EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000017536 (Gene tree)
Gene ID
112148183
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Plus strand
Length
21058 bases
Position
chrNVQA01000012.1:6527190-6548247
Accession
112148183
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000032186RRM_1PF00076.226.3e-3312
ENSOMEP00000032186RRM_1PF00076.226.3e-3322
ENSOMEP00000032204RRM_1PF00076.228.1e-3312
ENSOMEP00000032204RRM_1PF00076.228.1e-3322
ENSOMEP00000032212RRM_1PF00076.228.1e-3312
ENSOMEP00000032212RRM_1PF00076.228.1e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000024199MSI1-2032861-ENSOMEP00000032212349 (aa)-UPI000CF839BD
ENSOMET00000024150MSI1-201975-ENSOMEP00000032186324 (aa)--
ENSOMET00000024183MSI1-2022785XM_024275045ENSOMEP00000032204349 (aa)XP_024130813UPI000CF839BD
Gene Model
Click here to download ENSOMEG00000017536's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000017536's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000017536MSI15441.520ENSOMEG00000015959-5641.143
ENSOMEG00000017536MSI110091.453ENSOMEG00000002272-10091.453
ENSOMEG00000017536MSI16636.905ENSOMEG00000021030-7136.905
ENSOMEG00000017536MSI16436.158ENSOMEG00000012368-7036.709
ENSOMEG00000017536MSI15540.884ENSOMEG00000004838hnrnpa35640.642
ENSOMEG00000017536MSI15245.833ENSOMEG00000023772hnrnpabb8640.000
ENSOMEG00000017536MSI15234.615ENSOMEG00000011670-9735.443
ENSOMEG00000017536MSI15546.429ENSOMEG00000018558hnrnpd5447.674
ENSOMEG00000017536MSI16636.723ENSOMEG00000002509-9136.607
ENSOMEG00000017536MSI16337.931ENSOMEG00000002084-7037.931
ENSOMEG00000017536MSI15243.750ENSOMEG00000002000-6536.283
ENSOMEG00000017536MSI16635.593ENSOMEG00000023475-7036.111
ENSOMEG00000017536MSI16437.815ENSOMEG00000006903-7335.912
ENSOMEG00000017536MSI15234.940ENSOMEG00000000997tardbp5534.940
ENSOMEG00000017536MSI110070.846ENSOMEG00000000146msi2a9870.846
ENSOMEG00000017536MSI16134.711ENSOMEG00000013637-5234.711
ENSOMEG00000017536MSI17531.776ENSOMEG00000020931tia16431.776
ENSOMEG00000017536MSI15444.920ENSOMEG00000005936hnrnpaba7638.039
ENSOMEG00000017536MSI15539.785ENSOMEG00000006327-7039.785
ENSOMEG00000017536MSI15036.709ENSOMEG00000006805rbm385531.250
ENSOMEG00000017536MSI15736.364ENSOMEG00000009566-8536.943
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000017536MSI110084.807ENSG00000135097MSI110084.807Homo_sapiens
ENSOMEG00000017536MSI110092.308ENSAPOG00000003191MSI110092.308Acanthochromis_polyacanthus
ENSOMEG00000017536MSI110098.567ENSAPOG00000023458-10098.567Acanthochromis_polyacanthus
ENSOMEG00000017536MSI110066.048ENSAMEG00000013302MSI110065.782Ailuropoda_melanoleuca
ENSOMEG00000017536MSI19689.298ENSACIG00000017754-7293.103Amphilophus_citrinellus
ENSOMEG00000017536MSI110088.889ENSAOCG00000009031-9589.198Amphiprion_ocellaris
ENSOMEG00000017536MSI110092.308ENSAOCG00000003804MSI110092.308Amphiprion_ocellaris
ENSOMEG00000017536MSI110092.308ENSAPEG00000003245MSI110092.308Amphiprion_percula
ENSOMEG00000017536MSI110098.567ENSAPEG00000006857-8498.567Amphiprion_percula
ENSOMEG00000017536MSI110086.103ENSATEG00000023779-10084.225Anabas_testudineus
ENSOMEG00000017536MSI110094.930ENSATEG00000017059MSI110094.930Anabas_testudineus
ENSOMEG00000017536MSI110085.596ENSACAG00000002762MSI19687.536Anolis_carolinensis
ENSOMEG00000017536MSI19575.159ENSANAG00000027901-8885.315Aotus_nancymaae
ENSOMEG00000017536MSI110084.807ENSANAG00000027151MSI110084.807Aotus_nancymaae
ENSOMEG00000017536MSI110099.140ENSACLG00000000117-10099.390Astatotilapia_calliptera
ENSOMEG00000017536MSI110092.877ENSACLG00000011230MSI110092.877Astatotilapia_calliptera
ENSOMEG00000017536MSI110088.889ENSAMXG00000038960msi17693.730Astyanax_mexicanus
ENSOMEG00000017536MSI110084.807ENSBTAG00000009800MSI110085.924Bos_taurus
ENSOMEG00000017536MSI110084.807ENSCJAG00000008578MSI110084.807Callithrix_jacchus
ENSOMEG00000017536MSI110084.530ENSCAFG00000010283MSI110084.530Canis_familiaris
ENSOMEG00000017536MSI110082.958ENSCAFG00020020585MSI110086.174Canis_lupus_dingo
ENSOMEG00000017536MSI110082.561ENSCHIG00000024304MSI110082.561Capra_hircus
ENSOMEG00000017536MSI110082.263ENSTSYG00000033949MSI19585.321Carlito_syrichta
ENSOMEG00000017536MSI110073.802ENSCAPG00000003919MSI18976.997Cavia_aperea
ENSOMEG00000017536MSI110082.991ENSCPOG00000012361MSI110085.965Cavia_porcellus
ENSOMEG00000017536MSI110084.807ENSCCAG00000035567MSI110084.807Cebus_capucinus
ENSOMEG00000017536MSI110084.807ENSCATG00000030019MSI110084.807Cercocebus_atys
ENSOMEG00000017536MSI110082.991ENSCLAG00000011329MSI110085.965Chinchilla_lanigera
ENSOMEG00000017536MSI17884.838ENSCSAG00000002265MSI19684.838Chlorocebus_sabaeus
ENSOMEG00000017536MSI110088.319ENSCPBG00000011349MSI110088.319Chrysemys_picta_bellii
ENSOMEG00000017536MSI110082.317ENSCANG00000040651MSI110085.366Colobus_angolensis_palliatus
ENSOMEG00000017536MSI110084.807ENSCGRG00001018883Msi110084.807Cricetulus_griseus_chok1gshd
ENSOMEG00000017536MSI110082.371ENSCGRG00000002191Msi17285.410Cricetulus_griseus_crigri
ENSOMEG00000017536MSI110090.123ENSCSEG00000011032MSI110090.123Cynoglossus_semilaevis
ENSOMEG00000017536MSI110091.453ENSCSEG00000005834-10091.453Cynoglossus_semilaevis
ENSOMEG00000017536MSI110097.421ENSCSEG00000008352-10097.421Cynoglossus_semilaevis
ENSOMEG00000017536MSI16274.312ENSCVAG00000017463-8974.312Cyprinodon_variegatus
ENSOMEG00000017536MSI15166.418ENSCVAG00000017430zgc:1107969466.418Cyprinodon_variegatus
ENSOMEG00000017536MSI110098.854ENSCVAG00000009100MSI110098.854Cyprinodon_variegatus
ENSOMEG00000017536MSI17992.130ENSDARG00000102015CABZ01037298.19892.130Danio_rerio
ENSOMEG00000017536MSI110090.354ENSDARG00000010710msi110095.327Danio_rerio
ENSOMEG00000017536MSI110079.747ENSDNOG00000005713MSI19182.911Dasypus_novemcinctus
ENSOMEG00000017536MSI110081.737ENSDORG00000005610Msi19484.731Dipodomys_ordii
ENSOMEG00000017536MSI110079.268ENSETEG00000004756MSI110082.012Echinops_telfairi
ENSOMEG00000017536MSI110084.807ENSEASG00005004736MSI110084.807Equus_asinus_asinus
ENSOMEG00000017536MSI110084.807ENSECAG00000017526MSI110084.807Equus_caballus
ENSOMEG00000017536MSI110085.920ENSELUG00000023219MSI19290.544Esox_lucius
ENSOMEG00000017536MSI110087.654ENSELUG00000023280-10087.346Esox_lucius
ENSOMEG00000017536MSI110084.807ENSFCAG00000011007MSI110084.807Felis_catus
ENSOMEG00000017536MSI110086.667ENSFALG00000007574MSI110090.000Ficedula_albicollis
ENSOMEG00000017536MSI110082.012ENSFDAG00000019586MSI110085.061Fukomys_damarensis
ENSOMEG00000017536MSI110092.308ENSFHEG00000003560-10092.308Fundulus_heteroclitus
ENSOMEG00000017536MSI110098.854ENSFHEG00000022446MSI110098.854Fundulus_heteroclitus
ENSOMEG00000017536MSI110095.989ENSGMOG00000001006MSI19995.989Gadus_morhua
ENSOMEG00000017536MSI110083.099ENSGMOG00000017838-10082.817Gadus_morhua
ENSOMEG00000017536MSI110085.496ENSGALG00000007227MSI19876.726Gallus_gallus
ENSOMEG00000017536MSI110087.500ENSGAFG00000021522MSI19492.097Gambusia_affinis
ENSOMEG00000017536MSI110075.568ENSGAFG00000005860-10075.568Gambusia_affinis
ENSOMEG00000017536MSI110084.765ENSGACG00000008674-10084.765Gasterosteus_aculeatus
ENSOMEG00000017536MSI110097.421ENSGACG00000012679MSI110097.421Gasterosteus_aculeatus
ENSOMEG00000017536MSI110088.034ENSGAGG00000016037MSI110088.034Gopherus_agassizii
ENSOMEG00000017536MSI110082.803ENSGGOG00000010328MSI110085.987Gorilla_gorilla
ENSOMEG00000017536MSI110099.140ENSHBUG00000011841-10099.140Haplochromis_burtoni
ENSOMEG00000017536MSI110092.877ENSHBUG00000021921MSI110092.877Haplochromis_burtoni
ENSOMEG00000017536MSI110084.530ENSHGLG00000012782MSI110084.530Heterocephalus_glaber_female
ENSOMEG00000017536MSI110082.012ENSHGLG00100016848MSI110085.061Heterocephalus_glaber_male
ENSOMEG00000017536MSI110086.728ENSHCOG00000012019MSI110086.728Hippocampus_comes
ENSOMEG00000017536MSI110092.628ENSHCOG00000012067-10091.785Hippocampus_comes
ENSOMEG00000017536MSI110091.977ENSIPUG00000001976msi19794.311Ictalurus_punctatus
ENSOMEG00000017536MSI110082.958ENSSTOG00000009799MSI110086.174Ictidomys_tridecemlineatus
ENSOMEG00000017536MSI110073.204ENSJJAG00000010643-10073.938Jaculus_jaculus
ENSOMEG00000017536MSI110084.807ENSJJAG00000010463Msi110084.807Jaculus_jaculus
ENSOMEG00000017536MSI110097.421ENSKMAG00000011251MSI110097.421Kryptolebias_marmoratus
ENSOMEG00000017536MSI110087.963ENSKMAG00000019877-10087.963Kryptolebias_marmoratus
ENSOMEG00000017536MSI110098.854ENSLBEG00000008789MSI110098.854Labrus_bergylta
ENSOMEG00000017536MSI110092.308ENSLBEG00000001375-10092.308Labrus_bergylta
ENSOMEG00000017536MSI110084.412ENSLACG00000018287MSI110084.795Latimeria_chalumnae
ENSOMEG00000017536MSI15280.000ENSLOCG00000008618zgc:1107967180.000Lepisosteus_oculatus
ENSOMEG00000017536MSI19673.750ENSLAFG00000009412MSI110076.133Loxodonta_africana
ENSOMEG00000017536MSI110082.991ENSMFAG00000001798MSI110085.965Macaca_fascicularis
ENSOMEG00000017536MSI110082.991ENSMMUG00000031527MSI19785.303Macaca_mulatta
ENSOMEG00000017536MSI110084.807ENSMNEG00000040034MSI110084.807Macaca_nemestrina
ENSOMEG00000017536MSI110082.317ENSMLEG00000003921MSI110085.366Mandrillus_leucophaeus
ENSOMEG00000017536MSI110098.281ENSMAMG00000002279MSI110098.281Mastacembelus_armatus
ENSOMEG00000017536MSI110091.453ENSMAMG00000018426-10091.738Mastacembelus_armatus
ENSOMEG00000017536MSI110092.877ENSMZEG00005026892MSI110092.877Maylandia_zebra
ENSOMEG00000017536MSI110099.140ENSMZEG00005000340-10099.140Maylandia_zebra
ENSOMEG00000017536MSI16894.675ENSMGAG00000016518-10094.675Meleagris_gallopavo
ENSOMEG00000017536MSI17289.224ENSMAUG00000016820Msi110089.712Mesocricetus_auratus
ENSOMEG00000017536MSI110084.807ENSMICG00000033181MSI110084.807Microcebus_murinus
ENSOMEG00000017536MSI110084.530ENSMOCG00000002286Msi110084.530Microtus_ochrogaster
ENSOMEG00000017536MSI110087.898ENSMMOG00000012265-9986.562Mola_mola
ENSOMEG00000017536MSI110087.346ENSMMOG00000010492MSI19687.346Mola_mola
ENSOMEG00000017536MSI19657.612ENSMODG00000003189-10058.434Monodelphis_domestica
ENSOMEG00000017536MSI110087.963ENSMALG00000001426-10092.378Monopterus_albus
ENSOMEG00000017536MSI110098.854ENSMALG00000017889MSI110098.854Monopterus_albus
ENSOMEG00000017536MSI110084.254MGP_CAROLIEiJ_G0027626Msi110084.254Mus_caroli
ENSOMEG00000017536MSI110085.185ENSMUSG00000054256Msi19987.963Mus_musculus
ENSOMEG00000017536MSI110086.610MGP_PahariEiJ_G0024206Msi110086.610Mus_pahari
ENSOMEG00000017536MSI110084.254MGP_SPRETEiJ_G0028624Msi110084.254Mus_spretus
ENSOMEG00000017536MSI110082.958ENSMPUG00000003168MSI110086.174Mustela_putorius_furo
ENSOMEG00000017536MSI19476.786ENSMLUG00000010313MSI110076.786Myotis_lucifugus
ENSOMEG00000017536MSI110082.371ENSNGAG00000014508Msi19185.410Nannospalax_galili
ENSOMEG00000017536MSI18985.246ENSNBRG00000018012MSI19985.246Neolamprologus_brichardi
ENSOMEG00000017536MSI110099.140ENSNBRG00000000841-10099.140Neolamprologus_brichardi
ENSOMEG00000017536MSI19672.866ENSNLEG00000015636MSI110075.915Nomascus_leucogenys
ENSOMEG00000017536MSI110062.195ENSMEUG00000015759MSI110065.244Notamacropus_eugenii
ENSOMEG00000017536MSI19675.238ENSOPRG00000016879MSI110078.413Ochotona_princeps
ENSOMEG00000017536MSI110082.317ENSODEG00000006328MSI110085.366Octodon_degus
ENSOMEG00000017536MSI110089.560ENSONIG00000019452-10089.560Oreochromis_niloticus
ENSOMEG00000017536MSI110099.140ENSONIG00000011182MSI110099.140Oreochromis_niloticus
ENSOMEG00000017536MSI110082.958ENSOCUG00000027716MSI110086.174Oryctolagus_cuniculus
ENSOMEG00000017536MSI110099.713ENSORLG00000019978-10099.713Oryzias_latipes
ENSOMEG00000017536MSI110091.168ENSORLG00000029593MSI110091.168Oryzias_latipes
ENSOMEG00000017536MSI110099.713ENSORLG00020001208-7199.713Oryzias_latipes_hni
ENSOMEG00000017536MSI110091.168ENSORLG00020008266MSI19987.963Oryzias_latipes_hni
ENSOMEG00000017536MSI110091.168ENSORLG00015003916MSI110091.168Oryzias_latipes_hsok
ENSOMEG00000017536MSI110099.713ENSORLG00015013672-7199.713Oryzias_latipes_hsok
ENSOMEG00000017536MSI110082.267ENSOGAG00000003847MSI19684.571Otolemur_garnettii
ENSOMEG00000017536MSI110079.394ENSOARG00000012097MSI110082.424Ovis_aries
ENSOMEG00000017536MSI110082.317ENSPPAG00000043073MSI110085.366Pan_paniscus
ENSOMEG00000017536MSI110084.807ENSPPRG00000000370MSI110084.807Panthera_pardus
ENSOMEG00000017536MSI110082.958ENSPTIG00000008913MSI110086.174Panthera_tigris_altaica
ENSOMEG00000017536MSI110084.807ENSPTRG00000005531MSI110084.807Pan_troglodytes
ENSOMEG00000017536MSI110084.530ENSPANG00000006335MSI110084.530Papio_anubis
ENSOMEG00000017536MSI110093.410ENSPKIG00000016497MSI110093.410Paramormyrops_kingsleyae
ENSOMEG00000017536MSI110093.410ENSPKIG00000023575-10093.410Paramormyrops_kingsleyae
ENSOMEG00000017536MSI110082.927ENSPSIG00000011608-9386.018Pelodiscus_sinensis
ENSOMEG00000017536MSI18476.419ENSPSIG00000009621-10080.786Pelodiscus_sinensis
ENSOMEG00000017536MSI15285.470ENSPSIG00000016295-9585.470Pelodiscus_sinensis
ENSOMEG00000017536MSI19694.534ENSPMGG00000000514MSI19794.534Periophthalmus_magnuspinnatus
ENSOMEG00000017536MSI110073.860ENSPMGG00000007743-9272.531Periophthalmus_magnuspinnatus
ENSOMEG00000017536MSI110081.009ENSPEMG00000010491Msi19583.976Peromyscus_maniculatus_bairdii
ENSOMEG00000017536MSI110099.427ENSPFOG00000013113MSI110099.427Poecilia_formosa
ENSOMEG00000017536MSI110091.738ENSPFOG00000008319-8691.738Poecilia_formosa
ENSOMEG00000017536MSI110091.738ENSPLAG00000012431-9791.738Poecilia_latipinna
ENSOMEG00000017536MSI110099.427ENSPLAG00000014025-10099.427Poecilia_latipinna
ENSOMEG00000017536MSI110099.427ENSPMEG00000012796MSI110099.427Poecilia_mexicana
ENSOMEG00000017536MSI110091.168ENSPMEG00000007025-8691.168Poecilia_mexicana
ENSOMEG00000017536MSI19688.782ENSPREG00000021416-9486.420Poecilia_reticulata
ENSOMEG00000017536MSI18188.479ENSPREG00000014574-10088.479Poecilia_reticulata
ENSOMEG00000017536MSI110083.978ENSPPYG00000005027MSI110083.978Pongo_abelii
ENSOMEG00000017536MSI17690.355ENSPCAG00000002300MSI17290.355Procavia_capensis
ENSOMEG00000017536MSI110084.807ENSPCOG00000017341MSI110084.807Propithecus_coquereli
ENSOMEG00000017536MSI110067.073ENSPVAG00000002225MSI110069.817Pteropus_vampyrus
ENSOMEG00000017536MSI110092.877ENSPNYG00000004379MSI110092.877Pundamilia_nyererei
ENSOMEG00000017536MSI110099.140ENSPNYG00000002529-10099.140Pundamilia_nyererei
ENSOMEG00000017536MSI110093.410ENSPNAG00000019337msi110093.410Pygocentrus_nattereri
ENSOMEG00000017536MSI110082.637ENSRNOG00000001156Msi110085.852Rattus_norvegicus
ENSOMEG00000017536MSI110082.958ENSRBIG00000036889MSI110086.174Rhinopithecus_bieti
ENSOMEG00000017536MSI110082.121ENSRROG00000041076MSI19385.152Rhinopithecus_roxellana
ENSOMEG00000017536MSI110082.991ENSSBOG00000030259MSI19985.965Saimiri_boliviensis_boliviensis
ENSOMEG00000017536MSI110072.876ENSSHAG00000006834MSI110076.144Sarcophilus_harrisii
ENSOMEG00000017536MSI110089.634ENSSFOG00015014964-9594.225Scleropages_formosus
ENSOMEG00000017536MSI110090.123ENSSFOG00015005350MSI19694.260Scleropages_formosus
ENSOMEG00000017536MSI19492.748ENSSMAG00000009156-7391.133Scophthalmus_maximus
ENSOMEG00000017536MSI110093.910ENSSMAG00000018824MSI19793.910Scophthalmus_maximus
ENSOMEG00000017536MSI110092.593ENSSDUG00000022697-10092.593Seriola_dumerili
ENSOMEG00000017536MSI110099.140ENSSDUG00000001027MSI110099.140Seriola_dumerili
ENSOMEG00000017536MSI110084.404ENSSLDG00000018706-9784.404Seriola_lalandi_dorsalis
ENSOMEG00000017536MSI110099.140ENSSLDG00000016832MSI110099.140Seriola_lalandi_dorsalis
ENSOMEG00000017536MSI110088.034ENSSPUG00000015741MSI110088.034Sphenodon_punctatus
ENSOMEG00000017536MSI15484.375ENSSPAG00000015573zgc:1107968284.375Stegastes_partitus
ENSOMEG00000017536MSI18182.126ENSSPAG00000014085-10082.126Stegastes_partitus
ENSOMEG00000017536MSI110089.506ENSSPAG00000013098-10093.598Stegastes_partitus
ENSOMEG00000017536MSI110084.530ENSSSCG00000029365MSI110085.852Sus_scrofa
ENSOMEG00000017536MSI110084.071ENSTGUG00000009534MSI110087.059Taeniopygia_guttata
ENSOMEG00000017536MSI15090.722ENSTRUG00000021586-9990.722Takifugu_rubripes
ENSOMEG00000017536MSI18987.402ENSTRUG00000016249MSI110087.402Takifugu_rubripes
ENSOMEG00000017536MSI110082.051ENSTRUG00000015636-7982.051Takifugu_rubripes
ENSOMEG00000017536MSI110064.024ENSTNIG00000019814-9663.609Tetraodon_nigroviridis
ENSOMEG00000017536MSI110093.750ENSTNIG00000011469MSI110093.750Tetraodon_nigroviridis
ENSOMEG00000017536MSI110072.161ENSTBEG00000007182MSI110075.458Tupaia_belangeri
ENSOMEG00000017536MSI18186.038ENSTTRG00000005663MSI17889.850Tursiops_truncatus
ENSOMEG00000017536MSI16993.264ENSUAMG00000015514MSI19488.426Ursus_americanus
ENSOMEG00000017536MSI110082.838ENSUMAG00000006176MSI18882.838Ursus_maritimus
ENSOMEG00000017536MSI110083.692ENSVVUG00000020993MSI110084.685Vulpes_vulpes
ENSOMEG00000017536MSI110085.673ENSXETG00000012216msi110086.246Xenopus_tropicalis
ENSOMEG00000017536MSI110075.926ENSXCOG00000017605MSI18975.926Xiphophorus_couchianus
ENSOMEG00000017536MSI110098.854ENSXMAG00000027103MSI110085.955Xiphophorus_maculatus
ENSOMEG00000017536MSI110091.453ENSXMAG00000018237-10091.453Xiphophorus_maculatus

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