EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000018876 (Gene tree)
Gene ID: 112158007
Gene Symbol: apex1
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 11113 bases
Position: chrNVQA01000003.1:679092-690204
Accession: 112158007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000033087	Exo_endo_phos	PF03372.23	2.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000025876	-	4798	-	ENSOMEP00000033087	311 (aa)	XP_024146935	UPI000CF812C4

Gene Model

Click here to download ENSOMEG00000018876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000018876's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000018876	apex1	99	66.667	ENSG00000100823	APEX1	99	66.667	Homo_sapiens
ENSOMEG00000018876	apex1	100	88.424	ENSAPOG00000017002	apex1	100	88.424	Acanthochromis_polyacanthus
ENSOMEG00000018876	apex1	99	66.667	ENSAMEG00000005418	APEX1	99	66.667	Ailuropoda_melanoleuca
ENSOMEG00000018876	apex1	89	91.697	ENSACIG00000010653	apex1	95	91.786	Amphilophus_citrinellus
ENSOMEG00000018876	apex1	100	90.032	ENSAOCG00000009649	apex1	100	90.032	Amphiprion_ocellaris
ENSOMEG00000018876	apex1	100	90.354	ENSAPEG00000021453	apex1	100	90.354	Amphiprion_percula
ENSOMEG00000018876	apex1	99	91.613	ENSATEG00000002883	apex1	97	91.613	Anabas_testudineus
ENSOMEG00000018876	apex1	99	69.524	ENSACAG00000008099	APEX1	99	69.524	Anolis_carolinensis
ENSOMEG00000018876	apex1	99	67.296	ENSANAG00000030117	APEX1	99	67.296	Aotus_nancymaae
ENSOMEG00000018876	apex1	88	92.727	ENSACLG00000018441	apex1	100	90.675	Astatotilapia_calliptera
ENSOMEG00000018876	apex1	99	87.460	ENSAMXG00000034699	apex1	99	87.138	Astyanax_mexicanus
ENSOMEG00000018876	apex1	99	65.190	ENSBTAG00000002745	APEX1	88	69.534	Bos_taurus
ENSOMEG00000018876	apex1	91	43.007	WBGene00001372	exo-3	92	44.195	Caenorhabditis_elegans
ENSOMEG00000018876	apex1	99	67.296	ENSCJAG00000009726	APEX1	99	67.296	Callithrix_jacchus
ENSOMEG00000018876	apex1	99	66.981	ENSCAFG00000032033	APEX1	99	66.981	Canis_familiaris
ENSOMEG00000018876	apex1	99	66.981	ENSCAFG00020014377	-	99	66.981	Canis_lupus_dingo
ENSOMEG00000018876	apex1	53	60.465	ENSCAFG00020023002	-	94	60.465	Canis_lupus_dingo
ENSOMEG00000018876	apex1	99	65.190	ENSCHIG00000007298	-	88	69.534	Capra_hircus
ENSOMEG00000018876	apex1	89	55.396	ENSCHIG00000014537	-	89	55.396	Capra_hircus
ENSOMEG00000018876	apex1	99	65.723	ENSTSYG00000034813	APEX1	99	65.409	Carlito_syrichta
ENSOMEG00000018876	apex1	92	63.448	ENSCAPG00000016235	APEX1	91	71.186	Cavia_aperea
ENSOMEG00000018876	apex1	99	67.610	ENSCPOG00000030909	APEX1	99	67.296	Cavia_porcellus
ENSOMEG00000018876	apex1	99	57.595	ENSCCAG00000031931	-	87	60.932	Cebus_capucinus
ENSOMEG00000018876	apex1	99	67.296	ENSCCAG00000033056	-	99	67.296	Cebus_capucinus
ENSOMEG00000018876	apex1	99	66.352	ENSCATG00000015580	APEX1	99	66.352	Cercocebus_atys
ENSOMEG00000018876	apex1	99	67.296	ENSCLAG00000001002	APEX1	99	66.352	Chinchilla_lanigera
ENSOMEG00000018876	apex1	99	66.667	ENSCSAG00000016685	-	99	66.667	Chlorocebus_sabaeus
ENSOMEG00000018876	apex1	99	66.667	ENSCSAG00000016670	-	99	66.667	Chlorocebus_sabaeus
ENSOMEG00000018876	apex1	99	70.570	ENSCPBG00000009567	APEX1	99	70.570	Chrysemys_picta_bellii
ENSOMEG00000018876	apex1	100	54.019	ENSCING00000008137	-	85	59.551	Ciona_intestinalis
ENSOMEG00000018876	apex1	99	48.571	ENSCSAVG00000007144	-	100	53.876	Ciona_savignyi
ENSOMEG00000018876	apex1	99	66.667	ENSCANG00000030726	APEX1	99	66.667	Colobus_angolensis_palliatus
ENSOMEG00000018876	apex1	99	65.409	ENSCGRG00001017046	Apex1	88	69.892	Cricetulus_griseus_chok1gshd
ENSOMEG00000018876	apex1	99	65.409	ENSCGRG00000008984	Apex1	88	69.892	Cricetulus_griseus_crigri
ENSOMEG00000018876	apex1	100	86.174	ENSCSEG00000017499	apex1	99	86.174	Cynoglossus_semilaevis
ENSOMEG00000018876	apex1	100	90.997	ENSCVAG00000022075	apex1	100	90.997	Cyprinodon_variegatus
ENSOMEG00000018876	apex1	99	86.452	ENSDARG00000045843	apex1	99	86.452	Danio_rerio
ENSOMEG00000018876	apex1	99	63.208	ENSDNOG00000042234	APEX1	94	63.208	Dasypus_novemcinctus
ENSOMEG00000018876	apex1	99	66.352	ENSDORG00000001616	Apex1	99	66.038	Dipodomys_ordii
ENSOMEG00000018876	apex1	99	66.981	ENSETEG00000004855	-	99	66.667	Echinops_telfairi
ENSOMEG00000018876	apex1	76	60.084	ENSEBUG00000000622	-	92	60.084	Eptatretus_burgeri
ENSOMEG00000018876	apex1	99	67.296	ENSEASG00005017489	APEX1	73	66.981	Equus_asinus_asinus
ENSOMEG00000018876	apex1	99	67.296	ENSECAG00000022325	APEX1	81	66.981	Equus_caballus
ENSOMEG00000018876	apex1	86	69.888	ENSEEUG00000012569	APEX1	93	69.888	Erinaceus_europaeus
ENSOMEG00000018876	apex1	99	83.923	ENSELUG00000021706	apex1	99	85.852	Esox_lucius
ENSOMEG00000018876	apex1	99	67.610	ENSFCAG00000030869	APEX1	99	67.296	Felis_catus
ENSOMEG00000018876	apex1	99	68.239	ENSFDAG00000006120	APEX1	99	67.296	Fukomys_damarensis
ENSOMEG00000018876	apex1	100	91.640	ENSFHEG00000009031	apex1	83	91.640	Fundulus_heteroclitus
ENSOMEG00000018876	apex1	100	78.135	ENSGMOG00000007943	apex1	99	78.135	Gadus_morhua
ENSOMEG00000018876	apex1	100	90.997	ENSGAFG00000005311	apex1	100	90.997	Gambusia_affinis
ENSOMEG00000018876	apex1	100	90.675	ENSGACG00000019497	apex1	99	90.977	Gasterosteus_aculeatus
ENSOMEG00000018876	apex1	99	70.570	ENSGAGG00000014999	APEX1	99	70.570	Gopherus_agassizii
ENSOMEG00000018876	apex1	99	66.352	ENSGGOG00000002128	APEX1	99	66.352	Gorilla_gorilla
ENSOMEG00000018876	apex1	100	90.032	ENSHBUG00000005894	apex1	100	90.032	Haplochromis_burtoni
ENSOMEG00000018876	apex1	99	68.239	ENSHGLG00000002848	APEX1	99	67.296	Heterocephalus_glaber_female
ENSOMEG00000018876	apex1	99	68.239	ENSHGLG00100017878	APEX1	99	67.296	Heterocephalus_glaber_male
ENSOMEG00000018876	apex1	100	90.064	ENSHCOG00000009961	apex1	100	89.068	Hippocampus_comes
ENSOMEG00000018876	apex1	99	83.601	ENSIPUG00000005799	apex1	99	83.548	Ictalurus_punctatus
ENSOMEG00000018876	apex1	99	66.981	ENSSTOG00000010096	APEX1	99	66.981	Ictidomys_tridecemlineatus
ENSOMEG00000018876	apex1	99	66.038	ENSJJAG00000012067	-	99	66.038	Jaculus_jaculus
ENSOMEG00000018876	apex1	99	59.748	ENSJJAG00000003660	-	99	59.748	Jaculus_jaculus
ENSOMEG00000018876	apex1	89	62.007	ENSJJAG00000020465	-	90	62.007	Jaculus_jaculus
ENSOMEG00000018876	apex1	100	88.746	ENSKMAG00000021171	apex1	100	88.746	Kryptolebias_marmoratus
ENSOMEG00000018876	apex1	100	90.032	ENSLBEG00000010248	apex1	100	90.032	Labrus_bergylta
ENSOMEG00000018876	apex1	99	75.000	ENSLACG00000008617	APEX1	89	79.286	Latimeria_chalumnae
ENSOMEG00000018876	apex1	99	78.981	ENSLOCG00000015516	apex1	99	78.025	Lepisosteus_oculatus
ENSOMEG00000018876	apex1	99	66.456	ENSLAFG00000021872	APEX1	88	71.326	Loxodonta_africana
ENSOMEG00000018876	apex1	99	66.352	ENSMFAG00000002565	APEX1	99	66.352	Macaca_fascicularis
ENSOMEG00000018876	apex1	99	66.352	ENSMMUG00000048039	APEX1	99	66.352	Macaca_mulatta
ENSOMEG00000018876	apex1	99	66.352	ENSMNEG00000036944	APEX1	99	66.352	Macaca_nemestrina
ENSOMEG00000018876	apex1	99	66.352	ENSMLEG00000042125	APEX1	99	66.352	Mandrillus_leucophaeus
ENSOMEG00000018876	apex1	100	91.640	ENSMAMG00000023526	apex1	100	91.640	Mastacembelus_armatus
ENSOMEG00000018876	apex1	88	92.727	ENSMZEG00005014187	apex1	100	90.675	Maylandia_zebra
ENSOMEG00000018876	apex1	99	65.615	ENSMAUG00000013994	Apex1	88	69.534	Mesocricetus_auratus
ENSOMEG00000018876	apex1	99	66.038	ENSMICG00000043554	APEX1	99	66.038	Microcebus_murinus
ENSOMEG00000018876	apex1	99	66.667	ENSMOCG00000013721	Apex1	99	66.667	Microtus_ochrogaster
ENSOMEG00000018876	apex1	100	86.218	ENSMMOG00000010031	apex1	97	86.218	Mola_mola
ENSOMEG00000018876	apex1	89	69.892	ENSMODG00000007125	APEX1	87	69.892	Monodelphis_domestica
ENSOMEG00000018876	apex1	90	85.000	ENSMALG00000011699	apex1	75	85.000	Monopterus_albus
ENSOMEG00000018876	apex1	99	67.516	MGP_CAROLIEiJ_G0019209	Apex1	99	67.516	Mus_caroli
ENSOMEG00000018876	apex1	99	67.302	ENSMUSG00000035960	Apex1	99	67.302	Mus_musculus
ENSOMEG00000018876	apex1	99	66.984	MGP_PahariEiJ_G0030232	Apex1	99	66.984	Mus_pahari
ENSOMEG00000018876	apex1	99	67.302	MGP_SPRETEiJ_G0020101	Apex1	99	67.302	Mus_spretus
ENSOMEG00000018876	apex1	99	65.938	ENSMLUG00000028957	APEX1	99	65.312	Myotis_lucifugus
ENSOMEG00000018876	apex1	87	53.047	ENSNGAG00000021748	-	72	56.667	Nannospalax_galili
ENSOMEG00000018876	apex1	99	66.667	ENSNGAG00000002725	-	99	66.038	Nannospalax_galili
ENSOMEG00000018876	apex1	95	90.847	ENSNBRG00000005334	apex1	91	90.675	Neolamprologus_brichardi
ENSOMEG00000018876	apex1	99	66.352	ENSNLEG00000010839	APEX1	99	66.352	Nomascus_leucogenys
ENSOMEG00000018876	apex1	99	65.924	ENSMEUG00000014519	APEX1	99	65.924	Notamacropus_eugenii
ENSOMEG00000018876	apex1	99	65.615	ENSOPRG00000014029	APEX1	99	65.615	Ochotona_princeps
ENSOMEG00000018876	apex1	99	67.296	ENSODEG00000001703	-	99	66.981	Octodon_degus
ENSOMEG00000018876	apex1	97	52.980	ENSODEG00000004777	-	83	57.708	Octodon_degus
ENSOMEG00000018876	apex1	99	52.469	ENSODEG00000006583	-	99	52.160	Octodon_degus
ENSOMEG00000018876	apex1	95	90.847	ENSONIG00000012089	apex1	100	90.675	Oreochromis_niloticus
ENSOMEG00000018876	apex1	88	69.455	ENSOANG00000008836	APEX1	68	69.455	Ornithorhynchus_anatinus
ENSOMEG00000018876	apex1	99	66.352	ENSOCUG00000005022	APEX1	99	66.352	Oryctolagus_cuniculus
ENSOMEG00000018876	apex1	100	96.785	ENSORLG00000012378	apex1	100	96.785	Oryzias_latipes
ENSOMEG00000018876	apex1	100	96.785	ENSORLG00020021371	apex1	100	96.785	Oryzias_latipes_hni
ENSOMEG00000018876	apex1	100	96.785	ENSORLG00015020089	apex1	100	96.785	Oryzias_latipes_hsok
ENSOMEG00000018876	apex1	99	67.610	ENSOGAG00000013335	-	99	67.610	Otolemur_garnettii
ENSOMEG00000018876	apex1	89	63.441	ENSOGAG00000029355	-	89	63.441	Otolemur_garnettii
ENSOMEG00000018876	apex1	96	62.092	ENSOARG00000001876	-	87	66.171	Ovis_aries
ENSOMEG00000018876	apex1	99	65.506	ENSOARG00000019740	-	88	69.892	Ovis_aries
ENSOMEG00000018876	apex1	97	56.209	ENSOARG00000014424	-	89	58.423	Ovis_aries
ENSOMEG00000018876	apex1	99	66.667	ENSPPAG00000038760	APEX1	99	66.667	Pan_paniscus
ENSOMEG00000018876	apex1	99	67.296	ENSPPRG00000011794	APEX1	99	67.296	Panthera_pardus
ENSOMEG00000018876	apex1	99	67.610	ENSPTIG00000014829	APEX1	99	67.296	Panthera_tigris_altaica
ENSOMEG00000018876	apex1	99	66.667	ENSPTRG00000006093	APEX1	99	66.667	Pan_troglodytes
ENSOMEG00000018876	apex1	99	66.352	ENSPANG00000022757	APEX1	99	66.352	Papio_anubis
ENSOMEG00000018876	apex1	89	87.319	ENSPKIG00000003504	apex1	99	85.256	Paramormyrops_kingsleyae
ENSOMEG00000018876	apex1	77	84.937	ENSPMGG00000016596	apex1	72	84.937	Periophthalmus_magnuspinnatus
ENSOMEG00000018876	apex1	99	66.349	ENSPEMG00000019097	Apex1	99	66.349	Peromyscus_maniculatus_bairdii
ENSOMEG00000018876	apex1	93	72.165	ENSPMAG00000007275	-	95	73.477	Petromyzon_marinus
ENSOMEG00000018876	apex1	89	68.817	ENSPCIG00000023274	APEX1	87	68.817	Phascolarctos_cinereus
ENSOMEG00000018876	apex1	100	90.997	ENSPFOG00000004178	apex1	100	90.997	Poecilia_formosa
ENSOMEG00000018876	apex1	100	90.675	ENSPLAG00000012779	apex1	100	90.675	Poecilia_latipinna
ENSOMEG00000018876	apex1	100	90.997	ENSPMEG00000019623	apex1	100	90.997	Poecilia_mexicana
ENSOMEG00000018876	apex1	100	89.389	ENSPREG00000014298	apex1	99	89.389	Poecilia_reticulata
ENSOMEG00000018876	apex1	99	66.352	ENSPPYG00000005565	APEX1	99	66.352	Pongo_abelii
ENSOMEG00000018876	apex1	99	65.409	ENSPCAG00000010376	APEX1	99	65.409	Procavia_capensis
ENSOMEG00000018876	apex1	99	66.352	ENSPCOG00000021564	APEX1	99	66.352	Propithecus_coquereli
ENSOMEG00000018876	apex1	99	66.250	ENSPVAG00000010736	APEX1	99	65.723	Pteropus_vampyrus
ENSOMEG00000018876	apex1	88	93.091	ENSPNYG00000023940	apex1	100	90.997	Pundamilia_nyererei
ENSOMEG00000018876	apex1	92	87.108	ENSPNAG00000020897	apex1	96	87.063	Pygocentrus_nattereri
ENSOMEG00000018876	apex1	99	66.667	ENSRNOG00000009663	Apex1	99	66.667	Rattus_norvegicus
ENSOMEG00000018876	apex1	99	66.667	ENSRBIG00000038325	APEX1	98	66.667	Rhinopithecus_bieti
ENSOMEG00000018876	apex1	99	67.296	ENSSBOG00000018921	-	99	67.296	Saimiri_boliviensis_boliviensis
ENSOMEG00000018876	apex1	99	59.164	ENSSBOG00000031372	-	91	62.007	Saimiri_boliviensis_boliviensis
ENSOMEG00000018876	apex1	99	62.963	ENSSHAG00000013524	APEX1	87	68.440	Sarcophilus_harrisii
ENSOMEG00000018876	apex1	99	81.029	ENSSFOG00015001948	apex1	99	83.601	Scleropages_formosus
ENSOMEG00000018876	apex1	100	88.889	ENSSMAG00000013348	apex1	100	89.524	Scophthalmus_maximus
ENSOMEG00000018876	apex1	100	91.961	ENSSDUG00000016377	apex1	99	91.961	Seriola_dumerili
ENSOMEG00000018876	apex1	100	91.961	ENSSLDG00000023005	apex1	100	91.961	Seriola_lalandi_dorsalis
ENSOMEG00000018876	apex1	90	73.571	ENSSPUG00000000531	APEX1	94	73.477	Sphenodon_punctatus
ENSOMEG00000018876	apex1	100	88.746	ENSSPAG00000000458	apex1	100	88.746	Stegastes_partitus
ENSOMEG00000018876	apex1	99	67.296	ENSSSCG00000040060	-	99	66.667	Sus_scrofa
ENSOMEG00000018876	apex1	95	40.594	ENSSSCG00000039705	-	89	42.960	Sus_scrofa
ENSOMEG00000018876	apex1	76	59.574	ENSTGUG00000014378	APEX1	100	59.574	Taeniopygia_guttata
ENSOMEG00000018876	apex1	100	84.984	ENSTRUG00000004268	apex1	95	85.942	Takifugu_rubripes
ENSOMEG00000018876	apex1	100	87.781	ENSTNIG00000005778	apex1	100	87.781	Tetraodon_nigroviridis
ENSOMEG00000018876	apex1	99	63.522	ENSTBEG00000006405	APEX1	99	63.522	Tupaia_belangeri
ENSOMEG00000018876	apex1	76	69.362	ENSTTRG00000007860	APEX1	100	69.362	Tursiops_truncatus
ENSOMEG00000018876	apex1	99	66.667	ENSUAMG00000010457	APEX1	99	66.352	Ursus_americanus
ENSOMEG00000018876	apex1	99	66.667	ENSUMAG00000009178	APEX1	99	66.352	Ursus_maritimus
ENSOMEG00000018876	apex1	76	64.681	ENSVPAG00000005083	APEX1	100	64.681	Vicugna_pacos
ENSOMEG00000018876	apex1	99	66.667	ENSVVUG00000009010	APEX1	99	66.667	Vulpes_vulpes
ENSOMEG00000018876	apex1	99	70.476	ENSXETG00000024773	apex1	99	69.841	Xenopus_tropicalis
ENSOMEG00000018876	apex1	100	90.997	ENSXCOG00000015233	apex1	99	90.997	Xiphophorus_couchianus
ENSOMEG00000018876	apex1	100	90.997	ENSXMAG00000006195	apex1	100	90.997	Xiphophorus_maculatus