EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000018588 (Gene tree)
Gene ID: 112161314
Gene Symbol: lin7c
Alias: -
Full Name: 60S acidic ribosomal protein P2-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 12440 bases
Position: chrNVQA01000027.1:20323395-20335834
Accession: 112161314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000032889	Ribosomal_60s	PF00428.19	1.8e-24	1	1
ENSOMEP00000032898	Ribosomal_60s	PF00428.19	6.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000025532	-	1438	-	ENSOMEP00000032889	115 (aa)	XP_024152181	UPI000CF7D117
ENSOMET00000025564	-	1209	-	ENSOMEP00000032898	287 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000018588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000018588's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000018588	lin7c	100	74.783	ENSOMEG00000014592	rplp2	98	73.109

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000018588	lin7c	100	98.955	ENSORLG00000005892	lin7c	100	98.955	Oryzias_latipes