EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000019072 (Gene tree)
Gene ID: 112138623
Gene Symbol: wdhd1
Alias: -
Full Name: WD repeat and HMG-box DNA binding protein 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 44245 bases
Position: chrNVQA01001380.1:470901-515145
Accession: ZDB-GENE-030131-1665
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000033155	eIF2A	PF08662.11	4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000034764	-	861	-	ENSOMEP00000033155	286 (aa)	-	-
ENSOMET00000034786	-	4548	-	ENSOMEP00000033191	999 (aa)	-	-
ENSOMET00000034773	-	3153	-	ENSOMEP00000017312	1050 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000019072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000019072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000019072	wdhd1	67	72.917	ENSAMXG00000043712	wdhd1	69	72.917	Astyanax_mexicanus
ENSOMEG00000019072	wdhd1	67	81.250	ENSCVAG00000006106	wdhd1	60	81.250	Cyprinodon_variegatus
ENSOMEG00000019072	wdhd1	65	70.968	ENSDARG00000015998	wdhd1	63	68.229	Danio_rerio
ENSOMEG00000019072	wdhd1	67	62.500	ENSEASG00005003136	-	70	62.500	Equus_asinus_asinus
ENSOMEG00000019072	wdhd1	67	81.152	ENSFHEG00000009177	-	61	81.152	Fundulus_heteroclitus
ENSOMEG00000019072	wdhd1	66	84.211	ENSHBUG00000015846	-	62	84.211	Haplochromis_burtoni
ENSOMEG00000019072	wdhd1	65	76.757	ENSMZEG00005025682	-	58	77.368	Maylandia_zebra
ENSOMEG00000019072	wdhd1	55	65.823	ENSOANG00000015129	-	59	65.823	Ornithorhynchus_anatinus
ENSOMEG00000019072	wdhd1	66	66.321	ENSPLAG00000009199	wdhd1	62	66.321	Poecilia_latipinna
ENSOMEG00000019072	wdhd1	67	83.854	ENSPNYG00000019115	wdhd1	61	83.854	Pundamilia_nyererei
ENSOMEG00000019072	wdhd1	66	82.632	ENSSLDG00000021689	wdhd1	59	82.632	Seriola_lalandi_dorsalis
ENSOMEG00000019072	wdhd1	68	61.340	ENSSPUG00000004721	-	61	61.340	Sphenodon_punctatus
ENSOMEG00000019072	wdhd1	65	81.081	ENSTRUG00000015390	-	60	81.053	Takifugu_rubripes
ENSOMEG00000019072	wdhd1	67	81.250	ENSXCOG00000000845	-	59	81.250	Xiphophorus_couchianus