EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000018860 (Gene tree)
Gene ID: 112144745
Gene Symbol: tarbp2
Alias: -
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 8834 bases
Position: chrNVQA01000009.1:12011299-12020132
Accession: 112144745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000017190	dsrm	PF00035.26	5.8e-35	1	2
ENSOMEP00000017190	dsrm	PF00035.26	5.8e-35	2	2
ENSOMEP00000017190	DND1_DSRM	PF14709.7	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000034716	-	3920	-	ENSOMEP00000017190	345 (aa)	XP_024125243	UPI000CF7FA98

Gene Model

Click here to download ENSOMEG00000018860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000018860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000018860	tarbp2	93	45.000	ENSOMEG00000005162	prkra	91	45.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000018860	tarbp2	100	65.027	ENSG00000139546	TARBP2	88	92.208	Homo_sapiens
ENSOMEG00000018860	tarbp2	100	92.174	ENSAPOG00000019892	tarbp2	100	92.174	Acanthochromis_polyacanthus
ENSOMEG00000018860	tarbp2	100	64.754	ENSAMEG00000012601	TARBP2	100	64.674	Ailuropoda_melanoleuca
ENSOMEG00000018860	tarbp2	100	90.145	ENSACIG00000016780	tarbp2	100	90.145	Amphilophus_citrinellus
ENSOMEG00000018860	tarbp2	100	92.174	ENSAOCG00000005201	tarbp2	100	92.174	Amphiprion_ocellaris
ENSOMEG00000018860	tarbp2	100	92.174	ENSAPEG00000008376	tarbp2	100	92.174	Amphiprion_percula
ENSOMEG00000018860	tarbp2	100	91.594	ENSATEG00000025012	tarbp2	100	91.594	Anabas_testudineus
ENSOMEG00000018860	tarbp2	100	67.956	ENSACAG00000001100	TARBP2	100	67.956	Anolis_carolinensis
ENSOMEG00000018860	tarbp2	100	64.481	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSOMEG00000018860	tarbp2	97	88.955	ENSACLG00000018569	tarbp2	97	88.955	Astatotilapia_calliptera
ENSOMEG00000018860	tarbp2	100	81.638	ENSAMXG00000016665	tarbp2	100	84.682	Astyanax_mexicanus
ENSOMEG00000018860	tarbp2	100	63.612	ENSBTAG00000000435	TARBP2	100	64.946	Bos_taurus
ENSOMEG00000018860	tarbp2	100	64.481	ENSCJAG00000018668	TARBP2	100	65.027	Callithrix_jacchus
ENSOMEG00000018860	tarbp2	100	68.012	ENSCAFG00000006874	TARBP2	100	68.012	Canis_familiaris
ENSOMEG00000018860	tarbp2	100	65.027	ENSCAFG00020020735	TARBP2	100	66.957	Canis_lupus_dingo
ENSOMEG00000018860	tarbp2	100	64.324	ENSCHIG00000026017	TARBP2	100	64.247	Capra_hircus
ENSOMEG00000018860	tarbp2	100	65.301	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSOMEG00000018860	tarbp2	63	68.326	ENSCAPG00000008981	TARBP2	98	68.326	Cavia_aperea
ENSOMEG00000018860	tarbp2	100	64.208	ENSCPOG00000001009	TARBP2	100	64.208	Cavia_porcellus
ENSOMEG00000018860	tarbp2	97	66.011	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSOMEG00000018860	tarbp2	100	64.754	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSOMEG00000018860	tarbp2	100	64.208	ENSCLAG00000009175	TARBP2	100	64.208	Chinchilla_lanigera
ENSOMEG00000018860	tarbp2	100	64.754	ENSCSAG00000005479	TARBP2	100	64.674	Chlorocebus_sabaeus
ENSOMEG00000018860	tarbp2	100	67.867	ENSCPBG00000000654	TARBP2	100	70.294	Chrysemys_picta_bellii
ENSOMEG00000018860	tarbp2	100	65.027	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSOMEG00000018860	tarbp2	100	64.658	ENSCGRG00001011856	TARBP2	100	64.658	Cricetulus_griseus_chok1gshd
ENSOMEG00000018860	tarbp2	100	64.658	ENSCGRG00000009088	TARBP2	100	66.255	Cricetulus_griseus_crigri
ENSOMEG00000018860	tarbp2	100	88.406	ENSCSEG00000010631	tarbp2	100	88.406	Cynoglossus_semilaevis
ENSOMEG00000018860	tarbp2	100	91.594	ENSCVAG00000009832	tarbp2	100	91.594	Cyprinodon_variegatus
ENSOMEG00000018860	tarbp2	100	81.609	ENSDARG00000070471	tarbp2	100	82.184	Danio_rerio
ENSOMEG00000018860	tarbp2	100	64.754	ENSDNOG00000002144	TARBP2	100	64.481	Dasypus_novemcinctus
ENSOMEG00000018860	tarbp2	64	68.304	ENSDORG00000001390	Tarbp2	92	68.304	Dipodomys_ordii
ENSOMEG00000018860	tarbp2	86	80.612	ENSETEG00000002458	TARBP2	82	80.612	Echinops_telfairi
ENSOMEG00000018860	tarbp2	95	58.716	ENSEBUG00000002377	tarbp2	98	59.633	Eptatretus_burgeri
ENSOMEG00000018860	tarbp2	100	65.301	ENSEASG00005010030	TARBP2	100	65.217	Equus_asinus_asinus
ENSOMEG00000018860	tarbp2	100	67.236	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSOMEG00000018860	tarbp2	84	61.218	ENSEEUG00000001128	-	99	61.218	Erinaceus_europaeus
ENSOMEG00000018860	tarbp2	100	83.621	ENSELUG00000010642	tarbp2	100	85.057	Esox_lucius
ENSOMEG00000018860	tarbp2	100	65.301	ENSFCAG00000007757	TARBP2	100	65.301	Felis_catus
ENSOMEG00000018860	tarbp2	100	65.301	ENSFDAG00000011932	TARBP2	100	67.623	Fukomys_damarensis
ENSOMEG00000018860	tarbp2	94	90.432	ENSFHEG00000016118	tarbp2	100	90.432	Fundulus_heteroclitus
ENSOMEG00000018860	tarbp2	100	84.726	ENSGMOG00000001290	tarbp2	100	84.726	Gadus_morhua
ENSOMEG00000018860	tarbp2	63	72.146	ENSGALG00000038939	-	83	72.146	Gallus_gallus
ENSOMEG00000018860	tarbp2	100	91.014	ENSGAFG00000013341	tarbp2	100	91.014	Gambusia_affinis
ENSOMEG00000018860	tarbp2	100	87.606	ENSGACG00000006645	tarbp2	100	87.887	Gasterosteus_aculeatus
ENSOMEG00000018860	tarbp2	100	68.144	ENSGAGG00000021169	TARBP2	100	67.867	Gopherus_agassizii
ENSOMEG00000018860	tarbp2	97	66.573	ENSGGOG00000012637	TARBP2	81	85.938	Gorilla_gorilla
ENSOMEG00000018860	tarbp2	100	91.884	ENSHBUG00000018639	tarbp2	100	91.884	Haplochromis_burtoni
ENSOMEG00000018860	tarbp2	100	64.754	ENSHGLG00000001284	TARBP2	100	64.754	Heterocephalus_glaber_female
ENSOMEG00000018860	tarbp2	100	64.754	ENSHGLG00100011274	TARBP2	100	64.754	Heterocephalus_glaber_male
ENSOMEG00000018860	tarbp2	100	85.507	ENSHCOG00000001027	tarbp2	100	85.507	Hippocampus_comes
ENSOMEG00000018860	tarbp2	100	81.948	ENSIPUG00000023701	tarbp2	100	81.948	Ictalurus_punctatus
ENSOMEG00000018860	tarbp2	97	66.854	ENSSTOG00000003678	TARBP2	100	68.033	Ictidomys_tridecemlineatus
ENSOMEG00000018860	tarbp2	100	91.884	ENSKMAG00000012142	tarbp2	100	91.884	Kryptolebias_marmoratus
ENSOMEG00000018860	tarbp2	100	90.678	ENSLBEG00000015027	tarbp2	100	90.678	Labrus_bergylta
ENSOMEG00000018860	tarbp2	74	91.228	ENSLACG00000007087	TARBP2	95	63.314	Latimeria_chalumnae
ENSOMEG00000018860	tarbp2	100	79.885	ENSLOCG00000005711	tarbp2	100	79.885	Lepisosteus_oculatus
ENSOMEG00000018860	tarbp2	72	62.687	ENSLAFG00000002620	TARBP2	95	61.940	Loxodonta_africana
ENSOMEG00000018860	tarbp2	100	64.754	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSOMEG00000018860	tarbp2	100	64.754	ENSMMUG00000018492	TARBP2	100	64.674	Macaca_mulatta
ENSOMEG00000018860	tarbp2	100	64.754	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSOMEG00000018860	tarbp2	100	64.754	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSOMEG00000018860	tarbp2	95	89.297	ENSMAMG00000010272	tarbp2	97	87.427	Mastacembelus_armatus
ENSOMEG00000018860	tarbp2	100	91.304	ENSMZEG00005006895	tarbp2	100	91.304	Maylandia_zebra
ENSOMEG00000018860	tarbp2	100	64.932	ENSMAUG00000019805	Tarbp2	100	64.932	Mesocricetus_auratus
ENSOMEG00000018860	tarbp2	94	67.246	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSOMEG00000018860	tarbp2	100	64.932	ENSMOCG00000003691	Tarbp2	100	64.932	Microtus_ochrogaster
ENSOMEG00000018860	tarbp2	94	88.485	ENSMMOG00000010374	tarbp2	100	88.485	Mola_mola
ENSOMEG00000018860	tarbp2	100	92.174	ENSMALG00000009773	tarbp2	100	92.174	Monopterus_albus
ENSOMEG00000018860	tarbp2	100	65.205	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSOMEG00000018860	tarbp2	100	65.205	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSOMEG00000018860	tarbp2	100	65.205	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSOMEG00000018860	tarbp2	100	65.205	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSOMEG00000018860	tarbp2	100	65.123	ENSMPUG00000005944	TARBP2	100	65.479	Mustela_putorius_furo
ENSOMEG00000018860	tarbp2	100	65.301	ENSMLUG00000010035	TARBP2	100	65.489	Myotis_lucifugus
ENSOMEG00000018860	tarbp2	100	65.027	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSOMEG00000018860	tarbp2	100	68.116	ENSMEUG00000001916	TARBP2	100	68.116	Notamacropus_eugenii
ENSOMEG00000018860	tarbp2	63	69.683	ENSOPRG00000011397	TARBP2	98	69.683	Ochotona_princeps
ENSOMEG00000018860	tarbp2	60	69.469	ENSODEG00000013413	TARBP2	100	69.469	Octodon_degus
ENSOMEG00000018860	tarbp2	95	86.207	ENSONIG00000005115	tarbp2	96	86.207	Oreochromis_niloticus
ENSOMEG00000018860	tarbp2	100	66.485	ENSOCUG00000005700	TARBP2	100	66.485	Oryctolagus_cuniculus
ENSOMEG00000018860	tarbp2	100	96.812	ENSORLG00000005209	tarbp2	100	96.812	Oryzias_latipes
ENSOMEG00000018860	tarbp2	100	96.812	ENSORLG00020017755	tarbp2	100	96.812	Oryzias_latipes_hni
ENSOMEG00000018860	tarbp2	100	96.812	ENSORLG00015013237	tarbp2	100	96.812	Oryzias_latipes_hsok
ENSOMEG00000018860	tarbp2	100	65.041	ENSOGAG00000001744	TARBP2	100	65.041	Otolemur_garnettii
ENSOMEG00000018860	tarbp2	100	63.342	ENSOARG00000016437	TARBP2	100	64.674	Ovis_aries
ENSOMEG00000018860	tarbp2	100	65.027	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSOMEG00000018860	tarbp2	100	65.301	ENSPPRG00000000189	TARBP2	100	65.301	Panthera_pardus
ENSOMEG00000018860	tarbp2	100	66.667	ENSPTIG00000007859	TARBP2	100	66.667	Panthera_tigris_altaica
ENSOMEG00000018860	tarbp2	100	65.027	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSOMEG00000018860	tarbp2	100	64.754	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSOMEG00000018860	tarbp2	100	79.775	ENSPKIG00000002455	tarbp2	100	79.775	Paramormyrops_kingsleyae
ENSOMEG00000018860	tarbp2	100	88.406	ENSPMGG00000006497	tarbp2	100	88.406	Periophthalmus_magnuspinnatus
ENSOMEG00000018860	tarbp2	100	63.836	ENSPEMG00000014285	Tarbp2	100	63.836	Peromyscus_maniculatus_bairdii
ENSOMEG00000018860	tarbp2	92	60.938	ENSPMAG00000000105	tarbp2	99	60.938	Petromyzon_marinus
ENSOMEG00000018860	tarbp2	100	67.826	ENSPCIG00000006672	TARBP2	92	67.826	Phascolarctos_cinereus
ENSOMEG00000018860	tarbp2	100	91.594	ENSPFOG00000007586	tarbp2	100	91.594	Poecilia_formosa
ENSOMEG00000018860	tarbp2	100	91.304	ENSPLAG00000017659	tarbp2	100	91.304	Poecilia_latipinna
ENSOMEG00000018860	tarbp2	100	91.594	ENSPMEG00000007775	tarbp2	100	91.594	Poecilia_mexicana
ENSOMEG00000018860	tarbp2	100	91.594	ENSPREG00000007815	tarbp2	100	91.594	Poecilia_reticulata
ENSOMEG00000018860	tarbp2	97	65.875	ENSPPYG00000004583	TARBP2	97	66.864	Pongo_abelii
ENSOMEG00000018860	tarbp2	78	62.887	ENSPCAG00000005352	TARBP2	66	65.844	Procavia_capensis
ENSOMEG00000018860	tarbp2	100	63.881	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSOMEG00000018860	tarbp2	100	64.402	ENSPVAG00000012286	TARBP2	100	64.481	Pteropus_vampyrus
ENSOMEG00000018860	tarbp2	100	91.594	ENSPNYG00000014125	tarbp2	100	91.594	Pundamilia_nyererei
ENSOMEG00000018860	tarbp2	100	83.526	ENSPNAG00000011128	tarbp2	100	84.104	Pygocentrus_nattereri
ENSOMEG00000018860	tarbp2	100	64.110	ENSRNOG00000042355	Tarbp2	100	64.384	Rattus_norvegicus
ENSOMEG00000018860	tarbp2	100	65.027	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSOMEG00000018860	tarbp2	100	65.027	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSOMEG00000018860	tarbp2	100	64.754	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSOMEG00000018860	tarbp2	94	71.296	ENSSHAG00000007064	TARBP2	100	71.296	Sarcophilus_harrisii
ENSOMEG00000018860	tarbp2	100	79.330	ENSSFOG00015010784	tarbp2	100	79.609	Scleropages_formosus
ENSOMEG00000018860	tarbp2	100	91.453	ENSSMAG00000012769	tarbp2	100	91.453	Scophthalmus_maximus
ENSOMEG00000018860	tarbp2	100	93.333	ENSSDUG00000018818	tarbp2	100	93.333	Seriola_dumerili
ENSOMEG00000018860	tarbp2	100	92.754	ENSSLDG00000001835	tarbp2	100	92.754	Seriola_lalandi_dorsalis
ENSOMEG00000018860	tarbp2	76	66.667	ENSSARG00000001010	TARBP2	72	66.667	Sorex_araneus
ENSOMEG00000018860	tarbp2	63	89.474	ENSSPUG00000005895	TARBP2	94	52.252	Sphenodon_punctatus
ENSOMEG00000018860	tarbp2	100	93.043	ENSSPAG00000022797	tarbp2	100	93.043	Stegastes_partitus
ENSOMEG00000018860	tarbp2	100	65.027	ENSSSCG00000000276	TARBP2	100	66.859	Sus_scrofa
ENSOMEG00000018860	tarbp2	71	56.589	ENSTGUG00000017031	TARBP2	100	56.202	Taeniopygia_guttata
ENSOMEG00000018860	tarbp2	100	90.725	ENSTRUG00000014379	tarbp2	100	90.725	Takifugu_rubripes
ENSOMEG00000018860	tarbp2	100	90.725	ENSTNIG00000007065	tarbp2	100	90.725	Tetraodon_nigroviridis
ENSOMEG00000018860	tarbp2	100	65.301	ENSTTRG00000017177	TARBP2	100	65.027	Tursiops_truncatus
ENSOMEG00000018860	tarbp2	100	65.027	ENSUAMG00000009011	TARBP2	100	65.027	Ursus_americanus
ENSOMEG00000018860	tarbp2	100	64.481	ENSUMAG00000010461	TARBP2	100	64.481	Ursus_maritimus
ENSOMEG00000018860	tarbp2	100	65.027	ENSVVUG00000028150	TARBP2	100	66.957	Vulpes_vulpes
ENSOMEG00000018860	tarbp2	97	70.058	ENSXETG00000012644	tarbp2	97	70.058	Xenopus_tropicalis
ENSOMEG00000018860	tarbp2	100	91.014	ENSXMAG00000017836	tarbp2	100	91.014	Xiphophorus_maculatus