EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000017896 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: -
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 5339 bases
Position: chrNVQA01000027.1:20776358-20781696
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000032461	RRM_1	PF00076.22	4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000024739	PABPN1L-201	3483	-	ENSOMEP00000032461	363 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000017896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000017896's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000017896	PABPN1L	56	52.074	ENSOMEG00000016618	pabpn1	73	53.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000017896	PABPN1L	54	53.234	ENSG00000205022	PABPN1L	74	51.174	Homo_sapiens
ENSOMEG00000017896	PABPN1L	65	82.917	ENSAPOG00000000685	PABPN1L	78	83.333	Acanthochromis_polyacanthus
ENSOMEG00000017896	PABPN1L	65	81.356	ENSACIG00000021400	PABPN1L	98	81.780	Amphilophus_citrinellus
ENSOMEG00000017896	PABPN1L	72	80.608	ENSAOCG00000019844	PABPN1L	100	80.608	Amphiprion_ocellaris
ENSOMEG00000017896	PABPN1L	72	80.228	ENSAPEG00000019534	PABPN1L	100	80.228	Amphiprion_percula
ENSOMEG00000017896	PABPN1L	65	81.590	ENSATEG00000011646	PABPN1L	95	82.008	Anabas_testudineus
ENSOMEG00000017896	PABPN1L	52	53.968	ENSACAG00000013250	PABPN1L	92	53.968	Anolis_carolinensis
ENSOMEG00000017896	PABPN1L	54	51.000	ENSANAG00000038178	PABPN1L	71	51.000	Aotus_nancymaae
ENSOMEG00000017896	PABPN1L	72	79.087	ENSACLG00000025147	PABPN1L	100	80.608	Astatotilapia_calliptera
ENSOMEG00000017896	PABPN1L	51	52.551	ENSCJAG00000045284	PABPN1L	75	50.732	Callithrix_jacchus
ENSOMEG00000017896	PABPN1L	56	44.444	ENSCHIG00000013987	PABPN1L	76	44.444	Capra_hircus
ENSOMEG00000017896	PABPN1L	56	49.282	ENSCCAG00000027631	PABPN1L	74	49.282	Cebus_capucinus
ENSOMEG00000017896	PABPN1L	53	50.704	ENSCATG00000031060	PABPN1L	77	50.704	Cercocebus_atys
ENSOMEG00000017896	PABPN1L	51	48.848	ENSCSAG00000002881	PABPN1L	78	48.035	Chlorocebus_sabaeus
ENSOMEG00000017896	PABPN1L	53	49.048	ENSCANG00000039336	PABPN1L	76	49.048	Colobus_angolensis_palliatus
ENSOMEG00000017896	PABPN1L	72	75.758	ENSCSEG00000001142	pabpn1l	100	75.758	Cynoglossus_semilaevis
ENSOMEG00000017896	PABPN1L	72	81.749	ENSCVAG00000015547	PABPN1L	100	81.749	Cyprinodon_variegatus
ENSOMEG00000017896	PABPN1L	51	49.741	ENSEASG00005000777	PABPN1L	72	49.741	Equus_asinus_asinus
ENSOMEG00000017896	PABPN1L	51	50.251	ENSECAG00000000378	PABPN1L	72	50.251	Equus_caballus
ENSOMEG00000017896	PABPN1L	64	42.083	ENSEEUG00000004747	PABPN1L	89	42.083	Erinaceus_europaeus
ENSOMEG00000017896	PABPN1L	69	62.948	ENSELUG00000018385	PABPN1L	96	64.683	Esox_lucius
ENSOMEG00000017896	PABPN1L	72	82.510	ENSFHEG00000018295	PABPN1L	100	82.510	Fundulus_heteroclitus
ENSOMEG00000017896	PABPN1L	72	71.536	ENSGMOG00000001475	PABPN1L	100	73.408	Gadus_morhua
ENSOMEG00000017896	PABPN1L	72	81.749	ENSGAFG00000012565	PABPN1L	100	81.749	Gambusia_affinis
ENSOMEG00000017896	PABPN1L	72	75.836	ENSGACG00000015428	PABPN1L	100	75.836	Gasterosteus_aculeatus
ENSOMEG00000017896	PABPN1L	51	52.736	ENSGGOG00000012670	PABPN1L	76	50.952	Gorilla_gorilla
ENSOMEG00000017896	PABPN1L	72	79.848	ENSHBUG00000002388	PABPN1L	100	80.989	Haplochromis_burtoni
ENSOMEG00000017896	PABPN1L	72	79.104	ENSHCOG00000004151	PABPN1L	99	79.478	Hippocampus_comes
ENSOMEG00000017896	PABPN1L	55	47.317	ENSJJAG00000006433	Pabpn1l	74	47.317	Jaculus_jaculus
ENSOMEG00000017896	PABPN1L	58	82.326	ENSKMAG00000001112	PABPN1L	100	81.858	Kryptolebias_marmoratus
ENSOMEG00000017896	PABPN1L	74	76.471	ENSLBEG00000011647	PABPN1L	99	79.779	Labrus_bergylta
ENSOMEG00000017896	PABPN1L	53	50.704	ENSMFAG00000002924	PABPN1L	77	50.704	Macaca_fascicularis
ENSOMEG00000017896	PABPN1L	53	50.472	ENSMMUG00000012438	PABPN1L	77	50.472	Macaca_mulatta
ENSOMEG00000017896	PABPN1L	53	50.704	ENSMNEG00000044808	PABPN1L	77	50.704	Macaca_nemestrina
ENSOMEG00000017896	PABPN1L	53	50.235	ENSMLEG00000032667	PABPN1L	77	50.235	Mandrillus_leucophaeus
ENSOMEG00000017896	PABPN1L	72	79.087	ENSMZEG00005002186	PABPN1L	100	80.608	Maylandia_zebra
ENSOMEG00000017896	PABPN1L	52	47.000	ENSMAUG00000014032	Pabpn1l	78	45.238	Mesocricetus_auratus
ENSOMEG00000017896	PABPN1L	55	48.058	ENSMICG00000028179	PABPN1L	73	48.058	Microcebus_murinus
ENSOMEG00000017896	PABPN1L	53	44.286	ENSMOCG00000007955	Pabpn1l	78	44.286	Microtus_ochrogaster
ENSOMEG00000017896	PABPN1L	54	85.859	ENSMMOG00000017714	PABPN1L	86	85.859	Mola_mola
ENSOMEG00000017896	PABPN1L	72	78.244	ENSMALG00000016926	PABPN1L	100	78.244	Monopterus_albus
ENSOMEG00000017896	PABPN1L	54	45.673	MGP_CAROLIEiJ_G0031670	Pabpn1l	76	45.673	Mus_caroli
ENSOMEG00000017896	PABPN1L	59	44.105	ENSMUSG00000069867	Pabpn1l	83	44.105	Mus_musculus
ENSOMEG00000017896	PABPN1L	51	49.231	MGP_PahariEiJ_G0023268	Pabpn1l	71	49.231	Mus_pahari
ENSOMEG00000017896	PABPN1L	58	45.045	MGP_SPRETEiJ_G0032788	Pabpn1l	80	45.045	Mus_spretus
ENSOMEG00000017896	PABPN1L	55	36.564	ENSMLUG00000003228	PABPN1L	80	36.564	Myotis_lucifugus
ENSOMEG00000017896	PABPN1L	55	46.729	ENSNGAG00000023992	Pabpn1l	78	46.729	Nannospalax_galili
ENSOMEG00000017896	PABPN1L	65	81.933	ENSNBRG00000017078	PABPN1L	100	83.193	Neolamprologus_brichardi
ENSOMEG00000017896	PABPN1L	51	55.080	ENSOANG00000013901	PABPN1L	75	52.261	Ornithorhynchus_anatinus
ENSOMEG00000017896	PABPN1L	72	93.077	ENSORLG00000026560	PABPN1L	100	93.077	Oryzias_latipes
ENSOMEG00000017896	PABPN1L	72	93.077	ENSORLG00020015068	PABPN1L	100	93.077	Oryzias_latipes_hni
ENSOMEG00000017896	PABPN1L	72	93.077	ENSORLG00015000397	PABPN1L	100	93.077	Oryzias_latipes_hsok
ENSOMEG00000017896	PABPN1L	51	51.852	ENSOGAG00000000433	PABPN1L	73	49.515	Otolemur_garnettii
ENSOMEG00000017896	PABPN1L	50	51.667	ENSOARG00000013682	PABPN1L	66	49.275	Ovis_aries
ENSOMEG00000017896	PABPN1L	51	52.736	ENSPPAG00000028866	PABPN1L	75	50.952	Pan_paniscus
ENSOMEG00000017896	PABPN1L	51	52.736	ENSPTRG00000031120	PABPN1L	75	50.952	Pan_troglodytes
ENSOMEG00000017896	PABPN1L	56	49.765	ENSPANG00000026039	PABPN1L	75	49.765	Papio_anubis
ENSOMEG00000017896	PABPN1L	58	79.048	ENSPMGG00000013927	PABPN1L	100	78.027	Periophthalmus_magnuspinnatus
ENSOMEG00000017896	PABPN1L	72	81.749	ENSPFOG00000007001	PABPN1L	100	81.749	Poecilia_formosa
ENSOMEG00000017896	PABPN1L	72	81.749	ENSPLAG00000018431	PABPN1L	100	81.749	Poecilia_latipinna
ENSOMEG00000017896	PABPN1L	50	78.261	ENSPMEG00000000169	-	91	78.261	Poecilia_mexicana
ENSOMEG00000017896	PABPN1L	72	81.749	ENSPMEG00000009108	PABPN1L	100	81.749	Poecilia_mexicana
ENSOMEG00000017896	PABPN1L	59	83.410	ENSPREG00000022533	PABPN1L	100	83.117	Poecilia_reticulata
ENSOMEG00000017896	PABPN1L	52	52.308	ENSPPYG00000007655	PABPN1L	73	50.242	Pongo_abelii
ENSOMEG00000017896	PABPN1L	52	50.000	ENSPCOG00000024077	PABPN1L	69	50.000	Propithecus_coquereli
ENSOMEG00000017896	PABPN1L	51	49.000	ENSPVAG00000002716	PABPN1L	76	47.170	Pteropus_vampyrus
ENSOMEG00000017896	PABPN1L	72	79.087	ENSPNYG00000004803	PABPN1L	100	80.608	Pundamilia_nyererei
ENSOMEG00000017896	PABPN1L	54	48.113	ENSRNOG00000029558	Pabpn1l	78	48.113	Rattus_norvegicus
ENSOMEG00000017896	PABPN1L	53	49.296	ENSRBIG00000030740	PABPN1L	77	49.296	Rhinopithecus_bieti
ENSOMEG00000017896	PABPN1L	53	50.235	ENSRROG00000035483	-	77	50.235	Rhinopithecus_roxellana
ENSOMEG00000017896	PABPN1L	54	51.741	ENSRROG00000032240	-	73	50.476	Rhinopithecus_roxellana
ENSOMEG00000017896	PABPN1L	53	50.481	ENSSBOG00000018410	PABPN1L	76	50.481	Saimiri_boliviensis_boliviensis
ENSOMEG00000017896	PABPN1L	72	78.439	ENSSMAG00000021348	PABPN1L	100	79.554	Scophthalmus_maximus
ENSOMEG00000017896	PABPN1L	72	80.608	ENSSDUG00000006986	PABPN1L	100	80.608	Seriola_dumerili
ENSOMEG00000017896	PABPN1L	72	80.989	ENSSLDG00000021845	PABPN1L	100	80.989	Seriola_lalandi_dorsalis
ENSOMEG00000017896	PABPN1L	72	80.989	ENSSPAG00000017978	PABPN1L	100	80.989	Stegastes_partitus
ENSOMEG00000017896	PABPN1L	50	50.532	ENSSSCG00000036367	PABPN1L	76	48.113	Sus_scrofa
ENSOMEG00000017896	PABPN1L	72	72.243	ENSTRUG00000024725	PABPN1L	100	72.243	Takifugu_rubripes
ENSOMEG00000017896	PABPN1L	53	85.938	ENSTNIG00000009416	PABPN1L	100	85.938	Tetraodon_nigroviridis
ENSOMEG00000017896	PABPN1L	50	50.267	ENSTTRG00000004691	PABPN1L	73	49.254	Tursiops_truncatus
ENSOMEG00000017896	PABPN1L	56	83.824	ENSXCOG00000003254	PABPN1L	100	83.117	Xiphophorus_couchianus
ENSOMEG00000017896	PABPN1L	55	85.859	ENSXMAG00000029090	PABPN1L	100	81.614	Xiphophorus_maculatus