EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000017142 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 5300 bases
Position: chrNVQA01000004.1:14985531-14990830
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000015555	RVT_1	PF00078.27	1.3e-48	1	1
ENSOMEP00000015555	Exo_endo_phos	PF03372.23	5.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000023758	-	5300	-	ENSOMEP00000015555	1573 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000017142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000017142's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000017142	-	53	31.047	ENSOMEG00000007525	-	89	31.047
ENSOMEG00000017142	-	59	30.602	ENSOMEG00000013089	-	91	30.448
ENSOMEG00000017142	-	59	30.602	ENSOMEG00000004858	-	91	30.448

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000017142	-	50	41.533	ENSACLG00000005158	-	97	40.894	Astatotilapia_calliptera
ENSOMEG00000017142	-	62	48.057	ENSORLG00000025871	-	80	47.955	Oryzias_latipes
ENSOMEG00000017142	-	54	47.121	ENSORLG00020022681	-	100	47.004	Oryzias_latipes_hni
ENSOMEG00000017142	-	62	45.918	ENSORLG00020009374	-	98	45.816	Oryzias_latipes_hni