EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000019176 (Gene tree)
Gene ID: 112146590
Gene Symbol: alyref
Alias: -
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3434 bases
Position: chrNVQA01000010.1:8379895-8383328
Accession: 112146590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000017483	RRM_1	PF00076.22	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000026241	-	1736	-	ENSOMEP00000017483	268 (aa)	XP_024128258	UPI000CF7B817

Gene Model

Click here to download ENSOMEG00000019176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000019176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000019176	alyref	99	52.060	ENSOMEG00000007158	-	97	47.940

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000019176	alyref	100	54.212	ENSAPOG00000000183	-	100	48.288	Acanthochromis_polyacanthus
ENSOMEG00000019176	alyref	100	50.877	ENSACIG00000020351	-	100	49.129	Amphilophus_citrinellus
ENSOMEG00000019176	alyref	99	78.967	ENSACIG00000006351	alyref	98	83.883	Amphilophus_citrinellus
ENSOMEG00000019176	alyref	100	54.412	ENSAOCG00000019305	-	100	48.454	Amphiprion_ocellaris
ENSOMEG00000019176	alyref	100	77.656	ENSAOCG00000014012	alyref	100	85.714	Amphiprion_ocellaris
ENSOMEG00000019176	alyref	100	55.147	ENSAPEG00000013527	-	100	48.454	Amphiprion_percula
ENSOMEG00000019176	alyref	100	77.656	ENSAPEG00000014603	alyref	100	85.714	Amphiprion_percula
ENSOMEG00000019176	alyref	100	76.978	ENSATEG00000004307	alyref	100	81.655	Anabas_testudineus
ENSOMEG00000019176	alyref	100	55.797	ENSATEG00000000382	-	100	55.147	Anabas_testudineus
ENSOMEG00000019176	alyref	100	82.847	ENSACLG00000008432	alyref	100	88.686	Astatotilapia_calliptera
ENSOMEG00000019176	alyref	100	54.676	ENSACLG00000010184	-	100	53.929	Astatotilapia_calliptera
ENSOMEG00000019176	alyref	100	71.786	ENSAMXG00000007359	alyref	100	75.357	Astyanax_mexicanus
ENSOMEG00000019176	alyref	99	47.101	ENSCING00000013568	-	99	45.520	Ciona_intestinalis
ENSOMEG00000019176	alyref	99	42.652	ENSCSAVG00000003324	-	99	41.935	Ciona_savignyi
ENSOMEG00000019176	alyref	100	77.372	ENSCSEG00000017800	alyref	100	78.832	Cynoglossus_semilaevis
ENSOMEG00000019176	alyref	100	49.815	ENSCVAG00000007789	-	100	44.863	Cyprinodon_variegatus
ENSOMEG00000019176	alyref	100	84.074	ENSCVAG00000014869	alyref	100	87.037	Cyprinodon_variegatus
ENSOMEG00000019176	alyref	100	77.857	ENSDARG00000077732	alyref	100	77.143	Danio_rerio
ENSOMEG00000019176	alyref	97	44.523	FBgn0010774	Ref1	65	46.316	Drosophila_melanogaster
ENSOMEG00000019176	alyref	99	53.383	ENSEBUG00000008253	alyref	95	51.648	Eptatretus_burgeri
ENSOMEG00000019176	alyref	71	46.667	ENSEBUG00000006305	alyref	100	39.209	Eptatretus_burgeri
ENSOMEG00000019176	alyref	100	79.121	ENSELUG00000017178	alyref	100	71.795	Esox_lucius
ENSOMEG00000019176	alyref	100	70.714	ENSELUG00000008849	-	100	70.714	Esox_lucius
ENSOMEG00000019176	alyref	58	80.503	ENSFALG00000011923	-	96	75.484	Ficedula_albicollis
ENSOMEG00000019176	alyref	100	88.060	ENSFHEG00000019426	alyref	100	89.219	Fundulus_heteroclitus
ENSOMEG00000019176	alyref	100	48.339	ENSFHEG00000004698	-	100	44.637	Fundulus_heteroclitus
ENSOMEG00000019176	alyref	100	69.742	ENSGMOG00000009882	alyref	100	67.528	Gadus_morhua
ENSOMEG00000019176	alyref	68	58.854	ENSGMOG00000013122	-	100	59.375	Gadus_morhua
ENSOMEG00000019176	alyref	100	87.823	ENSGAFG00000006014	alyref	100	83.026	Gambusia_affinis
ENSOMEG00000019176	alyref	100	47.794	ENSGAFG00000007573	-	100	45.956	Gambusia_affinis
ENSOMEG00000019176	alyref	100	55.357	ENSHBUG00000001454	-	100	53.901	Haplochromis_burtoni
ENSOMEG00000019176	alyref	100	82.847	ENSHBUG00000020196	alyref	100	88.686	Haplochromis_burtoni
ENSOMEG00000019176	alyref	98	45.035	ENSHCOG00000012825	-	94	48.708	Hippocampus_comes
ENSOMEG00000019176	alyref	100	76.000	ENSIPUG00000009469	alyref	100	74.909	Ictalurus_punctatus
ENSOMEG00000019176	alyref	74	64.141	ENSSTOG00000016570	-	92	65.426	Ictidomys_tridecemlineatus
ENSOMEG00000019176	alyref	100	52.030	ENSKMAG00000006462	-	100	49.645	Kryptolebias_marmoratus
ENSOMEG00000019176	alyref	100	83.883	ENSKMAG00000008912	alyref	100	84.615	Kryptolebias_marmoratus
ENSOMEG00000019176	alyref	100	46.897	ENSLBEG00000005387	-	100	47.492	Labrus_bergylta
ENSOMEG00000019176	alyref	100	82.909	ENSLBEG00000023118	alyref	90	88.000	Labrus_bergylta
ENSOMEG00000019176	alyref	99	45.620	ENSLBEG00000012930	-	99	46.886	Labrus_bergylta
ENSOMEG00000019176	alyref	77	69.907	ENSLOCG00000013879	alyref	89	69.406	Lepisosteus_oculatus
ENSOMEG00000019176	alyref	100	52.941	ENSMAMG00000005464	-	100	50.000	Mastacembelus_armatus
ENSOMEG00000019176	alyref	100	84.672	ENSMAMG00000003034	alyref	100	83.577	Mastacembelus_armatus
ENSOMEG00000019176	alyref	100	54.317	ENSMZEG00005012096	-	100	54.093	Maylandia_zebra
ENSOMEG00000019176	alyref	100	82.847	ENSMZEG00005008639	alyref	100	88.686	Maylandia_zebra
ENSOMEG00000019176	alyref	99	47.566	ENSMMOG00000007032	-	98	45.196	Mola_mola
ENSOMEG00000019176	alyref	99	77.903	ENSMMOG00000012458	alyref	97	81.481	Mola_mola
ENSOMEG00000019176	alyref	100	50.690	ENSMALG00000006054	-	100	48.780	Monopterus_albus
ENSOMEG00000019176	alyref	100	59.206	ENSMLUG00000004098	-	100	57.762	Myotis_lucifugus
ENSOMEG00000019176	alyref	98	57.249	ENSMLUG00000022178	-	98	55.185	Myotis_lucifugus
ENSOMEG00000019176	alyref	100	60.364	ENSMLUG00000014372	-	100	57.857	Myotis_lucifugus
ENSOMEG00000019176	alyref	100	57.040	ENSMLUG00000006521	-	100	58.845	Myotis_lucifugus
ENSOMEG00000019176	alyref	98	57.934	ENSMLUG00000030671	-	98	56.458	Myotis_lucifugus
ENSOMEG00000019176	alyref	98	55.678	ENSMLUG00000009247	-	98	51.838	Myotis_lucifugus
ENSOMEG00000019176	alyref	98	52.797	ENSMLUG00000022467	-	98	53.214	Myotis_lucifugus
ENSOMEG00000019176	alyref	75	60.680	ENSMLUG00000028605	-	72	55.502	Myotis_lucifugus
ENSOMEG00000019176	alyref	100	69.517	ENSNGAG00000022014	-	100	66.045	Nannospalax_galili
ENSOMEG00000019176	alyref	100	82.909	ENSNBRG00000001747	alyref	100	88.727	Neolamprologus_brichardi
ENSOMEG00000019176	alyref	100	55.435	ENSNBRG00000017460	-	100	54.676	Neolamprologus_brichardi
ENSOMEG00000019176	alyref	100	79.496	ENSONIG00000019434	alyref	100	83.453	Oreochromis_niloticus
ENSOMEG00000019176	alyref	100	56.777	ENSONIG00000003296	-	100	56.727	Oreochromis_niloticus
ENSOMEG00000019176	alyref	99	41.587	ENSORLG00000001620	-	60	47.085	Oryzias_latipes
ENSOMEG00000019176	alyref	99	49.084	ENSORLG00020015673	-	99	46.207	Oryzias_latipes_hni
ENSOMEG00000019176	alyref	100	91.481	ENSORLG00020011942	alyref	100	94.444	Oryzias_latipes_hni
ENSOMEG00000019176	alyref	99	47.038	ENSORLG00015015143	-	99	46.897	Oryzias_latipes_hsok
ENSOMEG00000019176	alyref	100	93.309	ENSORLG00015022664	alyref	100	92.565	Oryzias_latipes_hsok
ENSOMEG00000019176	alyref	69	73.913	ENSPPAG00000036403	-	68	74.054	Pan_paniscus
ENSOMEG00000019176	alyref	100	71.691	ENSPKIG00000007070	alyref	100	68.864	Paramormyrops_kingsleyae
ENSOMEG00000019176	alyref	99	73.432	ENSPKIG00000006233	-	81	66.790	Paramormyrops_kingsleyae
ENSOMEG00000019176	alyref	99	80.224	ENSPMGG00000016600	alyref	91	71.956	Periophthalmus_magnuspinnatus
ENSOMEG00000019176	alyref	73	48.980	ENSPMGG00000012994	-	97	48.168	Periophthalmus_magnuspinnatus
ENSOMEG00000019176	alyref	100	64.312	ENSPEMG00000016628	-	100	62.313	Peromyscus_maniculatus_bairdii
ENSOMEG00000019176	alyref	100	83.824	ENSPFOG00000022825	alyref	99	82.721	Poecilia_formosa
ENSOMEG00000019176	alyref	100	47.101	ENSPFOG00000017094	-	100	43.103	Poecilia_formosa
ENSOMEG00000019176	alyref	100	86.347	ENSPLAG00000006948	alyref	100	83.395	Poecilia_latipinna
ENSOMEG00000019176	alyref	100	47.101	ENSPLAG00000014380	-	100	43.103	Poecilia_latipinna
ENSOMEG00000019176	alyref	100	47.101	ENSPMEG00000023039	-	100	43.103	Poecilia_mexicana
ENSOMEG00000019176	alyref	100	83.824	ENSPMEG00000003547	alyref	100	82.721	Poecilia_mexicana
ENSOMEG00000019176	alyref	100	86.716	ENSPREG00000015795	alyref	100	83.764	Poecilia_reticulata
ENSOMEG00000019176	alyref	100	48.897	ENSPREG00000003649	-	100	48.339	Poecilia_reticulata
ENSOMEG00000019176	alyref	99	51.429	ENSPNYG00000002879	-	98	52.364	Pundamilia_nyererei
ENSOMEG00000019176	alyref	100	82.847	ENSPNYG00000017498	alyref	100	88.686	Pundamilia_nyererei
ENSOMEG00000019176	alyref	100	76.087	ENSPNAG00000002531	alyref	100	76.087	Pygocentrus_nattereri
ENSOMEG00000019176	alyref	84	66.814	ENSSBOG00000030924	-	87	72.308	Saimiri_boliviensis_boliviensis
ENSOMEG00000019176	alyref	99	55.435	ENSSHAG00000000609	-	99	52.708	Sarcophilus_harrisii
ENSOMEG00000019176	alyref	99	56.716	ENSSHAG00000012866	-	99	54.851	Sarcophilus_harrisii
ENSOMEG00000019176	alyref	69	74.468	ENSSFOG00015003678	alyref	83	72.043	Scleropages_formosus
ENSOMEG00000019176	alyref	77	78.947	ENSSFOG00015003923	alyref	73	75.714	Scleropages_formosus
ENSOMEG00000019176	alyref	100	49.822	ENSSMAG00000011169	-	100	52.000	Scophthalmus_maximus
ENSOMEG00000019176	alyref	100	81.022	ENSSMAG00000009283	alyref	100	85.036	Scophthalmus_maximus
ENSOMEG00000019176	alyref	100	78.755	ENSSDUG00000016158	alyref	100	86.447	Seriola_dumerili
ENSOMEG00000019176	alyref	100	76.642	ENSSLDG00000017803	alyref	100	83.942	Seriola_lalandi_dorsalis
ENSOMEG00000019176	alyref	99	54.044	ENSSPAG00000017028	-	96	52.941	Stegastes_partitus
ENSOMEG00000019176	alyref	100	50.000	ENSTRUG00000003051	-	100	50.530	Takifugu_rubripes
ENSOMEG00000019176	alyref	100	51.087	ENSTNIG00000014136	-	100	47.601	Tetraodon_nigroviridis
ENSOMEG00000019176	alyref	100	76.364	ENSTNIG00000011595	alyref	100	75.273	Tetraodon_nigroviridis
ENSOMEG00000019176	alyref	70	75.532	ENSVVUG00000000272	-	82	75.532	Vulpes_vulpes
ENSOMEG00000019176	alyref	99	86.940	ENSXCOG00000018047	alyref	99	81.181	Xiphophorus_couchianus
ENSOMEG00000019176	alyref	100	47.445	ENSXMAG00000018086	-	100	43.448	Xiphophorus_maculatus
ENSOMEG00000019176	alyref	99	86.940	ENSXMAG00000012218	alyref	99	81.181	Xiphophorus_maculatus