EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000016910 (Gene tree)
Gene ID: 112155449
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing protein 1 homolog A-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 10378 bases
Position: chrNVQA01000019.1:937806-948183
Accession: 112155449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000031821	Nop52	PF05997.12	3.1e-64	1	1
ENSOMEP00000015342	Nop52	PF05997.12	3.5e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000023480	-	4041	-	ENSOMEP00000031821	789 (aa)	XP_024142844	UPI000CF820BA
ENSOMET00000033940	-	4197	-	ENSOMEP00000015342	841 (aa)	XP_024142843	UPI000CF83C71

Gene Model

Click here to download ENSOMEG00000016910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000016910's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000016910	-	65	46.113	ENSG00000160208	RRP1B	64	50.794	Homo_sapiens
ENSOMEG00000016910	-	69	69.972	ENSAPOG00000007490	-	64	67.519	Acanthochromis_polyacanthus
ENSOMEG00000016910	-	54	56.790	ENSAMEG00000011401	RRP1B	59	56.790	Ailuropoda_melanoleuca
ENSOMEG00000016910	-	58	69.697	ENSAOCG00000017894	-	100	68.586	Amphiprion_ocellaris
ENSOMEG00000016910	-	64	69.697	ENSAPEG00000024150	-	65	67.263	Amphiprion_percula
ENSOMEG00000016910	-	65	65.206	ENSATEG00000005045	-	50	71.765	Anabas_testudineus
ENSOMEG00000016910	-	54	48.256	ENSAPLG00000004310	RRP1B	68	47.674	Anas_platyrhynchos
ENSOMEG00000016910	-	57	51.087	ENSACAG00000017851	RRP1B	61	50.546	Anolis_carolinensis
ENSOMEG00000016910	-	87	45.333	ENSANAG00000034889	RRP1B	59	55.556	Aotus_nancymaae
ENSOMEG00000016910	-	50	54.412	ENSAMXG00000043138	-	70	43.769	Astyanax_mexicanus
ENSOMEG00000016910	-	56	55.556	ENSBTAG00000017418	RRP1B	61	55.556	Bos_taurus
ENSOMEG00000016910	-	100	34.928	ENSCJAG00000017077	RRP1B	64	50.000	Callithrix_jacchus
ENSOMEG00000016910	-	51	55.556	ENSCAFG00000010621	RRP1B	63	46.774	Canis_familiaris
ENSOMEG00000016910	-	56	55.556	ENSCAFG00020018901	RRP1B	61	55.556	Canis_lupus_dingo
ENSOMEG00000016910	-	56	55.556	ENSCHIG00000021519	RRP1B	61	55.556	Capra_hircus
ENSOMEG00000016910	-	55	56.790	ENSCPOG00000002396	RRP1B	61	56.790	Cavia_porcellus
ENSOMEG00000016910	-	51	42.243	ENSCPOG00000038986	RRP1	87	43.596	Cavia_porcellus
ENSOMEG00000016910	-	100	35.731	ENSCCAG00000029384	RRP1B	64	49.606	Cebus_capucinus
ENSOMEG00000016910	-	56	55.556	ENSCATG00000017423	RRP1B	69	44.504	Cercocebus_atys
ENSOMEG00000016910	-	100	33.958	ENSCLAG00000005622	RRP1B	53	39.759	Chinchilla_lanigera
ENSOMEG00000016910	-	100	36.529	ENSCSAG00000007961	RRP1B	69	46.113	Chlorocebus_sabaeus
ENSOMEG00000016910	-	58	52.632	ENSCPBG00000010310	RRP1B	65	49.580	Chrysemys_picta_bellii
ENSOMEG00000016910	-	56	58.025	ENSCANG00000040952	RRP1B	67	44.800	Colobus_angolensis_palliatus
ENSOMEG00000016910	-	56	48.000	ENSCGRG00001023882	-	60	61.765	Cricetulus_griseus_chok1gshd
ENSOMEG00000016910	-	56	48.000	ENSCGRG00001010889	-	64	48.000	Cricetulus_griseus_chok1gshd
ENSOMEG00000016910	-	96	34.343	ENSCGRG00000001553	Rrp1b	61	48.000	Cricetulus_griseus_crigri
ENSOMEG00000016910	-	58	59.948	ENSCSEG00000020711	-	81	60.052	Cynoglossus_semilaevis
ENSOMEG00000016910	-	54	56.232	ENSDARG00000103337	rrp1	70	52.041	Danio_rerio
ENSOMEG00000016910	-	50	44.335	ENSDNOG00000019880	RRP1	82	44.529	Dasypus_novemcinctus
ENSOMEG00000016910	-	58	45.600	ENSDNOG00000032774	RRP1B	65	45.600	Dasypus_novemcinctus
ENSOMEG00000016910	-	57	57.143	ENSETEG00000019489	RRP1B	60	57.143	Echinops_telfairi
ENSOMEG00000016910	-	51	43.765	ENSEASG00005001673	RRP1	85	46.770	Equus_asinus_asinus
ENSOMEG00000016910	-	58	48.413	ENSEASG00005001687	RRP1B	65	48.413	Equus_asinus_asinus
ENSOMEG00000016910	-	58	48.413	ENSECAG00000018018	RRP1B	65	48.413	Equus_caballus
ENSOMEG00000016910	-	51	44.235	ENSECAG00000015703	RRP1	85	47.287	Equus_caballus
ENSOMEG00000016910	-	82	57.870	ENSELUG00000015885	-	95	57.639	Esox_lucius
ENSOMEG00000016910	-	56	55.556	ENSFCAG00000010272	RRP1B	60	55.556	Felis_catus
ENSOMEG00000016910	-	53	47.569	ENSFALG00000002024	RRP1B	65	47.896	Ficedula_albicollis
ENSOMEG00000016910	-	51	51.111	ENSFDAG00000010899	RRP1B	55	53.086	Fukomys_damarensis
ENSOMEG00000016910	-	66	59.290	ENSGMOG00000001953	-	73	58.400	Gadus_morhua
ENSOMEG00000016910	-	60	53.425	ENSGALG00000035696	RRP1B	70	46.747	Gallus_gallus
ENSOMEG00000016910	-	84	61.538	ENSGACG00000001438	rrp1	80	63.980	Gasterosteus_aculeatus
ENSOMEG00000016910	-	66	52.473	ENSGAGG00000000375	RRP1B	64	51.226	Gopherus_agassizii
ENSOMEG00000016910	-	65	46.113	ENSGGOG00000012069	RRP1B	64	50.794	Gorilla_gorilla
ENSOMEG00000016910	-	56	53.488	ENSHGLG00000004968	RRP1B	60	53.488	Heterocephalus_glaber_female
ENSOMEG00000016910	-	50	53.488	ENSHGLG00100002232	RRP1B	53	53.488	Heterocephalus_glaber_male
ENSOMEG00000016910	-	63	56.127	ENSHCOG00000018388	-	56	63.736	Hippocampus_comes
ENSOMEG00000016910	-	52	61.194	ENSIPUG00000000673	-	78	50.739	Ictalurus_punctatus
ENSOMEG00000016910	-	51	43.704	ENSSTOG00000011116	RRP1	82	46.612	Ictidomys_tridecemlineatus
ENSOMEG00000016910	-	55	46.341	ENSSTOG00000011790	RRP1B	64	46.341	Ictidomys_tridecemlineatus
ENSOMEG00000016910	-	68	42.433	ENSJJAG00000021279	Rrp1b	56	58.025	Jaculus_jaculus
ENSOMEG00000016910	-	66	64.160	ENSKMAG00000005539	rrp1	83	63.659	Kryptolebias_marmoratus
ENSOMEG00000016910	-	56	54.762	ENSLACG00000017332	-	65	48.413	Latimeria_chalumnae
ENSOMEG00000016910	-	71	57.778	ENSLOCG00000004064	-	76	54.839	Lepisosteus_oculatus
ENSOMEG00000016910	-	52	44.860	ENSLAFG00000000766	RRP1B	95	45.388	Loxodonta_africana
ENSOMEG00000016910	-	100	36.638	ENSMFAG00000039152	RRP1B	69	44.562	Macaca_fascicularis
ENSOMEG00000016910	-	100	36.485	ENSMMUG00000000104	RRP1B	59	55.556	Macaca_mulatta
ENSOMEG00000016910	-	100	36.473	ENSMNEG00000034269	RRP1B	69	44.772	Macaca_nemestrina
ENSOMEG00000016910	-	99	35.496	ENSMLEG00000040044	RRP1B	66	44.277	Mandrillus_leucophaeus
ENSOMEG00000016910	-	69	60.500	ENSMAMG00000007131	-	56	61.153	Mastacembelus_armatus
ENSOMEG00000016910	-	56	48.649	ENSMGAG00000014591	RRP1B	62	49.322	Meleagris_gallopavo
ENSOMEG00000016910	-	53	48.780	ENSMAUG00000021508	Rrp1b	61	48.000	Mesocricetus_auratus
ENSOMEG00000016910	-	56	58.025	ENSMICG00000004686	RRP1B	66	50.000	Microcebus_murinus
ENSOMEG00000016910	-	55	55.056	ENSMOCG00000001117	Rrp1b	63	47.967	Microtus_ochrogaster
ENSOMEG00000016910	-	60	48.189	ENSMODG00000021033	RRP1B	71	47.013	Monodelphis_domestica
ENSOMEG00000016910	-	55	53.763	MGP_CAROLIEiJ_G0021376	Rrp1b	58	61.765	Mus_caroli
ENSOMEG00000016910	-	53	53.763	ENSMUSG00000058392	Rrp1b	58	60.294	Mus_musculus
ENSOMEG00000016910	-	56	47.967	MGP_PahariEiJ_G0023695	Rrp1b	58	58.824	Mus_pahari
ENSOMEG00000016910	-	55	53.763	MGP_SPRETEiJ_G0022290	Rrp1b	58	60.294	Mus_spretus
ENSOMEG00000016910	-	58	48.780	ENSMLUG00000007738	RRP1B	65	48.780	Myotis_lucifugus
ENSOMEG00000016910	-	53	56.790	ENSNGAG00000021073	Rrp1b	57	56.790	Nannospalax_galili
ENSOMEG00000016910	-	56	58.025	ENSNLEG00000001490	RRP1B	61	58.025	Nomascus_leucogenys
ENSOMEG00000016910	-	66	56.780	ENSMEUG00000003226	-	63	56.780	Notamacropus_eugenii
ENSOMEG00000016910	-	52	54.321	ENSODEG00000013177	RRP1B	58	54.321	Octodon_degus
ENSOMEG00000016910	-	58	44.882	ENSOANG00000006470	RRP1B	67	44.882	Ornithorhynchus_anatinus
ENSOMEG00000016910	-	73	44.108	ENSOCUG00000025931	RRP1B	55	52.381	Oryctolagus_cuniculus
ENSOMEG00000016910	-	100	68.812	ENSORLG00020007199	-	100	68.147	Oryzias_latipes_hni
ENSOMEG00000016910	-	100	69.799	ENSORLG00015004425	-	100	70.045	Oryzias_latipes_hsok
ENSOMEG00000016910	-	52	59.091	ENSOGAG00000009872	RRP1B	62	63.636	Otolemur_garnettii
ENSOMEG00000016910	-	50	54.167	ENSOARG00000011314	RRP1B	57	54.167	Ovis_aries
ENSOMEG00000016910	-	60	46.061	ENSPPAG00000035319	RRP1B	61	50.794	Pan_paniscus
ENSOMEG00000016910	-	56	55.556	ENSPPRG00000010356	RRP1B	61	55.556	Panthera_pardus
ENSOMEG00000016910	-	52	53.933	ENSPTIG00000016894	RRP1B	67	55.556	Panthera_tigris_altaica
ENSOMEG00000016910	-	65	46.113	ENSPTRG00000013958	RRP1B	64	51.587	Pan_troglodytes
ENSOMEG00000016910	-	100	35.476	ENSPANG00000011090	RRP1B	69	44.772	Papio_anubis
ENSOMEG00000016910	-	99	37.515	ENSPSIG00000008152	RRP1B	60	50.541	Pelodiscus_sinensis
ENSOMEG00000016910	-	51	41.289	ENSPEMG00000018421	Rrp1	87	42.365	Peromyscus_maniculatus_bairdii
ENSOMEG00000016910	-	57	47.857	ENSPEMG00000022490	Rrp1b	66	46.429	Peromyscus_maniculatus_bairdii
ENSOMEG00000016910	-	61	50.943	ENSPCIG00000015513	RRP1B	66	56.790	Phascolarctos_cinereus
ENSOMEG00000016910	-	100	47.520	ENSPFOG00000007424	-	71	64.615	Poecilia_formosa
ENSOMEG00000016910	-	89	44.928	ENSPLAG00000016684	-	55	65.803	Poecilia_latipinna
ENSOMEG00000016910	-	58	50.794	ENSPPYG00000011470	RRP1B	64	50.794	Pongo_abelii
ENSOMEG00000016910	-	51	55.914	ENSPCAG00000013723	RRP1B	58	55.914	Procavia_capensis
ENSOMEG00000016910	-	56	58.025	ENSPCOG00000017927	RRP1B	69	47.887	Propithecus_coquereli
ENSOMEG00000016910	-	60	41.781	ENSPVAG00000001436	RRP1B	67	44.595	Pteropus_vampyrus
ENSOMEG00000016910	-	55	57.303	ENSRNOG00000001194	Rrp1b	64	48.000	Rattus_norvegicus
ENSOMEG00000016910	-	100	34.446	ENSRBIG00000041689	RRP1B	68	40.909	Rhinopithecus_bieti
ENSOMEG00000016910	-	100	36.975	ENSRROG00000031499	RRP1B	69	44.533	Rhinopithecus_roxellana
ENSOMEG00000016910	-	51	56.790	ENSSBOG00000034727	RRP1B	63	49.206	Saimiri_boliviensis_boliviensis
ENSOMEG00000016910	-	56	49.008	ENSSHAG00000017789	RRP1B	71	47.028	Sarcophilus_harrisii
ENSOMEG00000016910	-	75	66.067	ENSSMAG00000016847	-	92	63.117	Scophthalmus_maximus
ENSOMEG00000016910	-	62	65.617	ENSSDUG00000000551	-	70	66.250	Seriola_dumerili
ENSOMEG00000016910	-	57	69.681	ENSSLDG00000002538	-	66	67.347	Seriola_lalandi_dorsalis
ENSOMEG00000016910	-	53	42.403	ENSSARG00000003108	-	53	55.556	Sorex_araneus
ENSOMEG00000016910	-	59	68.085	ENSSPAG00000005370	-	68	64.548	Stegastes_partitus
ENSOMEG00000016910	-	58	53.571	ENSSSCG00000021698	RRP1B	67	53.571	Sus_scrofa
ENSOMEG00000016910	-	52	77.358	ENSTNIG00000005053	rrp1	65	83.333	Tetraodon_nigroviridis
ENSOMEG00000016910	-	78	42.623	ENSTBEG00000000422	RRP1B	83	42.077	Tupaia_belangeri
ENSOMEG00000016910	-	56	50.633	ENSTTRG00000000723	RRP1B	61	50.633	Tursiops_truncatus
ENSOMEG00000016910	-	56	55.556	ENSUAMG00000026765	RRP1B	65	55.556	Ursus_americanus
ENSOMEG00000016910	-	52	53.933	ENSUMAG00000025510	RRP1B	78	55.556	Ursus_maritimus
ENSOMEG00000016910	-	95	35.058	ENSVVUG00000024509	RRP1B	63	46.774	Vulpes_vulpes
ENSOMEG00000016910	-	53	58.182	ENSXETG00000013683	rrp1b	65	58.182	Xenopus_tropicalis
ENSOMEG00000016910	-	68	63.119	ENSXMAG00000023123	-	62	63.614	Xiphophorus_maculatus