EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000018226 (Gene tree)
Gene ID: 112136893
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 4240 bases
Position: chrNVQA01000004.1:14246575-14250814
Accession: 112136893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000016582	GTP_EFTU	PF00009.27	1.1e-53	1	1
ENSOMEP00000016582	GTP_EFTU_D2	PF03144.25	8.4e-15	1	1
ENSOMEP00000016582	GTP_EFTU_D3	PF03143.17	5.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000025075	-	2778	-	ENSOMEP00000016582	461 (aa)	XP_024114651	UPI000CF7BDDE

Gene Model

Click here to download ENSOMEG00000018226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000018226's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000018226	-	90	89.855	ENSOMEG00000006888	-	97	90.750
ENSOMEG00000018226	-	96	38.600	ENSOMEG00000002739	gspt1l	76	38.952
ENSOMEG00000018226	-	100	90.693	ENSOMEG00000018209	-	97	91.518
ENSOMEG00000018226	-	98	70.199	ENSOMEG00000001868	si:dkey-37o8.1	98	70.246
ENSOMEG00000018226	-	100	87.879	ENSOMEG00000023456	eef1a1b	98	88.496
ENSOMEG00000018226	-	95	41.136	ENSOMEG00000016715	hbs1l	61	41.136
ENSOMEG00000018226	-	96	30.155	ENSOMEG00000016958	tufm	87	30.155
ENSOMEG00000018226	-	95	38.322	ENSOMEG00000008108	-	82	37.246

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000018226	-	100	94.794	ENSAPOG00000004714	-	100	94.794	Acanthochromis_polyacanthus
ENSOMEG00000018226	-	90	95.400	ENSACIG00000001219	-	97	95.533	Amphilophus_citrinellus
ENSOMEG00000018226	-	100	90.889	ENSAOCG00000022039	-	98	91.353	Amphiprion_ocellaris
ENSOMEG00000018226	-	90	96.368	ENSAOCG00000022002	-	100	96.368	Amphiprion_ocellaris
ENSOMEG00000018226	-	100	91.540	ENSAPEG00000016361	-	98	92.018	Amphiprion_percula
ENSOMEG00000018226	-	100	96.746	ENSATEG00000003244	-	97	96.746	Anabas_testudineus
ENSOMEG00000018226	-	100	95.662	ENSACLG00000022560	-	98	95.787	Astatotilapia_calliptera
ENSOMEG00000018226	-	100	82.900	WBGene00001169	eef-1A.2	98	83.407	Caenorhabditis_elegans
ENSOMEG00000018226	-	100	82.900	WBGene00001168	eef-1A.1	98	83.407	Caenorhabditis_elegans
ENSOMEG00000018226	-	99	84.279	ENSCING00000021478	-	98	84.855	Ciona_intestinalis
ENSOMEG00000018226	-	98	81.538	ENSCING00000005126	-	98	81.538	Ciona_intestinalis
ENSOMEG00000018226	-	98	80.837	ENSCING00000018894	-	97	80.837	Ciona_intestinalis
ENSOMEG00000018226	-	100	78.541	ENSCING00000007703	-	97	78.728	Ciona_intestinalis
ENSOMEG00000018226	-	98	82.857	ENSCSAVG00000009663	-	98	82.857	Ciona_savignyi
ENSOMEG00000018226	-	98	80.828	ENSCSAVG00000003196	-	98	80.828	Ciona_savignyi
ENSOMEG00000018226	-	99	84.245	ENSCSAVG00000006357	-	96	94.000	Ciona_savignyi
ENSOMEG00000018226	-	99	76.471	ENSCSAVG00000001085	-	89	77.578	Ciona_savignyi
ENSOMEG00000018226	-	89	85.194	ENSCSEG00000007992	-	97	85.360	Cynoglossus_semilaevis
ENSOMEG00000018226	-	98	95.344	ENSCSEG00000008011	-	98	95.344	Cynoglossus_semilaevis
ENSOMEG00000018226	-	90	85.749	ENSCSEG00000007972	-	98	86.139	Cynoglossus_semilaevis
ENSOMEG00000018226	-	100	98.698	ENSCVAG00000019356	-	100	98.698	Cyprinodon_variegatus
ENSOMEG00000018226	-	100	86.147	FBgn0284245	eEF1alpha1	97	86.607	Drosophila_melanogaster
ENSOMEG00000018226	-	98	85.177	FBgn0000557	eEF1alpha2	98	85.177	Drosophila_melanogaster
ENSOMEG00000018226	-	99	82.391	ENSEBUG00000015814	-	98	82.927	Eptatretus_burgeri
ENSOMEG00000018226	-	100	98.915	ENSFHEG00000015054	-	100	98.915	Fundulus_heteroclitus
ENSOMEG00000018226	-	100	98.048	ENSGAFG00000014646	-	100	98.048	Gambusia_affinis
ENSOMEG00000018226	-	98	95.344	ENSGACG00000002182	-	98	95.344	Gasterosteus_aculeatus
ENSOMEG00000018226	-	100	93.492	ENSGACG00000002143	-	98	93.792	Gasterosteus_aculeatus
ENSOMEG00000018226	-	55	93.676	ENSHBUG00000017166	-	91	93.827	Haplochromis_burtoni
ENSOMEG00000018226	-	98	95.344	ENSHCOG00000008468	-	98	95.344	Hippocampus_comes
ENSOMEG00000018226	-	99	85.249	ENSHCOG00000008489	-	97	85.491	Hippocampus_comes
ENSOMEG00000018226	-	98	94.678	ENSLBEG00000002759	-	98	94.678	Labrus_bergylta
ENSOMEG00000018226	-	99	84.565	ENSLBEG00000002955	-	98	84.701	Labrus_bergylta
ENSOMEG00000018226	-	100	98.265	ENSMAMG00000007715	-	100	98.265	Mastacembelus_armatus
ENSOMEG00000018226	-	99	76.316	ENSMMOG00000018160	-	95	86.957	Mola_mola
ENSOMEG00000018226	-	99	86.739	ENSMMOG00000001106	-	98	87.140	Mola_mola
ENSOMEG00000018226	-	98	94.013	ENSMMOG00000001165	-	100	95.455	Mola_mola
ENSOMEG00000018226	-	100	85.033	ENSNBRG00000017346	-	97	84.922	Neolamprologus_brichardi
ENSOMEG00000018226	-	76	92.898	ENSONIG00000017760	-	98	92.898	Oreochromis_niloticus
ENSOMEG00000018226	-	100	98.915	ENSORLG00000007614	eef1a	100	98.915	Oryzias_latipes
ENSOMEG00000018226	-	100	98.915	ENSORLG00015002397	-	100	98.915	Oryzias_latipes_hsok
ENSOMEG00000018226	-	98	95.133	ENSPMGG00000023911	-	99	95.333	Periophthalmus_magnuspinnatus
ENSOMEG00000018226	-	95	48.747	ENSPMGG00000022427	-	97	60.000	Periophthalmus_magnuspinnatus
ENSOMEG00000018226	-	100	98.265	ENSPFOG00000003924	-	100	98.063	Poecilia_formosa
ENSOMEG00000018226	-	100	98.265	ENSPLAG00000004316	-	100	98.265	Poecilia_latipinna
ENSOMEG00000018226	-	100	98.048	ENSPMEG00000001010	-	100	98.048	Poecilia_mexicana
ENSOMEG00000018226	-	100	97.614	ENSPREG00000008243	-	100	97.614	Poecilia_reticulata
ENSOMEG00000018226	-	100	95.662	ENSPNYG00000007263	-	98	95.787	Pundamilia_nyererei
ENSOMEG00000018226	-	97	81.124	YPR080W	TEF1	98	80.488	Saccharomyces_cerevisiae
ENSOMEG00000018226	-	97	81.124	YBR118W	TEF2	98	80.488	Saccharomyces_cerevisiae
ENSOMEG00000018226	-	98	83.298	ENSSMAG00000018469	-	98	83.298	Scophthalmus_maximus
ENSOMEG00000018226	-	53	93.033	ENSSMAG00000016277	-	96	93.033	Scophthalmus_maximus
ENSOMEG00000018226	-	100	96.529	ENSSDUG00000008198	-	100	96.529	Seriola_dumerili
ENSOMEG00000018226	-	98	94.013	ENSSPAG00000001710	-	98	94.013	Stegastes_partitus
ENSOMEG00000018226	-	99	86.304	ENSTRUG00000005066	-	98	86.696	Takifugu_rubripes
ENSOMEG00000018226	-	98	95.122	ENSTRUG00000005727	ef-1a	98	95.122	Takifugu_rubripes
ENSOMEG00000018226	-	99	82.609	ENSTNIG00000002617	-	94	84.410	Tetraodon_nigroviridis
ENSOMEG00000018226	-	98	95.787	ENSTNIG00000002619	-	98	95.787	Tetraodon_nigroviridis
ENSOMEG00000018226	-	100	98.265	ENSXCOG00000001542	-	100	98.889	Xiphophorus_couchianus