EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000017344 (Gene tree)
Gene ID: 112159762
Gene Symbol: sall4
Alias: -
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 6803 bases
Position: chrNVQA01000024.1:26797372-26804174
Accession: 112159762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000032103	zf-C2H2	PF00096.26	8.8e-32	1	6
ENSOMEP00000032103	zf-C2H2	PF00096.26	8.8e-32	2	6
ENSOMEP00000032103	zf-C2H2	PF00096.26	8.8e-32	3	6
ENSOMEP00000032103	zf-C2H2	PF00096.26	8.8e-32	4	6
ENSOMEP00000032103	zf-C2H2	PF00096.26	8.8e-32	5	6
ENSOMEP00000032103	zf-C2H2	PF00096.26	8.8e-32	6	6
ENSOMEP00000032103	zf-met	PF12874.7	7e-15	1	2
ENSOMEP00000032103	zf-met	PF12874.7	7e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000023994	-	4958	XM_024294020	ENSOMEP00000032103	1066 (aa)	XP_024149788	UPI000CF7F1D1

Gene Model

Click here to download ENSOMEG00000017344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000017344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000017344	sall4	93	73.786	ENSOMEG00000011390	sall3a	88	61.538
ENSOMEG00000017344	sall4	56	42.593	ENSOMEG00000023652	-	89	42.593
ENSOMEG00000017344	sall4	94	65.385	ENSOMEG00000016043	sall1a	90	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000017344	sall4	100	43.284	ENSG00000101115	SALL4	100	53.333	Homo_sapiens
ENSOMEG00000017344	sall4	100	78.361	ENSAPOG00000002465	sall4	100	77.716	Acanthochromis_polyacanthus
ENSOMEG00000017344	sall4	100	43.883	ENSAMEG00000013250	-	99	45.421	Ailuropoda_melanoleuca
ENSOMEG00000017344	sall4	100	75.967	ENSACIG00000017298	sall4	100	75.322	Amphilophus_citrinellus
ENSOMEG00000017344	sall4	100	79.190	ENSAOCG00000023678	sall4	100	78.545	Amphiprion_ocellaris
ENSOMEG00000017344	sall4	100	79.374	ENSAPEG00000000751	sall4	100	78.729	Amphiprion_percula
ENSOMEG00000017344	sall4	100	78.073	ENSATEG00000024480	sall4	100	77.339	Anabas_testudineus
ENSOMEG00000017344	sall4	99	51.051	ENSAPLG00000006498	SALL4	100	51.712	Anas_platyrhynchos
ENSOMEG00000017344	sall4	100	51.045	ENSACAG00000012748	SALL4	100	51.481	Anolis_carolinensis
ENSOMEG00000017344	sall4	100	43.866	ENSANAG00000023352	SALL4	100	44.120	Aotus_nancymaae
ENSOMEG00000017344	sall4	100	76.476	ENSACLG00000017851	sall4	100	76.015	Astatotilapia_calliptera
ENSOMEG00000017344	sall4	99	64.452	ENSAMXG00000001254	sall4	99	64.804	Astyanax_mexicanus
ENSOMEG00000017344	sall4	100	43.608	ENSBTAG00000003101	SALL4	100	43.870	Bos_taurus
ENSOMEG00000017344	sall4	80	46.128	ENSCJAG00000000591	SALL4	97	45.903	Callithrix_jacchus
ENSOMEG00000017344	sall4	100	44.298	ENSCAFG00000011738	-	100	44.562	Canis_familiaris
ENSOMEG00000017344	sall4	100	44.386	ENSCAFG00020021870	SALL4	100	44.651	Canis_lupus_dingo
ENSOMEG00000017344	sall4	100	43.105	ENSCHIG00000026270	SALL4	100	43.663	Capra_hircus
ENSOMEG00000017344	sall4	100	42.895	ENSTSYG00000007359	SALL4	100	51.667	Carlito_syrichta
ENSOMEG00000017344	sall4	98	43.784	ENSCAPG00000012135	SALL4	97	44.059	Cavia_aperea
ENSOMEG00000017344	sall4	100	40.248	ENSCCAG00000029512	-	100	60.784	Cebus_capucinus
ENSOMEG00000017344	sall4	100	43.827	ENSCATG00000030757	SALL4	100	44.004	Cercocebus_atys
ENSOMEG00000017344	sall4	100	44.209	ENSCLAG00000010479	SALL4	100	44.046	Chinchilla_lanigera
ENSOMEG00000017344	sall4	100	43.877	ENSCSAG00000015269	SALL4	100	44.053	Chlorocebus_sabaeus
ENSOMEG00000017344	sall4	99	51.010	ENSCPBG00000014995	SALL4	99	51.366	Chrysemys_picta_bellii
ENSOMEG00000017344	sall4	100	43.739	ENSCANG00000036463	SALL4	100	43.651	Colobus_angolensis_palliatus
ENSOMEG00000017344	sall4	63	54.187	ENSCGRG00001019569	Sall4	100	52.252	Cricetulus_griseus_chok1gshd
ENSOMEG00000017344	sall4	63	54.187	ENSCGRG00000000462	Sall4	99	79.012	Cricetulus_griseus_crigri
ENSOMEG00000017344	sall4	100	76.095	ENSCSEG00000014604	sall4	100	75.730	Cynoglossus_semilaevis
ENSOMEG00000017344	sall4	100	77.932	ENSCVAG00000010815	sall4	100	77.932	Cyprinodon_variegatus
ENSOMEG00000017344	sall4	99	63.751	ENSDARG00000044485	sall4	99	63.481	Danio_rerio
ENSOMEG00000017344	sall4	100	44.668	ENSDNOG00000040633	SALL4	100	44.930	Dasypus_novemcinctus
ENSOMEG00000017344	sall4	100	41.956	ENSDORG00000012841	Sall4	100	77.027	Dipodomys_ordii
ENSOMEG00000017344	sall4	73	57.778	ENSETEG00000012475	-	63	57.778	Echinops_telfairi
ENSOMEG00000017344	sall4	100	44.552	ENSECAG00000018533	SALL4	100	44.581	Equus_caballus
ENSOMEG00000017344	sall4	100	43.301	ENSEEUG00000003649	SALL4	99	42.565	Erinaceus_europaeus
ENSOMEG00000017344	sall4	100	64.539	ENSELUG00000005696	sall4	100	64.436	Esox_lucius
ENSOMEG00000017344	sall4	100	43.679	ENSFCAG00000002822	SALL4	100	43.658	Felis_catus
ENSOMEG00000017344	sall4	100	50.219	ENSFALG00000013149	SALL4	100	50.741	Ficedula_albicollis
ENSOMEG00000017344	sall4	100	42.581	ENSFDAG00000017812	SALL4	100	42.408	Fukomys_damarensis
ENSOMEG00000017344	sall4	100	76.682	ENSFHEG00000014187	sall4	100	76.682	Fundulus_heteroclitus
ENSOMEG00000017344	sall4	100	69.294	ENSGMOG00000003822	sall4	100	69.753	Gadus_morhua
ENSOMEG00000017344	sall4	100	51.748	ENSGALG00000041365	SALL4	100	52.109	Gallus_gallus
ENSOMEG00000017344	sall4	100	77.491	ENSGAFG00000019925	sall4	100	77.491	Gambusia_affinis
ENSOMEG00000017344	sall4	100	72.785	ENSGACG00000011124	sall4	100	72.329	Gasterosteus_aculeatus
ENSOMEG00000017344	sall4	99	50.000	ENSGAGG00000002297	SALL4	99	51.192	Gopherus_agassizii
ENSOMEG00000017344	sall4	100	43.501	ENSGGOG00000001832	SALL4	100	44.120	Gorilla_gorilla
ENSOMEG00000017344	sall4	100	76.568	ENSHBUG00000007327	sall4	100	76.107	Haplochromis_burtoni
ENSOMEG00000017344	sall4	98	43.510	ENSHGLG00000009043	SALL4	97	43.510	Heterocephalus_glaber_female
ENSOMEG00000017344	sall4	98	43.510	ENSHGLG00100002722	SALL4	97	43.510	Heterocephalus_glaber_male
ENSOMEG00000017344	sall4	100	74.288	ENSHCOG00000008519	sall4	100	73.737	Hippocampus_comes
ENSOMEG00000017344	sall4	99	62.613	ENSIPUG00000019170	sall4	99	62.613	Ictalurus_punctatus
ENSOMEG00000017344	sall4	62	54.634	ENSSTOG00000025002	SALL4	100	84.507	Ictidomys_tridecemlineatus
ENSOMEG00000017344	sall4	100	44.974	ENSJJAG00000020688	Sall4	99	85.915	Jaculus_jaculus
ENSOMEG00000017344	sall4	100	80.517	ENSKMAG00000002501	sall4	100	80.517	Kryptolebias_marmoratus
ENSOMEG00000017344	sall4	100	75.458	ENSLBEG00000019951	sall4	100	74.634	Labrus_bergylta
ENSOMEG00000017344	sall4	96	47.432	ENSLACG00000013898	SALL4	99	60.209	Latimeria_chalumnae
ENSOMEG00000017344	sall4	100	61.692	ENSLOCG00000002427	sall4	100	61.879	Lepisosteus_oculatus
ENSOMEG00000017344	sall4	100	44.961	ENSLAFG00000004309	SALL4	100	44.785	Loxodonta_africana
ENSOMEG00000017344	sall4	100	43.739	ENSMFAG00000027169	SALL4	100	44.180	Macaca_fascicularis
ENSOMEG00000017344	sall4	86	45.464	ENSMMUG00000003870	SALL4	100	56.158	Macaca_mulatta
ENSOMEG00000017344	sall4	86	45.464	ENSMNEG00000035995	SALL4	71	67.308	Macaca_nemestrina
ENSOMEG00000017344	sall4	100	43.827	ENSMLEG00000030467	SALL4	100	44.004	Mandrillus_leucophaeus
ENSOMEG00000017344	sall4	100	77.293	ENSMAMG00000005223	sall4	100	76.748	Mastacembelus_armatus
ENSOMEG00000017344	sall4	100	76.476	ENSMZEG00005023418	sall4	100	76.015	Maylandia_zebra
ENSOMEG00000017344	sall4	74	63.462	ENSMGAG00000009344	SALL4	100	63.462	Meleagris_gallopavo
ENSOMEG00000017344	sall4	100	42.870	ENSMAUG00000015814	Sall4	99	75.904	Mesocricetus_auratus
ENSOMEG00000017344	sall4	100	43.160	ENSMICG00000000027	SALL4	83	67.308	Microcebus_murinus
ENSOMEG00000017344	sall4	100	43.045	ENSMOCG00000018245	Sall4	100	83.562	Microtus_ochrogaster
ENSOMEG00000017344	sall4	100	77.348	ENSMMOG00000014929	sall4	100	77.072	Mola_mola
ENSOMEG00000017344	sall4	99	46.834	ENSMODG00000016387	SALL4	97	46.794	Monodelphis_domestica
ENSOMEG00000017344	sall4	100	78.807	ENSMALG00000018709	sall4	100	78.742	Monopterus_albus
ENSOMEG00000017344	sall4	100	41.848	MGP_CAROLIEiJ_G0024723	Sall4	99	86.111	Mus_caroli
ENSOMEG00000017344	sall4	100	42.073	ENSMUSG00000027547	Sall4	99	86.111	Mus_musculus
ENSOMEG00000017344	sall4	100	41.314	MGP_PahariEiJ_G0026164	Sall4	99	86.111	Mus_pahari
ENSOMEG00000017344	sall4	100	41.899	MGP_SPRETEiJ_G0025643	Sall4	99	86.111	Mus_spretus
ENSOMEG00000017344	sall4	100	43.409	ENSMPUG00000017543	SALL4	96	43.750	Mustela_putorius_furo
ENSOMEG00000017344	sall4	99	32.159	ENSMLUG00000028073	-	99	31.732	Myotis_lucifugus
ENSOMEG00000017344	sall4	100	41.000	ENSMLUG00000008405	-	100	41.000	Myotis_lucifugus
ENSOMEG00000017344	sall4	97	43.930	ENSMLUG00000007060	-	99	43.744	Myotis_lucifugus
ENSOMEG00000017344	sall4	100	42.832	ENSNGAG00000017833	Sall4	94	67.308	Nannospalax_galili
ENSOMEG00000017344	sall4	100	76.313	ENSNBRG00000001829	sall4	100	76.313	Neolamprologus_brichardi
ENSOMEG00000017344	sall4	100	43.286	ENSNLEG00000007013	SALL4	100	43.640	Nomascus_leucogenys
ENSOMEG00000017344	sall4	84	63.462	ENSMEUG00000005793	-	99	63.462	Notamacropus_eugenii
ENSOMEG00000017344	sall4	100	43.855	ENSOPRG00000011640	SALL4	100	43.778	Ochotona_princeps
ENSOMEG00000017344	sall4	100	77.327	ENSONIG00000016557	sall4	100	77.419	Oreochromis_niloticus
ENSOMEG00000017344	sall4	99	52.224	ENSOANG00000008667	SALL4	97	52.460	Ornithorhynchus_anatinus
ENSOMEG00000017344	sall4	97	45.634	ENSOCUG00000011797	SALL4	99	45.548	Oryctolagus_cuniculus
ENSOMEG00000017344	sall4	100	92.228	ENSORLG00000016130	sall4	100	92.228	Oryzias_latipes
ENSOMEG00000017344	sall4	100	92.509	ENSORLG00020007339	sall4	100	92.509	Oryzias_latipes_hni
ENSOMEG00000017344	sall4	100	92.790	ENSORLG00015002265	sall4	100	92.790	Oryzias_latipes_hsok
ENSOMEG00000017344	sall4	97	44.805	ENSOGAG00000013799	SALL4	99	44.805	Otolemur_garnettii
ENSOMEG00000017344	sall4	100	41.879	ENSOARG00000014570	SALL4	100	42.091	Ovis_aries
ENSOMEG00000017344	sall4	100	43.635	ENSPPAG00000038064	SALL4	100	43.723	Pan_paniscus
ENSOMEG00000017344	sall4	100	43.679	ENSPPRG00000008677	SALL4	100	43.539	Panthera_pardus
ENSOMEG00000017344	sall4	100	43.459	ENSPTRG00000013631	SALL4	100	43.810	Pan_troglodytes
ENSOMEG00000017344	sall4	86	45.464	ENSPANG00000021792	SALL4	71	67.308	Papio_anubis
ENSOMEG00000017344	sall4	100	61.518	ENSPKIG00000007074	sall4	100	61.741	Paramormyrops_kingsleyae
ENSOMEG00000017344	sall4	99	50.873	ENSPSIG00000009066	SALL4	99	51.624	Pelodiscus_sinensis
ENSOMEG00000017344	sall4	100	66.543	ENSPMGG00000022551	sall4	100	67.131	Periophthalmus_magnuspinnatus
ENSOMEG00000017344	sall4	100	42.606	ENSPEMG00000022706	Sall4	99	86.111	Peromyscus_maniculatus_bairdii
ENSOMEG00000017344	sall4	99	48.477	ENSPCIG00000022838	SALL4	97	48.356	Phascolarctos_cinereus
ENSOMEG00000017344	sall4	100	77.399	ENSPFOG00000001442	sall4	100	77.399	Poecilia_formosa
ENSOMEG00000017344	sall4	100	77.306	ENSPLAG00000008760	sall4	100	77.306	Poecilia_latipinna
ENSOMEG00000017344	sall4	100	77.399	ENSPMEG00000008497	sall4	100	77.399	Poecilia_mexicana
ENSOMEG00000017344	sall4	100	77.030	ENSPREG00000021140	sall4	100	77.030	Poecilia_reticulata
ENSOMEG00000017344	sall4	100	43.513	ENSPPYG00000011138	SALL4	100	43.513	Pongo_abelii
ENSOMEG00000017344	sall4	100	41.652	ENSPCAG00000004726	SALL4	99	41.989	Procavia_capensis
ENSOMEG00000017344	sall4	100	42.971	ENSPCOG00000016321	SALL4	100	43.478	Propithecus_coquereli
ENSOMEG00000017344	sall4	94	43.032	ENSPVAG00000002075	SALL4	94	43.409	Pteropus_vampyrus
ENSOMEG00000017344	sall4	100	76.292	ENSPNYG00000021738	sall4	100	75.830	Pundamilia_nyererei
ENSOMEG00000017344	sall4	99	65.787	ENSPNAG00000020929	sall4	99	66.060	Pygocentrus_nattereri
ENSOMEG00000017344	sall4	100	42.832	ENSRNOG00000050035	Sall4	100	43.269	Rattus_norvegicus
ENSOMEG00000017344	sall4	100	43.651	ENSRBIG00000039876	SALL4	100	43.474	Rhinopithecus_bieti
ENSOMEG00000017344	sall4	100	43.651	ENSRROG00000036585	SALL4	100	43.651	Rhinopithecus_roxellana
ENSOMEG00000017344	sall4	100	44.211	ENSSBOG00000030011	SALL4	100	43.574	Saimiri_boliviensis_boliviensis
ENSOMEG00000017344	sall4	94	62.437	ENSSHAG00000018013	SALL4	88	65.385	Sarcophilus_harrisii
ENSOMEG00000017344	sall4	100	62.285	ENSSFOG00015021075	sall4	100	62.150	Scleropages_formosus
ENSOMEG00000017344	sall4	100	77.676	ENSSMAG00000019218	sall4	99	77.493	Scophthalmus_maximus
ENSOMEG00000017344	sall4	100	79.762	ENSSDUG00000004657	sall4	100	79.579	Seriola_dumerili
ENSOMEG00000017344	sall4	100	78.755	ENSSLDG00000004973	sall4	100	79.212	Seriola_lalandi_dorsalis
ENSOMEG00000017344	sall4	100	79.466	ENSSPAG00000001978	sall4	100	79.282	Stegastes_partitus
ENSOMEG00000017344	sall4	100	43.712	ENSSSCG00000007479	SALL4	100	43.345	Sus_scrofa
ENSOMEG00000017344	sall4	100	75.506	ENSTRUG00000007410	sall4	100	74.770	Takifugu_rubripes
ENSOMEG00000017344	sall4	100	73.519	ENSTNIG00000012460	sall4	100	73.339	Tetraodon_nigroviridis
ENSOMEG00000017344	sall4	97	41.475	ENSTTRG00000007753	SALL4	99	40.955	Tursiops_truncatus
ENSOMEG00000017344	sall4	100	43.678	ENSUAMG00000010113	SALL4	100	44.021	Ursus_americanus
ENSOMEG00000017344	sall4	97	43.889	ENSUMAG00000024274	SALL4	98	43.889	Ursus_maritimus
ENSOMEG00000017344	sall4	100	49.117	ENSXETG00000012326	sall4	100	49.057	Xenopus_tropicalis
ENSOMEG00000017344	sall4	100	69.890	ENSXCOG00000015467	sall4	100	69.890	Xiphophorus_couchianus
ENSOMEG00000017344	sall4	100	68.972	ENSXMAG00000012692	sall4	100	68.972	Xiphophorus_maculatus