EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000017258 (Gene tree)
Gene ID: 112142243
Gene Symbol: RAB41
Alias: -
Full Name: ras-related protein Rab-6B-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 12387 bases
Position: chrNVQA01000005.1:12329126-12341512
Accession: 112142243
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000015624	MMR_HSR1	PF01926.23	7.8e-05	1	1
ENSOMEP00000032020	MMR_HSR1	PF01926.23	8.1e-05	1	1
ENSOMEP00000032048	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000023830	RAB41-201	939	-	ENSOMEP00000032020	211 (aa)	XP_024121291	UPI000CF7E82B
ENSOMET00000034086	RAB41-203	4533	-	ENSOMEP00000032048	211 (aa)	XP_024121288	UPI000CF7B97F
ENSOMET00000023863	RAB41-202	939	-	ENSOMEP00000015624	211 (aa)	XP_024121290	UPI000CF8245D

Gene Model

Click here to download ENSOMEG00000017258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000017258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000017258	RAB41	83	30.508	ENSOMEG00000011584	pth2r	68	32.099
ENSOMEG00000017258	RAB41	72	39.241	ENSOMEG00000021726	-	66	38.608
ENSOMEG00000017258	RAB41	74	32.051	ENSOMEG00000008576	rabl2	70	32.051
ENSOMEG00000017258	RAB41	81	31.818	ENSOMEG00000000336	RAB29	87	31.818
ENSOMEG00000017258	RAB41	69	39.726	ENSOMEG00000001706	rab23	74	40.132
ENSOMEG00000017258	RAB41	82	42.529	ENSOMEG00000023078	rab5c	77	43.114
ENSOMEG00000017258	RAB41	94	40.594	ENSOMEG00000010692	rab5aa	89	41.451
ENSOMEG00000017258	RAB41	98	87.440	ENSOMEG00000023625	rab6bb	98	88.177
ENSOMEG00000017258	RAB41	74	32.911	ENSOMEG00000011273	kras	83	32.911
ENSOMEG00000017258	RAB41	88	35.204	ENSOMEG00000008327	rab9b	84	36.022
ENSOMEG00000017258	RAB41	98	90.821	ENSOMEG00000004379	-	98	91.626
ENSOMEG00000017258	RAB41	89	31.068	ENSOMEG00000019923	rasl11a	79	30.693
ENSOMEG00000017258	RAB41	75	39.506	ENSOMEG00000023716	opn1sw2	79	39.506
ENSOMEG00000017258	RAB41	84	33.889	ENSOMEG00000009463	rhebl1	97	33.889
ENSOMEG00000017258	RAB41	74	38.217	ENSOMEG00000017806	-	72	38.217
ENSOMEG00000017258	RAB41	74	38.217	ENSOMEG00000002581	rab11ba	72	38.217
ENSOMEG00000017258	RAB41	93	32.995	ENSOMEG00000020350	rab25b	97	32.990
ENSOMEG00000017258	RAB41	93	39.409	ENSOMEG00000017306	rab33a	73	39.409
ENSOMEG00000017258	RAB41	92	36.000	ENSOMEG00000010156	-	96	36.000
ENSOMEG00000017258	RAB41	75	37.059	ENSOMEG00000000162	rab9a	83	37.059
ENSOMEG00000017258	RAB41	94	35.577	ENSOMEG00000017881	-	98	35.577
ENSOMEG00000017258	RAB41	74	33.544	ENSOMEG00000018719	hrasb	83	33.544
ENSOMEG00000017258	RAB41	96	90.640	ENSOMEG00000014206	rab6ba	98	90.640
ENSOMEG00000017258	RAB41	68	37.241	ENSOMEG00000011161	RAP2B	95	37.241
ENSOMEG00000017258	RAB41	76	37.427	ENSOMEG00000009701	RAB9A	84	37.427
ENSOMEG00000017258	RAB41	92	38.265	ENSOMEG00000006036	rab1ab	96	38.265
ENSOMEG00000017258	RAB41	76	36.646	ENSOMEG00000020271	rab11al	75	36.646
ENSOMEG00000017258	RAB41	82	32.584	ENSOMEG00000000343	rras	90	32.584
ENSOMEG00000017258	RAB41	77	41.520	ENSOMEG00000017958	si:dkey-34d22.5	77	41.520
ENSOMEG00000017258	RAB41	79	39.181	ENSOMEG00000020605	rab18a	83	39.181
ENSOMEG00000017258	RAB41	73	39.490	ENSOMEG00000020418	rab42a	72	39.490
ENSOMEG00000017258	RAB41	74	38.217	ENSOMEG00000002562	-	72	38.217
ENSOMEG00000017258	RAB41	91	35.922	ENSOMEG00000020594	zgc:171927	96	35.922
ENSOMEG00000017258	RAB41	75	38.509	ENSOMEG00000010334	rab34b	66	38.509
ENSOMEG00000017258	RAB41	75	38.509	ENSOMEG00000003647	rab34a	53	38.509
ENSOMEG00000017258	RAB41	59	31.746	ENSOMEG00000004308	arl4d	62	31.746
ENSOMEG00000017258	RAB41	92	38.308	ENSOMEG00000009074	-	96	38.308
ENSOMEG00000017258	RAB41	92	38.191	ENSOMEG00000016752	rab2a	91	38.191
ENSOMEG00000017258	RAB41	79	41.520	ENSOMEG00000007546	rab18b	83	41.520
ENSOMEG00000017258	RAB41	74	42.675	ENSOMEG00000019462	RAB15	75	42.675
ENSOMEG00000017258	RAB41	73	38.961	ENSOMEG00000015474	si:dkey-16l2.16	74	38.961
ENSOMEG00000017258	RAB41	70	42.953	ENSOMEG00000013128	zgc:101559	64	42.953
ENSOMEG00000017258	RAB41	76	37.888	ENSOMEG00000010510	rab25a	77	37.888
ENSOMEG00000017258	RAB41	92	36.000	ENSOMEG00000017263	-	96	36.000
ENSOMEG00000017258	RAB41	74	36.943	ENSOMEG00000017467	rab11a	73	36.943
ENSOMEG00000017258	RAB41	81	34.302	ENSOMEG00000013685	rheb	93	34.302
ENSOMEG00000017258	RAB41	90	38.947	ENSOMEG00000022002	rab15	87	38.947
ENSOMEG00000017258	RAB41	75	44.937	ENSOMEG00000008210	rab13	79	44.937
ENSOMEG00000017258	RAB41	76	42.857	ENSOMEG00000001613	rab30	79	42.857
ENSOMEG00000017258	RAB41	74	32.911	ENSOMEG00000016685	zgc:55558	84	32.911
ENSOMEG00000017258	RAB41	70	42.282	ENSOMEG00000019819	rab33ba	63	42.282
ENSOMEG00000017258	RAB41	75	40.506	ENSOMEG00000003623	rab14	73	40.506
ENSOMEG00000017258	RAB41	75	41.139	ENSOMEG00000009290	-	73	41.139
ENSOMEG00000017258	RAB41	77	44.172	ENSOMEG00000018494	-	67	44.172
ENSOMEG00000017258	RAB41	74	39.623	ENSOMEG00000006333	RAB39B	98	33.654
ENSOMEG00000017258	RAB41	73	40.385	ENSOMEG00000008191	rab12	66	38.994

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000017258	RAB41	100	99.052	ENSACIG00000010914	RAB41	100	99.052	Amphilophus_citrinellus
ENSOMEG00000017258	RAB41	100	99.052	ENSAOCG00000022426	RAB41	100	99.052	Amphiprion_ocellaris
ENSOMEG00000017258	RAB41	100	99.052	ENSAPEG00000007931	RAB41	100	99.052	Amphiprion_percula
ENSOMEG00000017258	RAB41	94	70.707	ENSTSYG00000000768	RAB41	87	70.707	Carlito_syrichta
ENSOMEG00000017258	RAB41	93	67.005	ENSCATG00000037380	RAB41	87	67.005	Cercocebus_atys
ENSOMEG00000017258	RAB41	100	95.261	ENSCPBG00000014340	RAB41	96	97.537	Chrysemys_picta_bellii
ENSOMEG00000017258	RAB41	100	99.052	ENSFHEG00000015996	RAB41	100	99.052	Fundulus_heteroclitus
ENSOMEG00000017258	RAB41	100	99.052	ENSHBUG00000014338	RAB41	100	99.052	Haplochromis_burtoni
ENSOMEG00000017258	RAB41	100	99.052	ENSLBEG00000008746	RAB41	100	99.052	Labrus_bergylta
ENSOMEG00000017258	RAB41	93	68.528	ENSMFAG00000000762	RAB41	87	68.528	Macaca_fascicularis
ENSOMEG00000017258	RAB41	93	68.528	ENSMMUG00000013937	RAB41	87	68.528	Macaca_mulatta
ENSOMEG00000017258	RAB41	93	68.020	ENSMNEG00000045569	RAB41	87	68.020	Macaca_nemestrina
ENSOMEG00000017258	RAB41	91	67.358	ENSMLEG00000038149	RAB41	86	67.358	Mandrillus_leucophaeus
ENSOMEG00000017258	RAB41	100	98.585	ENSONIG00000002774	RAB41	100	98.585	Oreochromis_niloticus
ENSOMEG00000017258	RAB41	100	99.052	ENSORLG00000027669	RAB41	100	99.052	Oryzias_latipes
ENSOMEG00000017258	RAB41	100	99.052	ENSORLG00015010161	RAB41	100	99.052	Oryzias_latipes_hsok
ENSOMEG00000017258	RAB41	93	68.020	ENSPANG00000007317	RAB41	87	68.020	Papio_anubis
ENSOMEG00000017258	RAB41	99	96.172	ENSPKIG00000014618	-	99	96.172	Paramormyrops_kingsleyae
ENSOMEG00000017258	RAB41	100	99.052	ENSPMGG00000017830	RAB41	100	99.052	Periophthalmus_magnuspinnatus
ENSOMEG00000017258	RAB41	100	99.052	ENSPFOG00000011424	RAB41	100	99.052	Poecilia_formosa
ENSOMEG00000017258	RAB41	100	99.052	ENSPREG00000009535	RAB41	100	99.052	Poecilia_reticulata
ENSOMEG00000017258	RAB41	93	68.528	ENSRBIG00000027991	RAB41	87	68.528	Rhinopithecus_bieti
ENSOMEG00000017258	RAB41	99	98.086	ENSSFOG00015011268	RAB41	99	98.086	Scleropages_formosus
ENSOMEG00000017258	RAB41	100	97.196	ENSTNIG00000016831	RAB41	100	97.196	Tetraodon_nigroviridis
ENSOMEG00000017258	RAB41	100	94.787	ENSXETG00000030938	rab41	96	97.044	Xenopus_tropicalis
ENSOMEG00000017258	RAB41	100	99.052	ENSXCOG00000015802	RAB41	100	99.052	Xiphophorus_couchianus
ENSOMEG00000017258	RAB41	100	99.052	ENSXMAG00000027787	RAB41	100	99.052	Xiphophorus_maculatus