EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000018020 (Gene tree)
Gene ID: 112160574
Gene Symbol: sfpq
Alias: -
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 20678 bases
Position: chrNVQA01000004.1:14309330-14330007
Accession: 112160574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000016359	RRM_1	PF00076.22	1.5e-28	1	2
ENSOMEP00000016359	RRM_1	PF00076.22	1.5e-28	2	2
ENSOMEP00000032582	RRM_1	PF00076.22	1.5e-28	1	2
ENSOMEP00000032582	RRM_1	PF00076.22	1.5e-28	2	2
ENSOMEP00000016326	RRM_1	PF00076.22	1.6e-28	1	2
ENSOMEP00000016326	RRM_1	PF00076.22	1.6e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000024763	-	5261	-	ENSOMEP00000016326	731 (aa)	XP_024150976	UPI000CF7C239
ENSOMET00000024833	-	2556	-	ENSOMEP00000032582	703 (aa)	-	-
ENSOMET00000024796	-	2475	-	ENSOMEP00000016359	703 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000018020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000018020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000018020	sfpq	56	71.926	ENSAMEG00000000815	SFPQ	98	71.926	Ailuropoda_melanoleuca
ENSOMEG00000018020	sfpq	100	71.661	ENSACIG00000000905	sfpq	100	83.816	Amphilophus_citrinellus
ENSOMEG00000018020	sfpq	66	79.461	ENSAOCG00000002889	sfpq	100	70.596	Amphiprion_ocellaris
ENSOMEG00000018020	sfpq	66	79.461	ENSAPEG00000016556	sfpq	100	70.596	Amphiprion_percula
ENSOMEG00000018020	sfpq	98	76.983	ENSATEG00000002981	sfpq	100	80.538	Anabas_testudineus
ENSOMEG00000018020	sfpq	54	64.128	ENSANAG00000027438	-	92	49.915	Aotus_nancymaae
ENSOMEG00000018020	sfpq	100	66.442	ENSACLG00000022332	sfpq	100	69.959	Astatotilapia_calliptera
ENSOMEG00000018020	sfpq	65	71.959	ENSAMXG00000011538	sfpq	99	57.218	Astyanax_mexicanus
ENSOMEG00000018020	sfpq	56	71.926	ENSBTAG00000016328	SFPQ	99	52.480	Bos_taurus
ENSOMEG00000018020	sfpq	54	69.870	ENSCAFG00000017608	-	75	61.014	Canis_familiaris
ENSOMEG00000018020	sfpq	59	66.741	ENSCAFG00000018271	-	75	61.840	Canis_familiaris
ENSOMEG00000018020	sfpq	56	71.926	ENSCAFG00000003595	-	99	52.918	Canis_familiaris
ENSOMEG00000018020	sfpq	59	66.741	ENSCAFG00020004881	-	93	55.981	Canis_lupus_dingo
ENSOMEG00000018020	sfpq	56	71.926	ENSCHIG00000023097	SFPQ	99	52.208	Capra_hircus
ENSOMEG00000018020	sfpq	56	49.315	ENSCATG00000032664	-	99	40.026	Cercocebus_atys
ENSOMEG00000018020	sfpq	50	74.719	ENSCATG00000036179	-	87	55.887	Cercocebus_atys
ENSOMEG00000018020	sfpq	50	69.816	ENSCHOG00000009131	SFPQ	100	69.816	Choloepus_hoffmanni
ENSOMEG00000018020	sfpq	56	71.264	ENSCPBG00000018674	SFPQ	81	63.277	Chrysemys_picta_bellii
ENSOMEG00000018020	sfpq	58	69.820	ENSCGRG00001011698	Sfpq	99	52.437	Cricetulus_griseus_chok1gshd
ENSOMEG00000018020	sfpq	56	71.395	ENSCGRG00000010128	Sfpq	95	71.462	Cricetulus_griseus_crigri
ENSOMEG00000018020	sfpq	72	72.917	ENSCSEG00000007852	sfpq	100	62.022	Cynoglossus_semilaevis
ENSOMEG00000018020	sfpq	100	67.017	ENSCVAG00000019538	sfpq	100	67.230	Cyprinodon_variegatus
ENSOMEG00000018020	sfpq	58	75.935	ENSDARG00000011564	sfpq	100	87.826	Danio_rerio
ENSOMEG00000018020	sfpq	56	71.926	ENSDNOG00000049454	SFPQ	99	53.576	Dasypus_novemcinctus
ENSOMEG00000018020	sfpq	56	71.926	ENSDORG00000008109	Sfpq	71	64.854	Dipodomys_ordii
ENSOMEG00000018020	sfpq	56	65.429	ENSETEG00000001095	SFPQ	61	61.319	Echinops_telfairi
ENSOMEG00000018020	sfpq	55	73.028	ENSEASG00005012012	SFPQ	87	53.693	Equus_asinus_asinus
ENSOMEG00000018020	sfpq	55	73.028	ENSECAG00000000642	SFPQ	87	53.693	Equus_caballus
ENSOMEG00000018020	sfpq	60	75.682	ENSELUG00000023145	sfpq	99	55.935	Esox_lucius
ENSOMEG00000018020	sfpq	56	71.926	ENSFCAG00000042862	SFPQ	99	52.062	Felis_catus
ENSOMEG00000018020	sfpq	100	66.971	ENSFHEG00000015200	sfpq	100	69.934	Fundulus_heteroclitus
ENSOMEG00000018020	sfpq	76	81.340	ENSGMOG00000011950	SFPQ	99	81.579	Gadus_morhua
ENSOMEG00000018020	sfpq	54	73.969	ENSGALG00000002514	SFPQ	99	53.519	Gallus_gallus
ENSOMEG00000018020	sfpq	100	69.304	ENSGAFG00000014571	sfpq	100	68.750	Gambusia_affinis
ENSOMEG00000018020	sfpq	95	78.807	ENSGACG00000002034	sfpq	100	66.214	Gasterosteus_aculeatus
ENSOMEG00000018020	sfpq	56	71.926	ENSGGOG00000026354	SFPQ	100	69.886	Gorilla_gorilla
ENSOMEG00000018020	sfpq	100	69.919	ENSHBUG00000016818	sfpq	100	69.418	Haplochromis_burtoni
ENSOMEG00000018020	sfpq	56	71.429	ENSHGLG00000012001	SFPQ	85	58.199	Heterocephalus_glaber_female
ENSOMEG00000018020	sfpq	100	62.176	ENSHCOG00000008612	sfpq	100	68.553	Hippocampus_comes
ENSOMEG00000018020	sfpq	58	72.454	ENSIPUG00000013076	SFPQ	97	76.336	Ictalurus_punctatus
ENSOMEG00000018020	sfpq	56	71.926	ENSJJAG00000015633	Sfpq	99	53.412	Jaculus_jaculus
ENSOMEG00000018020	sfpq	100	68.010	ENSKMAG00000000238	sfpq	100	66.208	Kryptolebias_marmoratus
ENSOMEG00000018020	sfpq	100	63.685	ENSLBEG00000003163	sfpq	98	67.867	Labrus_bergylta
ENSOMEG00000018020	sfpq	60	65.000	ENSLACG00000014728	SFPQ	80	65.870	Latimeria_chalumnae
ENSOMEG00000018020	sfpq	52	77.507	ENSLOCG00000001067	sfpq	97	71.154	Lepisosteus_oculatus
ENSOMEG00000018020	sfpq	56	71.694	ENSLAFG00000015951	SFPQ	91	58.833	Loxodonta_africana
ENSOMEG00000018020	sfpq	56	71.926	ENSMFAG00000000797	SFPQ	99	53.704	Macaca_fascicularis
ENSOMEG00000018020	sfpq	56	71.926	ENSMMUG00000019154	SFPQ	99	53.704	Macaca_mulatta
ENSOMEG00000018020	sfpq	56	71.926	ENSMNEG00000038895	SFPQ	99	53.836	Macaca_nemestrina
ENSOMEG00000018020	sfpq	94	75.728	ENSMAMG00000007875	sfpq	100	65.442	Mastacembelus_armatus
ENSOMEG00000018020	sfpq	100	68.873	ENSMZEG00005026091	sfpq	100	69.147	Maylandia_zebra
ENSOMEG00000018020	sfpq	50	68.878	ENSMGAG00000004237	SFPQ	100	68.622	Meleagris_gallopavo
ENSOMEG00000018020	sfpq	58	69.820	ENSMAUG00000006402	Sfpq	99	52.306	Mesocricetus_auratus
ENSOMEG00000018020	sfpq	56	71.926	ENSMICG00000027265	SFPQ	99	53.289	Microcebus_murinus
ENSOMEG00000018020	sfpq	58	67.342	ENSMOCG00000019075	Sfpq	91	67.342	Microtus_ochrogaster
ENSOMEG00000018020	sfpq	100	64.490	ENSMMOG00000001074	sfpq	100	64.411	Mola_mola
ENSOMEG00000018020	sfpq	100	72.029	ENSMALG00000010381	sfpq	100	65.578	Monopterus_albus
ENSOMEG00000018020	sfpq	58	70.295	MGP_CAROLIEiJ_G0026487	Sfpq	99	52.493	Mus_caroli
ENSOMEG00000018020	sfpq	58	70.295	ENSMUSG00000028820	Sfpq	99	52.493	Mus_musculus
ENSOMEG00000018020	sfpq	58	70.295	MGP_PahariEiJ_G0028818	Sfpq	99	52.225	Mus_pahari
ENSOMEG00000018020	sfpq	58	70.295	MGP_SPRETEiJ_G0027466	Sfpq	99	52.493	Mus_spretus
ENSOMEG00000018020	sfpq	56	71.694	ENSMLUG00000027090	SFPQ	96	71.694	Myotis_lucifugus
ENSOMEG00000018020	sfpq	58	70.522	ENSNGAG00000000888	Sfpq	62	70.748	Nannospalax_galili
ENSOMEG00000018020	sfpq	100	68.157	ENSNBRG00000017479	sfpq	100	69.418	Neolamprologus_brichardi
ENSOMEG00000018020	sfpq	56	71.795	ENSMEUG00000014082	SFPQ	61	72.028	Notamacropus_eugenii
ENSOMEG00000018020	sfpq	56	71.926	ENSOPRG00000013696	SFPQ	62	70.909	Ochotona_princeps
ENSOMEG00000018020	sfpq	55	62.919	ENSODEG00000005485	SFPQ	91	55.469	Octodon_degus
ENSOMEG00000018020	sfpq	100	68.835	ENSONIG00000017737	sfpq	100	68.776	Oreochromis_niloticus
ENSOMEG00000018020	sfpq	70	62.830	ENSOCUG00000001877	SFPQ	99	64.706	Oryctolagus_cuniculus
ENSOMEG00000018020	sfpq	100	87.534	ENSORLG00000007459	sfpq	100	88.482	Oryzias_latipes
ENSOMEG00000018020	sfpq	100	87.686	ENSORLG00020011818	sfpq	100	88.633	Oryzias_latipes_hni
ENSOMEG00000018020	sfpq	100	86.604	ENSORLG00015002131	sfpq	100	88.363	Oryzias_latipes_hsok
ENSOMEG00000018020	sfpq	56	71.926	ENSOGAG00000027710	SFPQ	96	63.688	Otolemur_garnettii
ENSOMEG00000018020	sfpq	56	71.926	ENSOARG00000019439	SFPQ	66	71.926	Ovis_aries
ENSOMEG00000018020	sfpq	56	71.926	ENSPPAG00000030078	SFPQ	61	72.158	Pan_paniscus
ENSOMEG00000018020	sfpq	56	66.125	ENSPTRG00000000518	SFPQ	99	50.462	Pan_troglodytes
ENSOMEG00000018020	sfpq	56	71.926	ENSPANG00000005380	SFPQ	75	63.688	Papio_anubis
ENSOMEG00000018020	sfpq	64	69.899	ENSPKIG00000023035	sfpq	95	66.425	Paramormyrops_kingsleyae
ENSOMEG00000018020	sfpq	56	71.926	ENSPSIG00000011494	SFPQ	99	71.694	Pelodiscus_sinensis
ENSOMEG00000018020	sfpq	78	83.188	ENSPMGG00000023883	sfpq	100	69.665	Periophthalmus_magnuspinnatus
ENSOMEG00000018020	sfpq	58	69.820	ENSPEMG00000009794	Sfpq	91	69.820	Peromyscus_maniculatus_bairdii
ENSOMEG00000018020	sfpq	56	71.860	ENSPCIG00000000923	SFPQ	99	53.590	Phascolarctos_cinereus
ENSOMEG00000018020	sfpq	100	73.043	ENSPFOG00000003127	sfpq	100	67.969	Poecilia_formosa
ENSOMEG00000018020	sfpq	100	69.492	ENSPREG00000008060	sfpq	100	68.316	Poecilia_reticulata
ENSOMEG00000018020	sfpq	56	71.395	ENSPCAG00000006164	SFPQ	60	71.628	Procavia_capensis
ENSOMEG00000018020	sfpq	56	71.926	ENSPCOG00000027127	SFPQ	99	53.228	Propithecus_coquereli
ENSOMEG00000018020	sfpq	56	69.930	ENSPVAG00000001865	SFPQ	99	50.902	Pteropus_vampyrus
ENSOMEG00000018020	sfpq	100	67.838	ENSPNYG00000007494	sfpq	100	70.350	Pundamilia_nyererei
ENSOMEG00000018020	sfpq	81	63.953	ENSPNAG00000002128	sfpq	71	79.952	Pygocentrus_nattereri
ENSOMEG00000018020	sfpq	58	70.295	ENSRNOG00000058461	Sfpq	99	52.425	Rattus_norvegicus
ENSOMEG00000018020	sfpq	57	65.227	ENSRBIG00000035286	SFPQ	100	69.886	Rhinopithecus_bieti
ENSOMEG00000018020	sfpq	56	71.926	ENSRROG00000040992	SFPQ	100	69.886	Rhinopithecus_roxellana
ENSOMEG00000018020	sfpq	54	73.766	ENSSHAG00000016107	-	96	68.527	Sarcophilus_harrisii
ENSOMEG00000018020	sfpq	68	68.979	ENSSFOG00015009289	sfpq	92	70.238	Scleropages_formosus
ENSOMEG00000018020	sfpq	100	62.534	ENSSMAG00000018201	sfpq	100	79.739	Scophthalmus_maximus
ENSOMEG00000018020	sfpq	98	78.926	ENSSDUG00000008402	sfpq	100	66.756	Seriola_dumerili
ENSOMEG00000018020	sfpq	100	76.834	ENSSLDG00000018917	sfpq	100	65.499	Seriola_lalandi_dorsalis
ENSOMEG00000018020	sfpq	93	82.751	ENSSPAG00000016550	sfpq	100	68.919	Stegastes_partitus
ENSOMEG00000018020	sfpq	56	71.926	ENSSSCG00000035690	SFPQ	99	53.169	Sus_scrofa
ENSOMEG00000018020	sfpq	54	73.969	ENSTGUG00000001722	SFPQ	99	71.926	Taeniopygia_guttata
ENSOMEG00000018020	sfpq	100	67.663	ENSTRUG00000003783	sfpq	100	66.667	Takifugu_rubripes
ENSOMEG00000018020	sfpq	87	65.033	ENSTNIG00000011331	sfpq	99	66.370	Tetraodon_nigroviridis
ENSOMEG00000018020	sfpq	56	69.767	ENSTTRG00000013930	SFPQ	99	51.769	Tursiops_truncatus
ENSOMEG00000018020	sfpq	50	74.366	ENSXETG00000009682	sfpq	98	76.338	Xenopus_tropicalis
ENSOMEG00000018020	sfpq	100	69.620	ENSXMAG00000016391	sfpq	100	68.917	Xiphophorus_maculatus