EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000018897 (Gene tree)
Gene ID: 112144726
Gene Symbol: pusl1
Alias: -
Full Name: pseudouridine synthase like 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 26400 bases
Position: chrNVQA01000009.1:32320602-32347001
Accession: 112144726
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000033092	PseudoU_synth_1	PF01416.20	9.5e-33	1	2
ENSOMEP00000033092	PseudoU_synth_1	PF01416.20	9.5e-33	2	2
ENSOMEP00000017218	PseudoU_synth_1	PF01416.20	3.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000025897	-	5491	-	ENSOMEP00000017218	359 (aa)	-	-
ENSOMET00000025890	-	5541	-	ENSOMEP00000033092	290 (aa)	XP_024125210	UPI000CF83E3D

Gene Model

Click here to download ENSOMEG00000018897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000018897's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000018897	pusl1	94	50.362	ENSG00000169972	PUSL1	97	47.154	Homo_sapiens
ENSOMEG00000018897	pusl1	98	73.498	ENSAPOG00000016290	pusl1	95	73.498	Acanthochromis_polyacanthus
ENSOMEG00000018897	pusl1	94	47.826	ENSAMEG00000013752	PUSL1	90	47.826	Ailuropoda_melanoleuca
ENSOMEG00000018897	pusl1	94	72.263	ENSACIG00000015240	pusl1	100	72.263	Amphilophus_citrinellus
ENSOMEG00000018897	pusl1	99	70.035	ENSAOCG00000019419	pusl1	86	70.035	Amphiprion_ocellaris
ENSOMEG00000018897	pusl1	98	71.479	ENSAPEG00000005452	pusl1	95	71.378	Amphiprion_percula
ENSOMEG00000018897	pusl1	98	72.632	ENSATEG00000024154	pusl1	95	72.632	Anabas_testudineus
ENSOMEG00000018897	pusl1	95	50.542	ENSAPLG00000004946	PUSL1	92	50.542	Anas_platyrhynchos
ENSOMEG00000018897	pusl1	89	52.124	ENSACAG00000014111	PUSL1	98	52.124	Anolis_carolinensis
ENSOMEG00000018897	pusl1	96	49.286	ENSANAG00000037456	PUSL1	91	49.286	Aotus_nancymaae
ENSOMEG00000018897	pusl1	98	74.035	ENSACLG00000008675	pusl1	95	74.035	Astatotilapia_calliptera
ENSOMEG00000018897	pusl1	99	60.279	ENSAMXG00000044007	pusl1	97	60.279	Astyanax_mexicanus
ENSOMEG00000018897	pusl1	94	51.079	ENSBTAG00000007619	PUSL1	94	51.079	Bos_taurus
ENSOMEG00000018897	pusl1	96	48.929	ENSCJAG00000010972	PUSL1	91	48.929	Callithrix_jacchus
ENSOMEG00000018897	pusl1	94	46.739	ENSCAFG00000019291	PUSL1	90	46.739	Canis_familiaris
ENSOMEG00000018897	pusl1	94	47.826	ENSCAFG00020011568	PUSL1	89	47.826	Canis_lupus_dingo
ENSOMEG00000018897	pusl1	94	50.719	ENSCHIG00000012615	PUSL1	95	50.719	Capra_hircus
ENSOMEG00000018897	pusl1	94	47.273	ENSCPOG00000005149	PUSL1	89	47.273	Cavia_porcellus
ENSOMEG00000018897	pusl1	96	48.929	ENSCCAG00000027475	PUSL1	91	48.929	Cebus_capucinus
ENSOMEG00000018897	pusl1	94	50.000	ENSCATG00000018260	PUSL1	90	50.000	Cercocebus_atys
ENSOMEG00000018897	pusl1	95	47.842	ENSCLAG00000005232	PUSL1	90	47.842	Chinchilla_lanigera
ENSOMEG00000018897	pusl1	94	50.360	ENSCSAG00000000680	PUSL1	90	50.360	Chlorocebus_sabaeus
ENSOMEG00000018897	pusl1	96	54.480	ENSCPBG00000022621	PUSL1	95	54.480	Chrysemys_picta_bellii
ENSOMEG00000018897	pusl1	94	50.000	ENSCANG00000034373	PUSL1	90	50.000	Colobus_angolensis_palliatus
ENSOMEG00000018897	pusl1	95	48.387	ENSCGRG00001012429	Pusl1	95	48.387	Cricetulus_griseus_chok1gshd
ENSOMEG00000018897	pusl1	95	48.029	ENSCGRG00000006466	Pusl1	95	48.029	Cricetulus_griseus_crigri
ENSOMEG00000018897	pusl1	99	69.686	ENSCSEG00000005159	pusl1	96	69.686	Cynoglossus_semilaevis
ENSOMEG00000018897	pusl1	82	60.338	ENSCVAG00000012923	pusl1	91	60.338	Cyprinodon_variegatus
ENSOMEG00000018897	pusl1	97	64.643	ENSDARG00000074565	pusl1	97	64.621	Danio_rerio
ENSOMEG00000018897	pusl1	96	32.459	FBgn0083976	CG34140	99	32.459	Drosophila_melanogaster
ENSOMEG00000018897	pusl1	94	49.455	ENSECAG00000006248	PUSL1	89	49.455	Equus_caballus
ENSOMEG00000018897	pusl1	94	46.043	ENSEEUG00000000837	PUSL1	93	46.043	Erinaceus_europaeus
ENSOMEG00000018897	pusl1	97	66.548	ENSELUG00000015945	pusl1	96	66.548	Esox_lucius
ENSOMEG00000018897	pusl1	94	48.913	ENSFCAG00000007617	PUSL1	91	48.913	Felis_catus
ENSOMEG00000018897	pusl1	100	75.258	ENSFHEG00000006370	pusl1	97	75.258	Fundulus_heteroclitus
ENSOMEG00000018897	pusl1	97	69.149	ENSGMOG00000019388	pusl1	100	69.149	Gadus_morhua
ENSOMEG00000018897	pusl1	96	50.896	ENSGALG00000001714	PUSL1	96	50.896	Gallus_gallus
ENSOMEG00000018897	pusl1	98	69.825	ENSGAFG00000007546	pusl1	97	69.825	Gambusia_affinis
ENSOMEG00000018897	pusl1	100	70.447	ENSGACG00000007848	pusl1	96	70.447	Gasterosteus_aculeatus
ENSOMEG00000018897	pusl1	96	53.763	ENSGAGG00000004730	PUSL1	95	53.763	Gopherus_agassizii
ENSOMEG00000018897	pusl1	82	50.207	ENSGGOG00000005364	PUSL1	93	50.207	Gorilla_gorilla
ENSOMEG00000018897	pusl1	98	74.386	ENSHBUG00000001264	pusl1	95	74.386	Haplochromis_burtoni
ENSOMEG00000018897	pusl1	96	46.619	ENSHGLG00000017570	PUSL1	91	46.619	Heterocephalus_glaber_female
ENSOMEG00000018897	pusl1	86	47.012	ENSHGLG00100007641	PUSL1	82	47.390	Heterocephalus_glaber_male
ENSOMEG00000018897	pusl1	97	70.213	ENSHCOG00000010077	pusl1	100	71.377	Hippocampus_comes
ENSOMEG00000018897	pusl1	96	64.029	ENSIPUG00000023921	pusl1	95	64.029	Ictalurus_punctatus
ENSOMEG00000018897	pusl1	94	49.638	ENSSTOG00000001783	PUSL1	85	49.638	Ictidomys_tridecemlineatus
ENSOMEG00000018897	pusl1	95	48.561	ENSJJAG00000020471	Pusl1	93	48.561	Jaculus_jaculus
ENSOMEG00000018897	pusl1	92	68.797	ENSKMAG00000005154	pusl1	90	68.797	Kryptolebias_marmoratus
ENSOMEG00000018897	pusl1	100	71.379	ENSLBEG00000013469	pusl1	99	71.379	Labrus_bergylta
ENSOMEG00000018897	pusl1	66	55.440	ENSLACG00000018795	PUSL1	95	55.440	Latimeria_chalumnae
ENSOMEG00000018897	pusl1	98	57.343	ENSLOCG00000002210	pusl1	97	57.343	Lepisosteus_oculatus
ENSOMEG00000018897	pusl1	90	49.618	ENSLAFG00000013685	PUSL1	97	49.618	Loxodonta_africana
ENSOMEG00000018897	pusl1	94	50.000	ENSMFAG00000046288	PUSL1	90	50.000	Macaca_fascicularis
ENSOMEG00000018897	pusl1	94	43.841	ENSMMUG00000016279	PUSL1	89	43.841	Macaca_mulatta
ENSOMEG00000018897	pusl1	94	50.362	ENSMNEG00000037989	PUSL1	90	50.362	Macaca_nemestrina
ENSOMEG00000018897	pusl1	100	69.655	ENSMAMG00000016538	pusl1	96	69.655	Mastacembelus_armatus
ENSOMEG00000018897	pusl1	98	74.035	ENSMZEG00005026990	pusl1	95	74.035	Maylandia_zebra
ENSOMEG00000018897	pusl1	96	50.179	ENSMGAG00000003037	PUSL1	95	50.179	Meleagris_gallopavo
ENSOMEG00000018897	pusl1	95	48.029	ENSMAUG00000019924	Pusl1	95	48.029	Mesocricetus_auratus
ENSOMEG00000018897	pusl1	94	50.362	ENSMICG00000014171	PUSL1	93	50.362	Microcebus_murinus
ENSOMEG00000018897	pusl1	95	49.821	ENSMOCG00000005602	Pusl1	95	49.821	Microtus_ochrogaster
ENSOMEG00000018897	pusl1	96	70.357	ENSMMOG00000003269	pusl1	100	70.357	Mola_mola
ENSOMEG00000018897	pusl1	100	70.103	ENSMALG00000021686	pusl1	96	70.103	Monopterus_albus
ENSOMEG00000018897	pusl1	94	48.188	MGP_CAROLIEiJ_G0026911	Pusl1	94	48.188	Mus_caroli
ENSOMEG00000018897	pusl1	94	48.188	ENSMUSG00000051557	Pusl1	94	48.188	Mus_musculus
ENSOMEG00000018897	pusl1	94	48.913	MGP_PahariEiJ_G0029260	Pusl1	94	48.913	Mus_pahari
ENSOMEG00000018897	pusl1	94	48.551	MGP_SPRETEiJ_G0027906	Pusl1	94	48.551	Mus_spretus
ENSOMEG00000018897	pusl1	95	48.736	ENSMPUG00000014313	PUSL1	90	48.736	Mustela_putorius_furo
ENSOMEG00000018897	pusl1	95	50.000	ENSNGAG00000004647	Pusl1	82	50.000	Nannospalax_galili
ENSOMEG00000018897	pusl1	84	70.325	ENSNBRG00000014762	pusl1	89	70.325	Neolamprologus_brichardi
ENSOMEG00000018897	pusl1	89	50.385	ENSNLEG00000000051	PUSL1	93	50.385	Nomascus_leucogenys
ENSOMEG00000018897	pusl1	94	39.927	ENSMEUG00000005176	-	98	39.927	Notamacropus_eugenii
ENSOMEG00000018897	pusl1	94	51.264	ENSMEUG00000011649	-	96	51.264	Notamacropus_eugenii
ENSOMEG00000018897	pusl1	95	48.214	ENSODEG00000008247	PUSL1	89	48.214	Octodon_degus
ENSOMEG00000018897	pusl1	98	74.035	ENSONIG00000019361	pusl1	94	74.035	Oreochromis_niloticus
ENSOMEG00000018897	pusl1	99	87.456	ENSORLG00000016228	pusl1	97	87.456	Oryzias_latipes
ENSOMEG00000018897	pusl1	99	87.456	ENSORLG00020013710	pusl1	97	87.456	Oryzias_latipes_hni
ENSOMEG00000018897	pusl1	97	87.544	ENSORLG00015008715	pusl1	99	87.544	Oryzias_latipes_hsok
ENSOMEG00000018897	pusl1	94	49.281	ENSOGAG00000031692	PUSL1	95	49.281	Otolemur_garnettii
ENSOMEG00000018897	pusl1	90	50.758	ENSOARG00000004905	PUSL1	97	50.758	Ovis_aries
ENSOMEG00000018897	pusl1	94	50.725	ENSPPAG00000029283	PUSL1	90	50.725	Pan_paniscus
ENSOMEG00000018897	pusl1	94	48.551	ENSPPRG00000023329	PUSL1	91	48.551	Panthera_pardus
ENSOMEG00000018897	pusl1	85	49.194	ENSPTIG00000018532	PUSL1	91	49.194	Panthera_tigris_altaica
ENSOMEG00000018897	pusl1	94	50.362	ENSPTRG00000000021	PUSL1	90	50.362	Pan_troglodytes
ENSOMEG00000018897	pusl1	98	48.789	ENSPANG00000000591	PUSL1	94	48.789	Papio_anubis
ENSOMEG00000018897	pusl1	97	63.251	ENSPKIG00000002447	pusl1	97	63.251	Paramormyrops_kingsleyae
ENSOMEG00000018897	pusl1	87	55.556	ENSPSIG00000002781	PUSL1	93	55.556	Pelodiscus_sinensis
ENSOMEG00000018897	pusl1	95	66.304	ENSPMGG00000011051	pusl1	99	66.304	Periophthalmus_magnuspinnatus
ENSOMEG00000018897	pusl1	95	49.462	ENSPEMG00000013541	Pusl1	95	49.462	Peromyscus_maniculatus_bairdii
ENSOMEG00000018897	pusl1	96	50.534	ENSPCIG00000007816	-	64	50.355	Phascolarctos_cinereus
ENSOMEG00000018897	pusl1	98	69.965	ENSPFOG00000015448	pusl1	94	69.965	Poecilia_formosa
ENSOMEG00000018897	pusl1	99	70.035	ENSPLAG00000004348	pusl1	97	70.035	Poecilia_latipinna
ENSOMEG00000018897	pusl1	99	70.035	ENSPMEG00000000931	pusl1	97	70.035	Poecilia_mexicana
ENSOMEG00000018897	pusl1	99	70.035	ENSPREG00000002324	pusl1	97	70.035	Poecilia_reticulata
ENSOMEG00000018897	pusl1	83	48.560	ENSPPYG00000002014	PUSL1	86	48.560	Pongo_abelii
ENSOMEG00000018897	pusl1	64	48.148	ENSPCAG00000002272	PUSL1	77	48.148	Procavia_capensis
ENSOMEG00000018897	pusl1	69	52.778	ENSPVAG00000001016	PUSL1	66	52.778	Pteropus_vampyrus
ENSOMEG00000018897	pusl1	83	75.833	ENSPNYG00000006588	pusl1	100	75.833	Pundamilia_nyererei
ENSOMEG00000018897	pusl1	98	62.544	ENSPNAG00000024441	pusl1	98	62.544	Pygocentrus_nattereri
ENSOMEG00000018897	pusl1	94	49.819	ENSRNOG00000022354	Pusl1	94	49.819	Rattus_norvegicus
ENSOMEG00000018897	pusl1	94	49.638	ENSRBIG00000036842	PUSL1	90	49.638	Rhinopithecus_bieti
ENSOMEG00000018897	pusl1	94	49.638	ENSRROG00000030704	PUSL1	90	49.638	Rhinopithecus_roxellana
ENSOMEG00000018897	pusl1	86	48.810	ENSSBOG00000032249	PUSL1	90	48.810	Saimiri_boliviensis_boliviensis
ENSOMEG00000018897	pusl1	52	50.000	ENSSHAG00000004840	-	84	46.951	Sarcophilus_harrisii
ENSOMEG00000018897	pusl1	95	62.816	ENSSFOG00015008281	pusl1	91	62.816	Scleropages_formosus
ENSOMEG00000018897	pusl1	99	72.474	ENSSMAG00000007187	pusl1	95	72.474	Scophthalmus_maximus
ENSOMEG00000018897	pusl1	99	73.519	ENSSDUG00000000287	pusl1	89	73.519	Seriola_dumerili
ENSOMEG00000018897	pusl1	99	73.868	ENSSLDG00000009605	pusl1	92	73.868	Seriola_lalandi_dorsalis
ENSOMEG00000018897	pusl1	57	51.220	ENSSARG00000005323	-	86	51.220	Sorex_araneus
ENSOMEG00000018897	pusl1	94	66.058	ENSSPAG00000002528	pusl1	100	66.058	Stegastes_partitus
ENSOMEG00000018897	pusl1	98	48.264	ENSSSCG00000003338	PUSL1	92	48.264	Sus_scrofa
ENSOMEG00000018897	pusl1	94	51.095	ENSTGUG00000003214	PUSL1	96	51.273	Taeniopygia_guttata
ENSOMEG00000018897	pusl1	98	71.731	ENSTRUG00000010102	pusl1	95	71.731	Takifugu_rubripes
ENSOMEG00000018897	pusl1	63	63.736	ENSTNIG00000005789	pusl1	82	63.736	Tetraodon_nigroviridis
ENSOMEG00000018897	pusl1	61	44.944	ENSTBEG00000005001	PUSL1	74	44.944	Tupaia_belangeri
ENSOMEG00000018897	pusl1	94	43.011	ENSTTRG00000017030	PUSL1	90	43.011	Tursiops_truncatus
ENSOMEG00000018897	pusl1	83	47.934	ENSUAMG00000012801	PUSL1	79	47.934	Ursus_americanus
ENSOMEG00000018897	pusl1	83	48.347	ENSUMAG00000002084	PUSL1	79	48.347	Ursus_maritimus
ENSOMEG00000018897	pusl1	98	46.503	ENSVVUG00000004320	PUSL1	90	41.905	Vulpes_vulpes
ENSOMEG00000018897	pusl1	79	53.043	ENSXETG00000011145	pusl1	100	53.043	Xenopus_tropicalis
ENSOMEG00000018897	pusl1	97	66.548	ENSXCOG00000017748	pusl1	99	66.548	Xiphophorus_couchianus
ENSOMEG00000018897	pusl1	99	71.777	ENSXMAG00000018846	pusl1	97	71.777	Xiphophorus_maculatus