00000003769	-	99	70.964	Oryzias_latipes
ENSOMEG00000016899	-	100	71.675	ENSORLG00020009935	-	99	70.558	Oryzias_latipes_hni
ENSOMEG00000016899	-	54	63.177	ENSPFOG00000013403	-	68	70.404	Poecilia_formosa
ENSOMEG00000016899	-	99	47.001	ENSPMEG00000008621	-	94	62.150	Poecilia_mexicana
ENSOMEG00000016899	-	99	48.232	ENSPREG00000013750	-	93	62.617	Poecilia_reticulata
ENSOMEG00000016899	-	76	50.000	ENSPNAG00000000165	-	85	50.000	Pygocentrus_nattereri