EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000017354 (Gene tree)
Gene ID: 112160725
Gene Symbol: EDC3 (1 of many)
Alias: -
Full Name: enhancer of mRNA-decapping protein 3-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 20638 bases
Position: chrNVQA01000027.1:6761057-6781694
Accession: 112160725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000015737	FDF	PF09532.10	2.5e-08	1	1
ENSOMEP00000015737	LSM14	PF12701.7	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000024010	EDC3 (1 of many)-201	3327	-	ENSOMEP00000015737	470 (aa)	XP_024151253	UPI000CF7D0AD

Gene Model

Click here to download ENSOMEG00000017354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000017354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000017354	EDC3	100	63.900	ENSOMEG00000014026	edc3	100	63.900

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000017354	EDC3	100	57.031	ENSG00000179151	EDC3	100	74.074	Homo_sapiens
ENSOMEG00000017354	EDC3	100	69.715	ENSAPOG00000008655	EDC3	100	69.715	Acanthochromis_polyacanthus
ENSOMEG00000017354	EDC3	100	65.839	ENSAPOG00000010791	edc3	100	65.839	Acanthochromis_polyacanthus
ENSOMEG00000017354	EDC3	100	57.227	ENSAMEG00000008963	EDC3	100	57.227	Ailuropoda_melanoleuca
ENSOMEG00000017354	EDC3	100	64.596	ENSACIG00000017751	edc3	100	64.596	Amphilophus_citrinellus
ENSOMEG00000017354	EDC3	99	74.949	ENSACIG00000005330	EDC3	99	74.949	Amphilophus_citrinellus
ENSOMEG00000017354	EDC3	100	65.631	ENSAOCG00000005431	edc3	100	65.631	Amphiprion_ocellaris
ENSOMEG00000017354	EDC3	100	76.793	ENSAOCG00000009103	-	100	76.793	Amphiprion_ocellaris
ENSOMEG00000017354	EDC3	100	77.004	ENSAPEG00000007841	EDC3	100	77.004	Amphiprion_percula
ENSOMEG00000017354	EDC3	100	65.631	ENSAPEG00000000968	edc3	100	65.631	Amphiprion_percula
ENSOMEG00000017354	EDC3	100	65.839	ENSATEG00000015505	edc3	100	65.839	Anabas_testudineus
ENSOMEG00000017354	EDC3	100	76.471	ENSATEG00000004205	-	100	76.471	Anabas_testudineus
ENSOMEG00000017354	EDC3	75	65.537	ENSAPLG00000008957	EDC3	77	65.537	Anas_platyrhynchos
ENSOMEG00000017354	EDC3	76	53.133	ENSACAG00000000460	-	100	53.133	Anolis_carolinensis
ENSOMEG00000017354	EDC3	100	57.031	ENSANAG00000024078	EDC3	100	57.031	Aotus_nancymaae
ENSOMEG00000017354	EDC3	99	75.687	ENSACLG00000018776	-	99	75.687	Astatotilapia_calliptera
ENSOMEG00000017354	EDC3	100	64.596	ENSACLG00000007232	edc3	100	64.596	Astatotilapia_calliptera
ENSOMEG00000017354	EDC3	100	61.886	ENSAMXG00000001589	edc3	100	61.886	Astyanax_mexicanus
ENSOMEG00000017354	EDC3	100	56.836	ENSBTAG00000007308	EDC3	100	56.836	Bos_taurus
ENSOMEG00000017354	EDC3	100	57.031	ENSCJAG00000017681	EDC3	100	57.031	Callithrix_jacchus
ENSOMEG00000017354	EDC3	100	56.836	ENSCAFG00000017935	EDC3	100	56.836	Canis_familiaris
ENSOMEG00000017354	EDC3	100	56.836	ENSCAFG00020003909	EDC3	100	56.836	Canis_lupus_dingo
ENSOMEG00000017354	EDC3	100	57.031	ENSCHIG00000023658	EDC3	100	57.031	Capra_hircus
ENSOMEG00000017354	EDC3	100	56.836	ENSTSYG00000004822	EDC3	100	56.836	Carlito_syrichta
ENSOMEG00000017354	EDC3	100	57.031	ENSCPOG00000015595	EDC3	100	57.031	Cavia_porcellus
ENSOMEG00000017354	EDC3	100	56.836	ENSCCAG00000021663	EDC3	100	56.836	Cebus_capucinus
ENSOMEG00000017354	EDC3	100	56.641	ENSCATG00000037511	EDC3	100	56.641	Cercocebus_atys
ENSOMEG00000017354	EDC3	100	57.227	ENSCLAG00000005700	EDC3	100	57.227	Chinchilla_lanigera
ENSOMEG00000017354	EDC3	100	56.641	ENSCSAG00000014239	EDC3	100	56.641	Chlorocebus_sabaeus
ENSOMEG00000017354	EDC3	99	56.863	ENSCPBG00000024239	EDC3	99	56.863	Chrysemys_picta_bellii
ENSOMEG00000017354	EDC3	99	36.508	ENSCING00000022142	-	99	36.508	Ciona_intestinalis
ENSOMEG00000017354	EDC3	100	56.641	ENSCANG00000028699	EDC3	100	56.641	Colobus_angolensis_palliatus
ENSOMEG00000017354	EDC3	100	56.445	ENSCGRG00001013874	Edc3	100	56.445	Cricetulus_griseus_chok1gshd
ENSOMEG00000017354	EDC3	100	56.445	ENSCGRG00000011885	Edc3	100	56.445	Cricetulus_griseus_crigri
ENSOMEG00000017354	EDC3	99	65.696	ENSCSEG00000012996	edc3	99	65.696	Cynoglossus_semilaevis
ENSOMEG00000017354	EDC3	100	65.010	ENSCVAG00000008023	edc3	100	65.010	Cyprinodon_variegatus
ENSOMEG00000017354	EDC3	99	58.777	ENSDARG00000051931	edc3	99	59.961	Danio_rerio
ENSOMEG00000017354	EDC3	100	51.149	ENSDNOG00000030661	EDC3	100	51.149	Dasypus_novemcinctus
ENSOMEG00000017354	EDC3	70	74.074	ENSETEG00000002398	-	64	74.074	Echinops_telfairi
ENSOMEG00000017354	EDC3	100	57.227	ENSEASG00005005071	EDC3	100	57.227	Equus_asinus_asinus
ENSOMEG00000017354	EDC3	100	57.227	ENSECAG00000017994	EDC3	100	57.227	Equus_caballus
ENSOMEG00000017354	EDC3	100	65.966	ENSELUG00000007607	EDC3	100	65.966	Esox_lucius
ENSOMEG00000017354	EDC3	100	62.500	ENSELUG00000005794	edc3	100	62.500	Esox_lucius
ENSOMEG00000017354	EDC3	100	57.031	ENSFCAG00000002014	EDC3	100	57.031	Felis_catus
ENSOMEG00000017354	EDC3	98	54.890	ENSFALG00000004543	EDC3	96	54.890	Ficedula_albicollis
ENSOMEG00000017354	EDC3	100	57.227	ENSFDAG00000012582	EDC3	100	57.227	Fukomys_damarensis
ENSOMEG00000017354	EDC3	100	65.424	ENSFHEG00000009375	edc3	100	65.424	Fundulus_heteroclitus
ENSOMEG00000017354	EDC3	100	66.116	ENSGMOG00000002715	edc3	100	66.116	Gadus_morhua
ENSOMEG00000017354	EDC3	99	57.087	ENSGALG00000040181	EDC3	99	57.087	Gallus_gallus
ENSOMEG00000017354	EDC3	100	63.975	ENSGAFG00000014433	edc3	100	63.975	Gambusia_affinis
ENSOMEG00000017354	EDC3	100	64.803	ENSGACG00000009783	edc3	100	64.803	Gasterosteus_aculeatus
ENSOMEG00000017354	EDC3	99	66.860	ENSGACG00000014671	EDC3	99	67.653	Gasterosteus_aculeatus
ENSOMEG00000017354	EDC3	99	57.087	ENSGAGG00000023477	EDC3	99	57.087	Gopherus_agassizii
ENSOMEG00000017354	EDC3	100	57.031	ENSGGOG00000003552	EDC3	100	57.031	Gorilla_gorilla
ENSOMEG00000017354	EDC3	100	64.596	ENSHBUG00000003635	edc3	100	64.596	Haplochromis_burtoni
ENSOMEG00000017354	EDC3	99	75.899	ENSHBUG00000020817	EDC3	99	75.899	Haplochromis_burtoni
ENSOMEG00000017354	EDC3	100	63.542	ENSHCOG00000016834	edc3	100	63.958	Hippocampus_comes
ENSOMEG00000017354	EDC3	99	61.677	ENSIPUG00000005695	edc3	99	61.677	Ictalurus_punctatus
ENSOMEG00000017354	EDC3	100	56.641	ENSSTOG00000013936	EDC3	100	56.641	Ictidomys_tridecemlineatus
ENSOMEG00000017354	EDC3	100	57.031	ENSJJAG00000008074	Edc3	100	57.031	Jaculus_jaculus
ENSOMEG00000017354	EDC3	100	80.802	ENSKMAG00000001987	EDC3	100	80.802	Kryptolebias_marmoratus
ENSOMEG00000017354	EDC3	100	64.050	ENSKMAG00000001243	edc3	100	64.256	Kryptolebias_marmoratus
ENSOMEG00000017354	EDC3	100	76.360	ENSLBEG00000017984	EDC3	100	76.360	Labrus_bergylta
ENSOMEG00000017354	EDC3	100	64.389	ENSLBEG00000013435	edc3	99	64.389	Labrus_bergylta
ENSOMEG00000017354	EDC3	99	57.663	ENSLACG00000014149	EDC3	99	57.663	Latimeria_chalumnae
ENSOMEG00000017354	EDC3	99	57.576	ENSLOCG00000014625	edc3	99	57.884	Lepisosteus_oculatus
ENSOMEG00000017354	EDC3	100	56.947	ENSLAFG00000002992	EDC3	100	56.947	Loxodonta_africana
ENSOMEG00000017354	EDC3	100	56.445	ENSMFAG00000043074	EDC3	100	56.445	Macaca_fascicularis
ENSOMEG00000017354	EDC3	100	56.445	ENSMMUG00000011071	EDC3	100	56.445	Macaca_mulatta
ENSOMEG00000017354	EDC3	100	56.445	ENSMNEG00000035316	EDC3	100	56.445	Macaca_nemestrina
ENSOMEG00000017354	EDC3	100	56.641	ENSMLEG00000030372	EDC3	100	56.641	Mandrillus_leucophaeus
ENSOMEG00000017354	EDC3	100	64.315	ENSMAMG00000000505	edc3	100	64.315	Mastacembelus_armatus
ENSOMEG00000017354	EDC3	99	78.059	ENSMAMG00000005423	-	99	78.059	Mastacembelus_armatus
ENSOMEG00000017354	EDC3	100	64.389	ENSMZEG00005004892	edc3	100	64.389	Maylandia_zebra
ENSOMEG00000017354	EDC3	99	75.105	ENSMZEG00005005654	EDC3	99	75.105	Maylandia_zebra
ENSOMEG00000017354	EDC3	99	57.087	ENSMGAG00000002617	EDC3	99	57.087	Meleagris_gallopavo
ENSOMEG00000017354	EDC3	100	56.836	ENSMICG00000043190	EDC3	100	56.836	Microcebus_murinus
ENSOMEG00000017354	EDC3	100	56.055	ENSMOCG00000016205	Edc3	100	56.055	Microtus_ochrogaster
ENSOMEG00000017354	EDC3	99	65.281	ENSMMOG00000012278	edc3	99	65.281	Mola_mola
ENSOMEG00000017354	EDC3	99	56.863	ENSMODG00000009442	EDC3	99	56.863	Monodelphis_domestica
ENSOMEG00000017354	EDC3	100	64.315	ENSMALG00000008658	edc3	100	64.315	Monopterus_albus
ENSOMEG00000017354	EDC3	100	55.469	MGP_CAROLIEiJ_G0032280	Edc3	100	70.769	Mus_caroli
ENSOMEG00000017354	EDC3	100	55.469	ENSMUSG00000038957	Edc3	100	70.769	Mus_musculus
ENSOMEG00000017354	EDC3	100	55.469	MGP_PahariEiJ_G0015146	Edc3	100	70.769	Mus_pahari
ENSOMEG00000017354	EDC3	100	55.469	MGP_SPRETEiJ_G0033420	Edc3	100	70.769	Mus_spretus
ENSOMEG00000017354	EDC3	100	57.031	ENSMPUG00000017293	EDC3	100	57.031	Mustela_putorius_furo
ENSOMEG00000017354	EDC3	100	56.420	ENSMLUG00000016382	EDC3	100	56.420	Myotis_lucifugus
ENSOMEG00000017354	EDC3	100	56.445	ENSNGAG00000010923	Edc3	100	56.445	Nannospalax_galili
ENSOMEG00000017354	EDC3	100	64.389	ENSNBRG00000002434	edc3	100	64.389	Neolamprologus_brichardi
ENSOMEG00000017354	EDC3	99	74.792	ENSNBRG00000007881	EDC3	99	74.792	Neolamprologus_brichardi
ENSOMEG00000017354	EDC3	100	49.023	ENSNLEG00000014577	EDC3	100	49.023	Nomascus_leucogenys
ENSOMEG00000017354	EDC3	99	57.143	ENSMEUG00000009077	EDC3	99	57.143	Notamacropus_eugenii
ENSOMEG00000017354	EDC3	86	74.074	ENSOPRG00000009540	-	79	74.074	Ochotona_princeps
ENSOMEG00000017354	EDC3	99	70.760	ENSONIG00000002932	-	99	70.760	Oreochromis_niloticus
ENSOMEG00000017354	EDC3	100	64.803	ENSONIG00000008434	edc3	100	64.803	Oreochromis_niloticus
ENSOMEG00000017354	EDC3	76	53.750	ENSOCUG00000017740	EDC3	86	53.750	Oryctolagus_cuniculus
ENSOMEG00000017354	EDC3	100	94.280	ENSORLG00000014399	-	98	94.280	Oryzias_latipes
ENSOMEG00000017354	EDC3	100	63.636	ENSORLG00000004883	edc3	100	63.636	Oryzias_latipes
ENSOMEG00000017354	EDC3	100	93.856	ENSORLG00020019446	-	100	93.856	Oryzias_latipes_hni
ENSOMEG00000017354	EDC3	100	63.843	ENSORLG00020012262	edc3	100	63.843	Oryzias_latipes_hni
ENSOMEG00000017354	EDC3	100	63.636	ENSORLG00015005634	edc3	100	63.636	Oryzias_latipes_hsok
ENSOMEG00000017354	EDC3	100	93.856	ENSORLG00015017635	-	96	93.856	Oryzias_latipes_hsok
ENSOMEG00000017354	EDC3	100	55.859	ENSOGAG00000014441	EDC3	100	56.836	Otolemur_garnettii
ENSOMEG00000017354	EDC3	100	55.922	ENSOARG00000003476	EDC3	100	57.115	Ovis_aries
ENSOMEG00000017354	EDC3	100	57.031	ENSPPAG00000040143	EDC3	100	57.031	Pan_paniscus
ENSOMEG00000017354	EDC3	100	56.836	ENSPPRG00000006257	EDC3	100	56.836	Panthera_pardus
ENSOMEG00000017354	EDC3	100	56.836	ENSPTIG00000017424	EDC3	100	56.836	Panthera_tigris_altaica
ENSOMEG00000017354	EDC3	100	57.031	ENSPTRG00000007279	EDC3	100	57.031	Pan_troglodytes
ENSOMEG00000017354	EDC3	100	56.641	ENSPANG00000015997	EDC3	100	56.641	Papio_anubis
ENSOMEG00000017354	EDC3	100	62.475	ENSPKIG00000019810	EDC3	100	62.475	Paramormyrops_kingsleyae
ENSOMEG00000017354	EDC3	99	60.672	ENSPKIG00000004416	edc3	99	60.672	Paramormyrops_kingsleyae
ENSOMEG00000017354	EDC3	99	52.549	ENSPSIG00000008474	EDC3	99	53.529	Pelodiscus_sinensis
ENSOMEG00000017354	EDC3	100	64.033	ENSPMGG00000007223	edc3	100	64.033	Periophthalmus_magnuspinnatus
ENSOMEG00000017354	EDC3	100	56.445	ENSPEMG00000015260	Edc3	100	56.445	Peromyscus_maniculatus_bairdii
ENSOMEG00000017354	EDC3	99	57.227	ENSPCIG00000006276	EDC3	70	57.227	Phascolarctos_cinereus
ENSOMEG00000017354	EDC3	100	64.182	ENSPFOG00000012204	edc3	100	64.182	Poecilia_formosa
ENSOMEG00000017354	EDC3	100	64.182	ENSPLAG00000014420	edc3	100	64.182	Poecilia_latipinna
ENSOMEG00000017354	EDC3	100	64.182	ENSPMEG00000023289	edc3	100	64.182	Poecilia_mexicana
ENSOMEG00000017354	EDC3	100	63.071	ENSPREG00000016022	edc3	100	63.071	Poecilia_reticulata
ENSOMEG00000017354	EDC3	100	56.055	ENSPPYG00000006642	EDC3	100	56.055	Pongo_abelii
ENSOMEG00000017354	EDC3	87	74.074	ENSPCAG00000002802	EDC3	80	74.074	Procavia_capensis
ENSOMEG00000017354	EDC3	100	56.641	ENSPCOG00000013364	EDC3	100	56.641	Propithecus_coquereli
ENSOMEG00000017354	EDC3	100	56.055	ENSPVAG00000014733	EDC3	100	55.859	Pteropus_vampyrus
ENSOMEG00000017354	EDC3	99	75.899	ENSPNYG00000009669	EDC3	99	75.899	Pundamilia_nyererei
ENSOMEG00000017354	EDC3	100	64.596	ENSPNYG00000021797	edc3	100	64.596	Pundamilia_nyererei
ENSOMEG00000017354	EDC3	100	61.493	ENSPNAG00000019657	edc3	100	61.493	Pygocentrus_nattereri
ENSOMEG00000017354	EDC3	99	55.403	ENSRNOG00000019579	Edc3	99	56.385	Rattus_norvegicus
ENSOMEG00000017354	EDC3	100	56.641	ENSRBIG00000019488	EDC3	100	56.641	Rhinopithecus_bieti
ENSOMEG00000017354	EDC3	100	56.641	ENSRROG00000034959	EDC3	100	56.641	Rhinopithecus_roxellana
ENSOMEG00000017354	EDC3	100	56.836	ENSSBOG00000004896	EDC3	100	56.836	Saimiri_boliviensis_boliviensis
ENSOMEG00000017354	EDC3	96	55.263	ENSSHAG00000015075	EDC3	95	55.263	Sarcophilus_harrisii
ENSOMEG00000017354	EDC3	100	64.414	ENSSFOG00015016939	edc3	100	64.811	Scleropages_formosus
ENSOMEG00000017354	EDC3	100	65.678	ENSSFOG00015002439	edc3	100	65.678	Scleropages_formosus
ENSOMEG00000017354	EDC3	99	77.426	ENSSMAG00000010176	-	99	77.426	Scophthalmus_maximus
ENSOMEG00000017354	EDC3	100	64.803	ENSSMAG00000010695	edc3	100	64.803	Scophthalmus_maximus
ENSOMEG00000017354	EDC3	100	79.832	ENSSDUG00000007671	EDC3	100	79.832	Seriola_dumerili
ENSOMEG00000017354	EDC3	100	65.217	ENSSDUG00000021844	edc3	100	65.217	Seriola_dumerili
ENSOMEG00000017354	EDC3	100	65.217	ENSSLDG00000022046	edc3	100	65.217	Seriola_lalandi_dorsalis
ENSOMEG00000017354	EDC3	67	72.177	ENSSARG00000003907	EDC3	62	72.177	Sorex_araneus
ENSOMEG00000017354	EDC3	99	56.863	ENSSPUG00000008232	EDC3	99	56.863	Sphenodon_punctatus
ENSOMEG00000017354	EDC3	100	78.903	ENSSPAG00000020327	EDC3	100	78.903	Stegastes_partitus
ENSOMEG00000017354	EDC3	100	65.217	ENSSPAG00000010009	edc3	100	65.217	Stegastes_partitus
ENSOMEG00000017354	EDC3	100	59.664	ENSSSCG00000001903	EDC3	100	59.664	Sus_scrofa
ENSOMEG00000017354	EDC3	99	56.890	ENSTGUG00000004007	EDC3	99	56.890	Taeniopygia_guttata
ENSOMEG00000017354	EDC3	100	65.553	ENSTRUG00000017078	edc3	100	65.553	Takifugu_rubripes
ENSOMEG00000017354	EDC3	100	64.948	ENSTNIG00000016047	edc3	100	64.948	Tetraodon_nigroviridis
ENSOMEG00000017354	EDC3	100	57.143	ENSTTRG00000007990	EDC3	100	57.143	Tursiops_truncatus
ENSOMEG00000017354	EDC3	100	57.227	ENSUAMG00000026710	-	100	57.227	Ursus_americanus
ENSOMEG00000017354	EDC3	100	57.227	ENSUMAG00000005006	EDC3	96	57.227	Ursus_maritimus
ENSOMEG00000017354	EDC3	86	68.519	ENSVPAG00000003499	-	79	68.519	Vicugna_pacos
ENSOMEG00000017354	EDC3	100	57.031	ENSVVUG00000018601	EDC3	100	57.031	Vulpes_vulpes
ENSOMEG00000017354	EDC3	74	64.387	ENSXETG00000010622	edc3	99	65.341	Xenopus_tropicalis
ENSOMEG00000017354	EDC3	100	64.389	ENSXMAG00000007377	edc3	100	64.389	Xiphophorus_maculatus