EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000017958 (Gene tree)
Gene ID: 112143183
Gene Symbol: si:dkey-34d22.5
Alias: -
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 1955 bases
Position: chrNVQA01000006.1:3953415-3955369
Accession: 112143183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000032515	MMR_HSR1	PF01926.23	8.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000024767	-	1451	-	ENSOMEP00000032515	221 (aa)	XP_024122724	UPI000CF81A07

Gene Model

Click here to download ENSOMEG00000017958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000017958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000017958	si:dkey-34d22.5	75	41.420	ENSOMEG00000000162	rab9a	82	41.420
ENSOMEG00000017958	si:dkey-34d22.5	77	40.351	ENSOMEG00000023625	rab6bb	82	39.024
ENSOMEG00000017958	si:dkey-34d22.5	82	33.871	ENSOMEG00000000336	RAB29	91	33.871
ENSOMEG00000017958	si:dkey-34d22.5	98	32.432	ENSOMEG00000002581	rab11ba	77	37.427
ENSOMEG00000017958	si:dkey-34d22.5	80	39.773	ENSOMEG00000009074	-	85	39.773
ENSOMEG00000017958	si:dkey-34d22.5	80	39.773	ENSOMEG00000006036	rab1ab	85	39.773
ENSOMEG00000017958	si:dkey-34d22.5	97	32.407	ENSOMEG00000020350	rab25b	84	36.047
ENSOMEG00000017958	si:dkey-34d22.5	77	41.520	ENSOMEG00000004379	-	78	41.520
ENSOMEG00000017958	si:dkey-34d22.5	71	32.278	ENSOMEG00000018719	hrasb	88	31.579
ENSOMEG00000017958	si:dkey-34d22.5	85	36.598	ENSOMEG00000017306	rab33a	70	36.598
ENSOMEG00000017958	si:dkey-34d22.5	82	40.331	ENSOMEG00000020594	zgc:171927	83	40.331
ENSOMEG00000017958	si:dkey-34d22.5	77	42.105	ENSOMEG00000008210	rab13	84	42.105
ENSOMEG00000017958	si:dkey-34d22.5	97	57.674	ENSOMEG00000020418	rab42a	87	62.500
ENSOMEG00000017958	si:dkey-34d22.5	76	43.713	ENSOMEG00000007546	rab18b	80	43.713
ENSOMEG00000017958	si:dkey-34d22.5	72	30.488	ENSOMEG00000017890	dnajc27	59	30.488
ENSOMEG00000017958	si:dkey-34d22.5	90	38.725	ENSOMEG00000014206	rab6ba	90	39.594
ENSOMEG00000017958	si:dkey-34d22.5	92	41.262	ENSOMEG00000003623	rab14	91	42.211
ENSOMEG00000017958	si:dkey-34d22.5	71	38.854	ENSOMEG00000001706	rab23	74	38.462
ENSOMEG00000017958	si:dkey-34d22.5	97	32.093	ENSOMEG00000010510	rab25a	83	35.393
ENSOMEG00000017958	si:dkey-34d22.5	79	33.333	ENSOMEG00000010334	rab34b	71	33.333
ENSOMEG00000017958	si:dkey-34d22.5	98	34.259	ENSOMEG00000020271	rab11al	77	38.596
ENSOMEG00000017958	si:dkey-34d22.5	77	41.520	ENSOMEG00000017258	RAB41	77	41.520
ENSOMEG00000017958	si:dkey-34d22.5	75	36.747	ENSOMEG00000023078	rab5c	87	35.500
ENSOMEG00000017958	si:dkey-34d22.5	75	31.765	ENSOMEG00000010545	rasd4	79	31.395
ENSOMEG00000017958	si:dkey-34d22.5	76	43.114	ENSOMEG00000020605	rab18a	80	43.114
ENSOMEG00000017958	si:dkey-34d22.5	98	32.407	ENSOMEG00000017467	rab11a	78	38.012
ENSOMEG00000017958	si:dkey-34d22.5	72	31.902	ENSOMEG00000019524	-	76	31.902
ENSOMEG00000017958	si:dkey-34d22.5	79	35.057	ENSOMEG00000003647	rab34a	57	35.057
ENSOMEG00000017958	si:dkey-34d22.5	75	42.012	ENSOMEG00000009701	RAB9A	83	42.012
ENSOMEG00000017958	si:dkey-34d22.5	86	33.503	ENSOMEG00000017263	-	91	33.503
ENSOMEG00000017958	si:dkey-34d22.5	69	32.680	ENSOMEG00000016685	zgc:55558	87	31.928
ENSOMEG00000017958	si:dkey-34d22.5	76	41.317	ENSOMEG00000001613	rab30	80	41.317
ENSOMEG00000017958	si:dkey-34d22.5	71	33.544	ENSOMEG00000009463	rhebl1	84	33.544
ENSOMEG00000017958	si:dkey-34d22.5	88	31.220	ENSOMEG00000019923	rasl11a	77	31.034
ENSOMEG00000017958	si:dkey-34d22.5	98	50.691	ENSOMEG00000006333	RAB39B	88	55.263
ENSOMEG00000017958	si:dkey-34d22.5	66	32.877	ENSOMEG00000000343	rras	79	32.075
ENSOMEG00000017958	si:dkey-34d22.5	74	32.121	ENSOMEG00000008576	rabl2	72	32.121
ENSOMEG00000017958	si:dkey-34d22.5	76	42.604	ENSOMEG00000018494	-	68	42.604
ENSOMEG00000017958	si:dkey-34d22.5	69	41.667	ENSOMEG00000021726	-	64	41.667
ENSOMEG00000017958	si:dkey-34d22.5	93	32.701	ENSOMEG00000010156	-	81	34.104
ENSOMEG00000017958	si:dkey-34d22.5	97	37.209	ENSOMEG00000016752	rab2a	89	39.378
ENSOMEG00000017958	si:dkey-34d22.5	76	39.053	ENSOMEG00000015474	si:dkey-16l2.16	79	40.237
ENSOMEG00000017958	si:dkey-34d22.5	55	34.426	ENSOMEG00000011161	RAP2B	89	34.074
ENSOMEG00000017958	si:dkey-34d22.5	75	46.667	ENSOMEG00000022002	rab15	76	46.667
ENSOMEG00000017958	si:dkey-34d22.5	75	36.747	ENSOMEG00000010692	rab5aa	75	36.747
ENSOMEG00000017958	si:dkey-34d22.5	80	37.766	ENSOMEG00000008327	rab9b	85	37.766
ENSOMEG00000017958	si:dkey-34d22.5	76	42.857	ENSOMEG00000019462	RAB15	79	42.857
ENSOMEG00000017958	si:dkey-34d22.5	70	30.128	ENSOMEG00000011584	pth2r	69	30.357
ENSOMEG00000017958	si:dkey-34d22.5	77	36.842	ENSOMEG00000002562	-	77	36.842
ENSOMEG00000017958	si:dkey-34d22.5	67	40.000	ENSOMEG00000019819	rab33ba	62	40.000
ENSOMEG00000017958	si:dkey-34d22.5	98	31.982	ENSOMEG00000017806	-	77	36.842
ENSOMEG00000017958	si:dkey-34d22.5	97	50.926	ENSOMEG00000017881	-	88	55.789
ENSOMEG00000017958	si:dkey-34d22.5	72	32.075	ENSOMEG00000011273	kras	88	31.395
ENSOMEG00000017958	si:dkey-34d22.5	67	41.722	ENSOMEG00000013128	zgc:101559	63	41.722
ENSOMEG00000017958	si:dkey-34d22.5	96	35.047	ENSOMEG00000008191	rab12	65	40.373
ENSOMEG00000017958	si:dkey-34d22.5	72	38.889	ENSOMEG00000023716	opn1sw2	77	38.889
ENSOMEG00000017958	si:dkey-34d22.5	89	43.367	ENSOMEG00000009290	-	89	43.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000017958	si:dkey-34d22.5	99	86.878	ENSACIG00000016958	si:dkey-34d22.5	91	89.604	Amphilophus_citrinellus
ENSOMEG00000017958	si:dkey-34d22.5	99	87.783	ENSATEG00000010784	si:dkey-34d22.5	78	91.584	Anabas_testudineus
ENSOMEG00000017958	si:dkey-34d22.5	99	60.000	ENSCPBG00000011236	-	90	64.975	Chrysemys_picta_bellii
ENSOMEG00000017958	si:dkey-34d22.5	99	80.090	ENSCSEG00000019183	si:dkey-34d22.5	91	82.587	Cynoglossus_semilaevis
ENSOMEG00000017958	si:dkey-34d22.5	99	86.878	ENSCVAG00000017064	si:dkey-34d22.5	91	92.040	Cyprinodon_variegatus
ENSOMEG00000017958	si:dkey-34d22.5	84	50.270	ENSDARG00000100379	si:dkey-34d22.2	98	50.543	Danio_rerio
ENSOMEG00000017958	si:dkey-34d22.5	97	59.813	ENSFALG00000001373	-	89	63.542	Ficedula_albicollis
ENSOMEG00000017958	si:dkey-34d22.5	99	86.486	ENSFHEG00000012041	si:dkey-34d22.5	91	91.089	Fundulus_heteroclitus
ENSOMEG00000017958	si:dkey-34d22.5	87	63.542	ENSGALG00000000994	-	90	63.542	Gallus_gallus
ENSOMEG00000017958	si:dkey-34d22.5	99	87.330	ENSGAFG00000008183	si:dkey-34d22.5	91	90.594	Gambusia_affinis
ENSOMEG00000017958	si:dkey-34d22.5	94	58.937	ENSGAGG00000004918	-	90	64.130	Gopherus_agassizii
ENSOMEG00000017958	si:dkey-34d22.5	100	76.018	ENSHCOG00000015692	si:dkey-34d22.5	93	80.100	Hippocampus_comes
ENSOMEG00000017958	si:dkey-34d22.5	99	87.783	ENSKMAG00000012778	si:dkey-34d22.5	91	91.089	Kryptolebias_marmoratus
ENSOMEG00000017958	si:dkey-34d22.5	99	83.258	ENSLBEG00000002926	si:dkey-34d22.5	91	87.065	Labrus_bergylta
ENSOMEG00000017958	si:dkey-34d22.5	89	63.265	ENSLACG00000012674	si:dkey-34d22.5	92	63.265	Latimeria_chalumnae
ENSOMEG00000017958	si:dkey-34d22.5	98	70.833	ENSLOCG00000003467	si:dkey-34d22.5	92	75.879	Lepisosteus_oculatus
ENSOMEG00000017958	si:dkey-34d22.5	99	85.000	ENSMMOG00000006846	si:dkey-34d22.5	91	88.060	Mola_mola
ENSOMEG00000017958	si:dkey-34d22.5	99	81.900	ENSMALG00000013152	si:dkey-34d22.5	91	84.653	Monopterus_albus
ENSOMEG00000017958	si:dkey-34d22.5	100	94.570	ENSORLG00000014099	si:dkey-34d22.5	100	94.570	Oryzias_latipes
ENSOMEG00000017958	si:dkey-34d22.5	100	94.118	ENSORLG00020020277	si:dkey-34d22.5	100	94.118	Oryzias_latipes_hni
ENSOMEG00000017958	si:dkey-34d22.5	100	94.118	ENSORLG00015000142	si:dkey-34d22.5	100	94.118	Oryzias_latipes_hsok
ENSOMEG00000017958	si:dkey-34d22.5	99	75.342	ENSPKIG00000021209	si:dkey-34d22.5	91	80.000	Paramormyrops_kingsleyae
ENSOMEG00000017958	si:dkey-34d22.5	91	63.682	ENSPSIG00000006606	-	99	63.682	Pelodiscus_sinensis
ENSOMEG00000017958	si:dkey-34d22.5	99	85.909	ENSPMGG00000001298	-	99	85.909	Periophthalmus_magnuspinnatus
ENSOMEG00000017958	si:dkey-34d22.5	94	59.420	ENSPCIG00000022399	-	88	61.421	Phascolarctos_cinereus
ENSOMEG00000017958	si:dkey-34d22.5	99	87.783	ENSPFOG00000014499	si:dkey-34d22.5	91	91.089	Poecilia_formosa
ENSOMEG00000017958	si:dkey-34d22.5	99	87.783	ENSPLAG00000007773	si:dkey-34d22.5	91	91.089	Poecilia_latipinna
ENSOMEG00000017958	si:dkey-34d22.5	99	87.783	ENSPMEG00000012932	si:dkey-34d22.5	91	91.089	Poecilia_mexicana
ENSOMEG00000017958	si:dkey-34d22.5	89	60.406	ENSSHAG00000008520	-	87	60.309	Sarcophilus_harrisii
ENSOMEG00000017958	si:dkey-34d22.5	99	69.725	ENSSFOG00015012088	rab42	89	74.747	Scleropages_formosus
ENSOMEG00000017958	si:dkey-34d22.5	99	90.909	ENSSLDG00000002646	si:dkey-34d22.5	91	94.059	Seriola_lalandi_dorsalis
ENSOMEG00000017958	si:dkey-34d22.5	100	90.090	ENSSPAG00000012955	si:dkey-34d22.5	91	93.564	Stegastes_partitus
ENSOMEG00000017958	si:dkey-34d22.5	92	48.276	ENSXETG00000020622	rab39a	84	53.714	Xenopus_tropicalis
ENSOMEG00000017958	si:dkey-34d22.5	99	86.425	ENSXCOG00000008410	si:dkey-34d22.5	91	89.604	Xiphophorus_couchianus
ENSOMEG00000017958	si:dkey-34d22.5	99	86.425	ENSXMAG00000029317	si:dkey-34d22.5	91	89.604	Xiphophorus_maculatus