EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000017737 (Gene tree)
Gene ID: 112151550
Gene Symbol: rnpc3
Alias: -
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 16264 bases
Position: chrNVQA01000015.1:7634066-7650329
Accession: 112151550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000032347	RRM_1	PF00076.22	2.1e-15	1	2
ENSOMEP00000032347	RRM_1	PF00076.22	2.1e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000024461	-	2122	-	ENSOMEP00000032347	499 (aa)	XP_024136297	UPI000CF7D696

Gene Model

Click here to download ENSOMEG00000017737's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000017737's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000017737	rnpc3	97	56.162	ENSG00000185946	RNPC3	96	55.639	Homo_sapiens
ENSOMEG00000017737	rnpc3	100	79.125	ENSAPOG00000017371	rnpc3	100	79.125	Acanthochromis_polyacanthus
ENSOMEG00000017737	rnpc3	97	55.533	ENSAMEG00000001694	RNPC3	95	54.637	Ailuropoda_melanoleuca
ENSOMEG00000017737	rnpc3	99	73.870	ENSACIG00000021043	rnpc3	99	73.477	Amphilophus_citrinellus
ENSOMEG00000017737	rnpc3	100	78.235	ENSAOCG00000014052	rnpc3	98	78.235	Amphiprion_ocellaris
ENSOMEG00000017737	rnpc3	100	78.235	ENSAPEG00000008739	rnpc3	98	78.235	Amphiprion_percula
ENSOMEG00000017737	rnpc3	100	75.775	ENSATEG00000021263	rnpc3	100	75.775	Anabas_testudineus
ENSOMEG00000017737	rnpc3	89	55.011	ENSAPLG00000015605	RNPC3	99	54.343	Anas_platyrhynchos
ENSOMEG00000017737	rnpc3	95	54.886	ENSACAG00000002029	RNPC3	96	54.472	Anolis_carolinensis
ENSOMEG00000017737	rnpc3	97	55.020	ENSANAG00000019950	RNPC3	95	53.924	Aotus_nancymaae
ENSOMEG00000017737	rnpc3	99	77.867	ENSACLG00000014702	rnpc3	99	77.867	Astatotilapia_calliptera
ENSOMEG00000017737	rnpc3	99	64.484	ENSAMXG00000033372	rnpc3	52	68.284	Astyanax_mexicanus
ENSOMEG00000017737	rnpc3	97	55.444	ENSBTAG00000019091	RNPC3	95	54.343	Bos_taurus
ENSOMEG00000017737	rnpc3	97	54.158	ENSCJAG00000035686	RNPC3	95	54.361	Callithrix_jacchus
ENSOMEG00000017737	rnpc3	97	55.847	ENSCAFG00000019972	RNPC3	95	54.343	Canis_familiaris
ENSOMEG00000017737	rnpc3	97	55.645	ENSCAFG00020011300	RNPC3	95	54.343	Canis_lupus_dingo
ENSOMEG00000017737	rnpc3	97	55.332	ENSCHIG00000020361	RNPC3	95	54.234	Capra_hircus
ENSOMEG00000017737	rnpc3	97	54.747	ENSTSYG00000030256	RNPC3	95	54.747	Carlito_syrichta
ENSOMEG00000017737	rnpc3	86	47.836	ENSCAPG00000013600	RNPC3	97	46.882	Cavia_aperea
ENSOMEG00000017737	rnpc3	97	55.131	ENSCPOG00000031638	RNPC3	95	54.032	Cavia_porcellus
ENSOMEG00000017737	rnpc3	97	55.242	ENSCCAG00000024301	RNPC3	95	54.343	Cebus_capucinus
ENSOMEG00000017737	rnpc3	97	56.048	ENSCATG00000002086	RNPC3	95	54.747	Cercocebus_atys
ENSOMEG00000017737	rnpc3	97	43.648	ENSCATG00000035930	-	52	49.580	Cercocebus_atys
ENSOMEG00000017737	rnpc3	97	54.435	ENSCLAG00000005169	RNPC3	95	52.121	Chinchilla_lanigera
ENSOMEG00000017737	rnpc3	97	56.048	ENSCSAG00000001519	RNPC3	95	54.747	Chlorocebus_sabaeus
ENSOMEG00000017737	rnpc3	98	56.364	ENSCPBG00000028311	RNPC3	96	56.162	Chrysemys_picta_bellii
ENSOMEG00000017737	rnpc3	61	56.349	ENSCSAVG00000002800	-	75	56.349	Ciona_savignyi
ENSOMEG00000017737	rnpc3	97	55.645	ENSCANG00000031444	RNPC3	95	54.343	Colobus_angolensis_palliatus
ENSOMEG00000017737	rnpc3	96	54.564	ENSCGRG00001019276	Rnpc3	95	53.659	Cricetulus_griseus_chok1gshd
ENSOMEG00000017737	rnpc3	89	53.407	ENSCGRG00000000053	Rnpc3	99	52.203	Cricetulus_griseus_crigri
ENSOMEG00000017737	rnpc3	98	75.407	ENSCSEG00000013475	rnpc3	97	75.407	Cynoglossus_semilaevis
ENSOMEG00000017737	rnpc3	100	79.377	ENSCVAG00000002645	rnpc3	100	79.377	Cyprinodon_variegatus
ENSOMEG00000017737	rnpc3	99	64.032	ENSDARG00000011247	rnpc3	99	64.764	Danio_rerio
ENSOMEG00000017737	rnpc3	97	54.326	ENSDNOG00000047498	-	95	54.125	Dasypus_novemcinctus
ENSOMEG00000017737	rnpc3	97	53.924	ENSDNOG00000044555	-	95	53.722	Dasypus_novemcinctus
ENSOMEG00000017737	rnpc3	97	54.545	ENSDORG00000027343	Rnpc3	95	53.441	Dipodomys_ordii
ENSOMEG00000017737	rnpc3	100	50.190	ENSEBUG00000002068	rnpc3	99	50.095	Eptatretus_burgeri
ENSOMEG00000017737	rnpc3	97	55.734	ENSEASG00005015957	RNPC3	95	54.637	Equus_asinus_asinus
ENSOMEG00000017737	rnpc3	97	55.734	ENSECAG00000021148	RNPC3	95	54.637	Equus_caballus
ENSOMEG00000017737	rnpc3	99	66.089	ENSELUG00000002264	rnpc3	98	65.896	Esox_lucius
ENSOMEG00000017737	rnpc3	97	55.444	ENSFCAG00000024312	RNPC3	95	54.343	Felis_catus
ENSOMEG00000017737	rnpc3	89	54.788	ENSFALG00000002580	RNPC3	99	56.731	Ficedula_albicollis
ENSOMEG00000017737	rnpc3	97	55.020	ENSFDAG00000019948	RNPC3	95	53.924	Fukomys_damarensis
ENSOMEG00000017737	rnpc3	100	75.000	ENSFHEG00000020647	rnpc3	51	72.973	Fundulus_heteroclitus
ENSOMEG00000017737	rnpc3	99	68.663	ENSGMOG00000019213	rnpc3	98	68.737	Gadus_morhua
ENSOMEG00000017737	rnpc3	100	77.451	ENSGAFG00000017236	rnpc3	100	77.451	Gambusia_affinis
ENSOMEG00000017737	rnpc3	100	74.455	ENSGACG00000002048	rnpc3	99	74.563	Gasterosteus_aculeatus
ENSOMEG00000017737	rnpc3	97	55.714	ENSGAGG00000008438	RNPC3	94	56.735	Gopherus_agassizii
ENSOMEG00000017737	rnpc3	97	48.247	ENSGGOG00000026201	-	94	48.247	Gorilla_gorilla
ENSOMEG00000017737	rnpc3	97	54.600	ENSHGLG00000001708	RNPC3	95	53.507	Heterocephalus_glaber_female
ENSOMEG00000017737	rnpc3	97	54.600	ENSHGLG00100003005	RNPC3	95	53.507	Heterocephalus_glaber_male
ENSOMEG00000017737	rnpc3	99	73.016	ENSHCOG00000017135	rnpc3	100	73.016	Hippocampus_comes
ENSOMEG00000017737	rnpc3	97	55.622	ENSSTOG00000025020	RNPC3	95	54.527	Ictidomys_tridecemlineatus
ENSOMEG00000017737	rnpc3	96	54.490	ENSJJAG00000010203	Rnpc3	96	53.144	Jaculus_jaculus
ENSOMEG00000017737	rnpc3	99	78.200	ENSKMAG00000017358	rnpc3	99	75.000	Kryptolebias_marmoratus
ENSOMEG00000017737	rnpc3	100	76.471	ENSLBEG00000024901	rnpc3	98	76.471	Labrus_bergylta
ENSOMEG00000017737	rnpc3	97	58.656	ENSLACG00000005720	RNPC3	90	58.656	Latimeria_chalumnae
ENSOMEG00000017737	rnpc3	98	62.777	ENSLOCG00000007986	rnpc3	98	59.557	Lepisosteus_oculatus
ENSOMEG00000017737	rnpc3	97	55.444	ENSLAFG00000032342	RNPC3	95	54.032	Loxodonta_africana
ENSOMEG00000017737	rnpc3	97	56.048	ENSMFAG00000002004	RNPC3	95	54.747	Macaca_fascicularis
ENSOMEG00000017737	rnpc3	97	43.265	ENSMFAG00000002917	-	54	50.420	Macaca_fascicularis
ENSOMEG00000017737	rnpc3	80	53.140	ENSMMUG00000002098	-	85	53.140	Macaca_mulatta
ENSOMEG00000017737	rnpc3	97	55.847	ENSMMUG00000018039	RNPC3	95	54.545	Macaca_mulatta
ENSOMEG00000017737	rnpc3	97	52.823	ENSMNEG00000033950	RNPC3	95	51.515	Macaca_nemestrina
ENSOMEG00000017737	rnpc3	97	43.121	ENSMLEG00000034644	-	95	42.656	Mandrillus_leucophaeus
ENSOMEG00000017737	rnpc3	97	56.048	ENSMLEG00000033628	RNPC3	95	54.747	Mandrillus_leucophaeus
ENSOMEG00000017737	rnpc3	100	69.472	ENSMAMG00000007496	rnpc3	100	64.695	Mastacembelus_armatus
ENSOMEG00000017737	rnpc3	99	76.803	ENSMZEG00005020233	rnpc3	99	76.803	Maylandia_zebra
ENSOMEG00000017737	rnpc3	89	55.066	ENSMGAG00000006381	RNPC3	57	54.198	Meleagris_gallopavo
ENSOMEG00000017737	rnpc3	97	55.172	ENSMAUG00000001358	Rnpc3	95	53.659	Mesocricetus_auratus
ENSOMEG00000017737	rnpc3	97	54.234	ENSMICG00000029591	RNPC3	95	54.435	Microcebus_murinus
ENSOMEG00000017737	rnpc3	97	55.758	ENSMOCG00000013423	Rnpc3	95	53.939	Microtus_ochrogaster
ENSOMEG00000017737	rnpc3	97	53.988	ENSMODG00000002946	RNPC3	95	53.988	Monodelphis_domestica
ENSOMEG00000017737	rnpc3	99	72.102	ENSMALG00000015471	rnpc3	100	72.102	Monopterus_albus
ENSOMEG00000017737	rnpc3	97	55.466	MGP_CAROLIEiJ_G0025555	Rnpc3	97	53.955	Mus_caroli
ENSOMEG00000017737	rnpc3	97	55.444	ENSMUSG00000027981	Rnpc3	99	52.790	Mus_musculus
ENSOMEG00000017737	rnpc3	97	54.930	MGP_PahariEiJ_G0027001	Rnpc3	97	53.427	Mus_pahari
ENSOMEG00000017737	rnpc3	97	55.242	MGP_SPRETEiJ_G0026505	Rnpc3	97	53.737	Mus_spretus
ENSOMEG00000017737	rnpc3	97	55.960	ENSMPUG00000007349	RNPC3	95	54.065	Mustela_putorius_furo
ENSOMEG00000017737	rnpc3	97	56.073	ENSMLUG00000028743	RNPC3	95	54.564	Myotis_lucifugus
ENSOMEG00000017737	rnpc3	97	54.618	ENSNGAG00000010939	Rnpc3	96	53.119	Nannospalax_galili
ENSOMEG00000017737	rnpc3	99	78.068	ENSNBRG00000012196	rnpc3	96	78.068	Neolamprologus_brichardi
ENSOMEG00000017737	rnpc3	97	55.533	ENSNLEG00000012013	RNPC3	95	54.234	Nomascus_leucogenys
ENSOMEG00000017737	rnpc3	97	56.566	ENSODEG00000007612	RNPC3	95	54.251	Octodon_degus
ENSOMEG00000017737	rnpc3	99	78.501	ENSONIG00000004770	rnpc3	100	79.918	Oreochromis_niloticus
ENSOMEG00000017737	rnpc3	91	56.009	ENSOANG00000008220	RNPC3	56	54.789	Ornithorhynchus_anatinus
ENSOMEG00000017737	rnpc3	97	54.618	ENSOCUG00000004016	RNPC3	95	53.722	Oryctolagus_cuniculus
ENSOMEG00000017737	rnpc3	100	92.800	ENSORLG00000005694	rnpc3	100	92.800	Oryzias_latipes
ENSOMEG00000017737	rnpc3	100	92.800	ENSORLG00020005513	rnpc3	100	92.800	Oryzias_latipes_hni
ENSOMEG00000017737	rnpc3	100	92.600	ENSORLG00015002179	rnpc3	100	92.600	Oryzias_latipes_hsok
ENSOMEG00000017737	rnpc3	97	55.354	ENSOGAG00000026182	RNPC3	95	55.354	Otolemur_garnettii
ENSOMEG00000017737	rnpc3	97	55.332	ENSOARG00000018719	RNPC3	95	54.234	Ovis_aries
ENSOMEG00000017737	rnpc3	98	48.171	ENSPPAG00000030278	-	97	48.780	Pan_paniscus
ENSOMEG00000017737	rnpc3	97	55.936	ENSPPAG00000037459	RNPC3	95	54.251	Pan_paniscus
ENSOMEG00000017737	rnpc3	97	55.444	ENSPPRG00000020246	RNPC3	95	54.343	Panthera_pardus
ENSOMEG00000017737	rnpc3	97	55.444	ENSPTIG00000009887	RNPC3	97	54.343	Panthera_tigris_altaica
ENSOMEG00000017737	rnpc3	98	48.057	ENSPTRG00000044227	-	97	48.057	Pan_troglodytes
ENSOMEG00000017737	rnpc3	97	55.847	ENSPTRG00000033902	RNPC3	95	54.545	Pan_troglodytes
ENSOMEG00000017737	rnpc3	97	44.898	ENSPANG00000029957	-	51	49.580	Papio_anubis
ENSOMEG00000017737	rnpc3	97	55.960	ENSPANG00000012137	RNPC3	95	54.858	Papio_anubis
ENSOMEG00000017737	rnpc3	99	64.497	ENSPKIG00000008828	rnpc3	98	64.625	Paramormyrops_kingsleyae
ENSOMEG00000017737	rnpc3	64	55.215	ENSPSIG00000007396	RNPC3	99	55.215	Pelodiscus_sinensis
ENSOMEG00000017737	rnpc3	97	65.392	ENSPMGG00000011742	rnpc3	98	63.783	Periophthalmus_magnuspinnatus
ENSOMEG00000017737	rnpc3	89	54.725	ENSPEMG00000020112	Rnpc3	99	53.084	Peromyscus_maniculatus_bairdii
ENSOMEG00000017737	rnpc3	98	54.251	ENSPCIG00000004415	-	96	54.251	Phascolarctos_cinereus
ENSOMEG00000017737	rnpc3	99	78.812	ENSPFOG00000009895	rnpc3	99	78.812	Poecilia_formosa
ENSOMEG00000017737	rnpc3	100	78.978	ENSPLAG00000012023	rnpc3	100	78.978	Poecilia_latipinna
ENSOMEG00000017737	rnpc3	99	79.051	ENSPMEG00000003663	rnpc3	99	79.010	Poecilia_mexicana
ENSOMEG00000017737	rnpc3	100	78.543	ENSPREG00000010206	rnpc3	100	78.740	Poecilia_reticulata
ENSOMEG00000017737	rnpc3	81	51.566	ENSPPYG00000001102	RNPC3	94	50.000	Pongo_abelii
ENSOMEG00000017737	rnpc3	99	77.666	ENSPNYG00000020603	rnpc3	99	77.666	Pundamilia_nyererei
ENSOMEG00000017737	rnpc3	97	53.737	ENSRNOG00000017310	Rnpc3	95	53.939	Rattus_norvegicus
ENSOMEG00000017737	rnpc3	97	51.710	ENSRBIG00000043897	RNPC3	95	50.202	Rhinopithecus_bieti
ENSOMEG00000017737	rnpc3	97	56.048	ENSRROG00000032334	RNPC3	95	54.747	Rhinopithecus_roxellana
ENSOMEG00000017737	rnpc3	97	55.556	ENSSBOG00000024473	RNPC3	95	54.453	Saimiri_boliviensis_boliviensis
ENSOMEG00000017737	rnpc3	97	53.455	ENSSHAG00000011859	RNPC3	95	53.455	Sarcophilus_harrisii
ENSOMEG00000017737	rnpc3	99	66.469	ENSSFOG00015013055	rnpc3	99	67.413	Scleropages_formosus
ENSOMEG00000017737	rnpc3	100	72.427	ENSSMAG00000020346	rnpc3	100	72.233	Scophthalmus_maximus
ENSOMEG00000017737	rnpc3	100	76.998	ENSSDUG00000006600	rnpc3	100	76.803	Seriola_dumerili
ENSOMEG00000017737	rnpc3	100	77.193	ENSSLDG00000007979	rnpc3	100	76.998	Seriola_lalandi_dorsalis
ENSOMEG00000017737	rnpc3	100	78.088	ENSSPAG00000005633	rnpc3	100	75.098	Stegastes_partitus
ENSOMEG00000017737	rnpc3	97	55.936	ENSSSCG00000037254	RNPC3	95	53.427	Sus_scrofa
ENSOMEG00000017737	rnpc3	89	55.481	ENSTGUG00000004795	-	57	55.078	Taeniopygia_guttata
ENSOMEG00000017737	rnpc3	99	73.228	ENSTNIG00000018963	rnpc3	100	73.228	Tetraodon_nigroviridis
ENSOMEG00000017737	rnpc3	97	55.645	ENSUMAG00000007775	RNPC3	97	54.545	Ursus_maritimus
ENSOMEG00000017737	rnpc3	97	55.645	ENSVVUG00000000331	RNPC3	95	54.343	Vulpes_vulpes
ENSOMEG00000017737	rnpc3	96	45.726	ENSXETG00000025027	rnpc3	96	44.779	Xenopus_tropicalis
ENSOMEG00000017737	rnpc3	100	75.930	ENSXCOG00000005013	rnpc3	100	70.301	Xiphophorus_couchianus
ENSOMEG00000017737	rnpc3	100	77.843	ENSXMAG00000006495	rnpc3	100	77.843	Xiphophorus_maculatus