EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000019231 (Gene tree)
Gene ID: 112137975
Gene Symbol: sf3b1
Alias: -
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 18640 bases
Position: chrNVQA01000039.1:616312-634951
Accession: 112137975
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000017534	SF3b1	PF08920.10	8.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000026292	-	5817	-	ENSOMEP00000017534	1315 (aa)	XP_024116276	UPI000CF83BF2

Gene Model

Click here to download ENSOMEG00000019231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000019231's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000019231	sf3b1	100	93.394	ENSG00000115524	SF3B1	100	93.394	Homo_sapiens
ENSOMEG00000019231	sf3b1	100	98.404	ENSAPOG00000011894	sf3b1	100	98.404	Acanthochromis_polyacanthus
ENSOMEG00000019231	sf3b1	99	93.277	ENSAMEG00000013809	SF3B1	99	93.277	Ailuropoda_melanoleuca
ENSOMEG00000019231	sf3b1	100	97.186	ENSACIG00000020910	sf3b1	97	97.186	Amphilophus_citrinellus
ENSOMEG00000019231	sf3b1	100	98.404	ENSAOCG00000004478	sf3b1	100	98.404	Amphiprion_ocellaris
ENSOMEG00000019231	sf3b1	100	98.404	ENSAPEG00000012937	sf3b1	100	98.404	Amphiprion_percula
ENSOMEG00000019231	sf3b1	100	98.023	ENSATEG00000020435	sf3b1	100	98.023	Anabas_testudineus
ENSOMEG00000019231	sf3b1	99	93.568	ENSAPLG00000003993	SF3B1	99	93.568	Anas_platyrhynchos
ENSOMEG00000019231	sf3b1	100	93.465	ENSACAG00000009612	SF3B1	100	93.465	Anolis_carolinensis
ENSOMEG00000019231	sf3b1	100	93.394	ENSANAG00000021577	SF3B1	100	94.777	Aotus_nancymaae
ENSOMEG00000019231	sf3b1	100	97.414	ENSACLG00000023470	sf3b1	100	97.414	Astatotilapia_calliptera
ENSOMEG00000019231	sf3b1	100	96.279	ENSAMXG00000002219	sf3b1	100	96.279	Astyanax_mexicanus
ENSOMEG00000019231	sf3b1	100	93.394	ENSBTAG00000008915	SF3B1	100	93.394	Bos_taurus
ENSOMEG00000019231	sf3b1	98	65.172	WBGene00011605	sftb-1	97	65.295	Caenorhabditis_elegans
ENSOMEG00000019231	sf3b1	100	93.394	ENSCJAG00000003902	SF3B1	100	93.394	Callithrix_jacchus
ENSOMEG00000019231	sf3b1	100	93.394	ENSCAFG00000010826	SF3B1	100	93.394	Canis_familiaris
ENSOMEG00000019231	sf3b1	100	93.394	ENSCAFG00020004750	SF3B1	100	93.394	Canis_lupus_dingo
ENSOMEG00000019231	sf3b1	100	93.394	ENSCHIG00000015226	SF3B1	100	93.394	Capra_hircus
ENSOMEG00000019231	sf3b1	100	93.318	ENSTSYG00000009214	SF3B1	100	93.318	Carlito_syrichta
ENSOMEG00000019231	sf3b1	99	93.222	ENSCAPG00000006547	SF3B1	99	93.222	Cavia_aperea
ENSOMEG00000019231	sf3b1	99	93.344	ENSCPOG00000009353	SF3B1	100	93.344	Cavia_porcellus
ENSOMEG00000019231	sf3b1	100	93.394	ENSCCAG00000020506	SF3B1	100	93.394	Cebus_capucinus
ENSOMEG00000019231	sf3b1	100	93.394	ENSCATG00000035735	SF3B1	100	93.394	Cercocebus_atys
ENSOMEG00000019231	sf3b1	99	93.349	ENSCLAG00000014767	SF3B1	99	93.349	Chinchilla_lanigera
ENSOMEG00000019231	sf3b1	100	93.394	ENSCSAG00000011505	SF3B1	100	93.394	Chlorocebus_sabaeus
ENSOMEG00000019231	sf3b1	76	92.360	ENSCHOG00000009860	SF3B1	76	92.360	Choloepus_hoffmanni
ENSOMEG00000019231	sf3b1	100	93.612	ENSCPBG00000021902	SF3B1	99	94.781	Chrysemys_picta_bellii
ENSOMEG00000019231	sf3b1	68	78.603	ENSCING00000002558	-	99	78.959	Ciona_intestinalis
ENSOMEG00000019231	sf3b1	99	80.211	ENSCSAVG00000002559	-	99	80.211	Ciona_savignyi
ENSOMEG00000019231	sf3b1	100	93.394	ENSCANG00000029415	SF3B1	100	93.394	Colobus_angolensis_palliatus
ENSOMEG00000019231	sf3b1	100	93.394	ENSCGRG00001016990	Sf3b1	100	93.394	Cricetulus_griseus_chok1gshd
ENSOMEG00000019231	sf3b1	100	93.394	ENSCGRG00000005301	Sf3b1	100	93.394	Cricetulus_griseus_crigri
ENSOMEG00000019231	sf3b1	100	93.612	ENSCSEG00000003860	sf3b1	100	93.612	Cynoglossus_semilaevis
ENSOMEG00000019231	sf3b1	96	98.416	ENSCVAG00000003680	sf3b1	99	98.416	Cyprinodon_variegatus
ENSOMEG00000019231	sf3b1	100	95.513	ENSDARG00000056138	sf3b1	100	95.513	Danio_rerio
ENSOMEG00000019231	sf3b1	100	93.323	ENSDNOG00000011754	SF3B1	100	93.323	Dasypus_novemcinctus
ENSOMEG00000019231	sf3b1	99	91.584	ENSDORG00000002399	Sf3b1	100	91.431	Dipodomys_ordii
ENSOMEG00000019231	sf3b1	100	75.880	FBgn0031266	Sf3b1	100	75.880	Drosophila_melanogaster
ENSOMEG00000019231	sf3b1	83	92.209	ENSETEG00000009188	SF3B1	100	92.209	Echinops_telfairi
ENSOMEG00000019231	sf3b1	99	85.976	ENSEBUG00000004325	sf3b1	100	88.458	Eptatretus_burgeri
ENSOMEG00000019231	sf3b1	100	93.394	ENSEASG00005020159	SF3B1	98	93.394	Equus_asinus_asinus
ENSOMEG00000019231	sf3b1	100	93.394	ENSECAG00000021657	SF3B1	98	93.394	Equus_caballus
ENSOMEG00000019231	sf3b1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSOMEG00000019231	sf3b1	100	95.468	ENSELUG00000005977	sf3b1	98	95.468	Esox_lucius
ENSOMEG00000019231	sf3b1	100	93.394	ENSFCAG00000005038	SF3B1	100	93.394	Felis_catus
ENSOMEG00000019231	sf3b1	99	93.645	ENSFALG00000004281	SF3B1	99	93.645	Ficedula_albicollis
ENSOMEG00000019231	sf3b1	100	93.394	ENSFDAG00000017510	SF3B1	100	93.394	Fukomys_damarensis
ENSOMEG00000019231	sf3b1	100	97.567	ENSFHEG00000014333	sf3b1	100	97.567	Fundulus_heteroclitus
ENSOMEG00000019231	sf3b1	100	94.917	ENSGMOG00000006773	sf3b1	100	95.296	Gadus_morhua
ENSOMEG00000019231	sf3b1	100	93.612	ENSGALG00000008038	SF3B1	100	93.612	Gallus_gallus
ENSOMEG00000019231	sf3b1	98	98.224	ENSGAFG00000000704	sf3b1	100	98.224	Gambusia_affinis
ENSOMEG00000019231	sf3b1	100	96.507	ENSGACG00000008839	sf3b1	100	96.507	Gasterosteus_aculeatus
ENSOMEG00000019231	sf3b1	100	92.976	ENSGAGG00000017478	SF3B1	100	92.976	Gopherus_agassizii
ENSOMEG00000019231	sf3b1	99	88.217	ENSGGOG00000009264	SF3B1	99	88.217	Gorilla_gorilla
ENSOMEG00000019231	sf3b1	99	97.487	ENSHBUG00000007705	sf3b1	99	97.487	Haplochromis_burtoni
ENSOMEG00000019231	sf3b1	99	93.349	ENSHGLG00000008285	-	99	93.349	Heterocephalus_glaber_female
ENSOMEG00000019231	sf3b1	99	91.361	ENSHGLG00100005535	-	99	91.361	Heterocephalus_glaber_male
ENSOMEG00000019231	sf3b1	100	96.823	ENSHCOG00000016775	sf3b1	100	96.823	Hippocampus_comes
ENSOMEG00000019231	sf3b1	100	96.201	ENSIPUG00000013171	sf3b1	100	96.201	Ictalurus_punctatus
ENSOMEG00000019231	sf3b1	100	93.394	ENSSTOG00000011034	SF3B1	100	93.394	Ictidomys_tridecemlineatus
ENSOMEG00000019231	sf3b1	99	93.323	ENSJJAG00000010903	Sf3b1	99	93.323	Jaculus_jaculus
ENSOMEG00000019231	sf3b1	100	97.043	ENSKMAG00000004009	sf3b1	100	97.043	Kryptolebias_marmoratus
ENSOMEG00000019231	sf3b1	100	96.654	ENSLBEG00000022208	sf3b1	100	96.654	Labrus_bergylta
ENSOMEG00000019231	sf3b1	99	90.122	ENSLACG00000014832	SF3B1	99	90.122	Latimeria_chalumnae
ENSOMEG00000019231	sf3b1	100	94.705	ENSLOCG00000003899	sf3b1	100	94.705	Lepisosteus_oculatus
ENSOMEG00000019231	sf3b1	100	93.394	ENSLAFG00000001956	SF3B1	100	93.394	Loxodonta_africana
ENSOMEG00000019231	sf3b1	99	93.349	ENSMMUG00000022430	SF3B1	99	93.349	Macaca_mulatta
ENSOMEG00000019231	sf3b1	100	93.394	ENSMNEG00000042333	SF3B1	100	94.777	Macaca_nemestrina
ENSOMEG00000019231	sf3b1	94	88.567	ENSMLEG00000026141	SF3B1	98	88.406	Mandrillus_leucophaeus
ENSOMEG00000019231	sf3b1	100	98.175	ENSMAMG00000010241	sf3b1	100	98.175	Mastacembelus_armatus
ENSOMEG00000019231	sf3b1	100	97.414	ENSMZEG00005021254	sf3b1	100	97.414	Maylandia_zebra
ENSOMEG00000019231	sf3b1	99	92.956	ENSMGAG00000007017	SF3B1	99	92.956	Meleagris_gallopavo
ENSOMEG00000019231	sf3b1	99	89.144	ENSMAUG00000009071	Sf3b1	99	89.144	Mesocricetus_auratus
ENSOMEG00000019231	sf3b1	100	93.394	ENSMICG00000013879	SF3B1	100	93.394	Microcebus_murinus
ENSOMEG00000019231	sf3b1	99	89.076	ENSMOCG00000000455	Sf3b1	99	89.076	Microtus_ochrogaster
ENSOMEG00000019231	sf3b1	84	97.091	ENSMMOG00000000475	sf3b1	100	97.091	Mola_mola
ENSOMEG00000019231	sf3b1	100	92.787	ENSMODG00000012275	SF3B1	100	92.787	Monodelphis_domestica
ENSOMEG00000019231	sf3b1	100	98.175	ENSMALG00000017211	sf3b1	100	98.175	Monopterus_albus
ENSOMEG00000019231	sf3b1	100	93.394	MGP_CAROLIEiJ_G0014141	Sf3b1	100	93.394	Mus_caroli
ENSOMEG00000019231	sf3b1	100	93.394	ENSMUSG00000025982	Sf3b1	100	93.394	Mus_musculus
ENSOMEG00000019231	sf3b1	100	93.394	MGP_SPRETEiJ_G0014947	Sf3b1	100	93.394	Mus_spretus
ENSOMEG00000019231	sf3b1	100	93.394	ENSMPUG00000007799	SF3B1	100	93.394	Mustela_putorius_furo
ENSOMEG00000019231	sf3b1	100	92.255	ENSMLUG00000000840	SF3B1	100	92.255	Myotis_lucifugus
ENSOMEG00000019231	sf3b1	99	93.069	ENSNGAG00000021884	-	100	93.069	Nannospalax_galili
ENSOMEG00000019231	sf3b1	100	92.564	ENSNBRG00000015816	sf3b1	100	92.629	Neolamprologus_brichardi
ENSOMEG00000019231	sf3b1	100	93.394	ENSNLEG00000006861	SF3B1	100	93.394	Nomascus_leucogenys
ENSOMEG00000019231	sf3b1	69	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSOMEG00000019231	sf3b1	100	80.981	ENSOPRG00000008596	SF3B1	100	81.129	Ochotona_princeps
ENSOMEG00000019231	sf3b1	100	93.394	ENSODEG00000011153	-	100	93.394	Octodon_degus
ENSOMEG00000019231	sf3b1	100	97.414	ENSONIG00000013758	sf3b1	100	97.414	Oreochromis_niloticus
ENSOMEG00000019231	sf3b1	82	95.849	ENSOCUG00000012722	-	96	95.849	Oryctolagus_cuniculus
ENSOMEG00000019231	sf3b1	100	99.240	ENSORLG00000020219	sf3b1	100	99.240	Oryzias_latipes
ENSOMEG00000019231	sf3b1	100	99.240	ENSORLG00020001746	sf3b1	100	99.240	Oryzias_latipes_hni
ENSOMEG00000019231	sf3b1	64	98.223	ENSORLG00015001759	sf3b1	98	98.223	Oryzias_latipes_hsok
ENSOMEG00000019231	sf3b1	100	93.394	ENSOARG00000015374	SF3B1	100	93.394	Ovis_aries
ENSOMEG00000019231	sf3b1	100	93.394	ENSPPAG00000035007	SF3B1	100	93.394	Pan_paniscus
ENSOMEG00000019231	sf3b1	100	93.394	ENSPPRG00000009090	SF3B1	100	93.394	Panthera_pardus
ENSOMEG00000019231	sf3b1	100	93.394	ENSPTIG00000021557	SF3B1	100	93.394	Panthera_tigris_altaica
ENSOMEG00000019231	sf3b1	99	86.117	ENSPTRG00000012771	SF3B1	99	86.117	Pan_troglodytes
ENSOMEG00000019231	sf3b1	100	93.394	ENSPANG00000013417	SF3B1	100	93.394	Papio_anubis
ENSOMEG00000019231	sf3b1	100	95.675	ENSPKIG00000000784	sf3b1	100	95.675	Paramormyrops_kingsleyae
ENSOMEG00000019231	sf3b1	99	92.490	ENSPSIG00000017222	SF3B1	98	92.490	Pelodiscus_sinensis
ENSOMEG00000019231	sf3b1	91	96.977	ENSPMGG00000004330	sf3b1	99	96.977	Periophthalmus_magnuspinnatus
ENSOMEG00000019231	sf3b1	99	93.349	ENSPEMG00000010699	Sf3b1	100	93.349	Peromyscus_maniculatus_bairdii
ENSOMEG00000019231	sf3b1	100	88.662	ENSPMAG00000001311	sf3b1	100	88.964	Petromyzon_marinus
ENSOMEG00000019231	sf3b1	100	92.787	ENSPCIG00000010642	SF3B1	100	92.787	Phascolarctos_cinereus
ENSOMEG00000019231	sf3b1	100	98.328	ENSPFOG00000000073	sf3b1	100	98.328	Poecilia_formosa
ENSOMEG00000019231	sf3b1	100	98.327	ENSPLAG00000002293	sf3b1	100	98.327	Poecilia_latipinna
ENSOMEG00000019231	sf3b1	100	98.403	ENSPMEG00000000446	sf3b1	98	98.403	Poecilia_mexicana
ENSOMEG00000019231	sf3b1	100	98.479	ENSPREG00000019652	sf3b1	100	98.479	Poecilia_reticulata
ENSOMEG00000019231	sf3b1	100	96.768	ENSPPYG00000013044	SF3B1	100	96.768	Pongo_abelii
ENSOMEG00000019231	sf3b1	100	93.242	ENSPCAG00000009292	SF3B1	100	93.242	Procavia_capensis
ENSOMEG00000019231	sf3b1	100	93.394	ENSPCOG00000024074	SF3B1	100	93.394	Propithecus_coquereli
ENSOMEG00000019231	sf3b1	100	93.394	ENSPVAG00000008302	SF3B1	100	93.394	Pteropus_vampyrus
ENSOMEG00000019231	sf3b1	100	97.338	ENSPNYG00000014939	sf3b1	100	97.338	Pundamilia_nyererei
ENSOMEG00000019231	sf3b1	100	96.279	ENSPNAG00000008288	sf3b1	100	96.279	Pygocentrus_nattereri
ENSOMEG00000019231	sf3b1	100	93.394	ENSRNOG00000013516	Sf3b1	100	93.394	Rattus_norvegicus
ENSOMEG00000019231	sf3b1	99	89.658	ENSRBIG00000026096	SF3B1	100	89.658	Rhinopithecus_bieti
ENSOMEG00000019231	sf3b1	100	93.394	ENSRROG00000031308	SF3B1	100	93.394	Rhinopithecus_roxellana
ENSOMEG00000019231	sf3b1	100	93.394	ENSSBOG00000020080	SF3B1	100	93.394	Saimiri_boliviensis_boliviensis
ENSOMEG00000019231	sf3b1	100	92.787	ENSSHAG00000017564	SF3B1	100	92.787	Sarcophilus_harrisii
ENSOMEG00000019231	sf3b1	100	96.049	ENSSFOG00015021535	sf3b1	100	96.049	Scleropages_formosus
ENSOMEG00000019231	sf3b1	99	96.965	ENSSMAG00000013977	sf3b1	99	96.965	Scophthalmus_maximus
ENSOMEG00000019231	sf3b1	100	97.795	ENSSDUG00000017422	sf3b1	100	97.795	Seriola_dumerili
ENSOMEG00000019231	sf3b1	100	97.719	ENSSLDG00000019495	sf3b1	100	97.719	Seriola_lalandi_dorsalis
ENSOMEG00000019231	sf3b1	75	98.592	ENSSARG00000007016	SF3B1	75	98.592	Sorex_araneus
ENSOMEG00000019231	sf3b1	100	93.460	ENSSPUG00000000410	SF3B1	100	93.460	Sphenodon_punctatus
ENSOMEG00000019231	sf3b1	100	98.479	ENSSPAG00000010451	sf3b1	99	98.479	Stegastes_partitus
ENSOMEG00000019231	sf3b1	91	93.012	ENSSSCG00000016075	SF3B1	100	94.777	Sus_scrofa
ENSOMEG00000019231	sf3b1	100	93.612	ENSTGUG00000010553	SF3B1	100	93.612	Taeniopygia_guttata
ENSOMEG00000019231	sf3b1	100	97.186	ENSTRUG00000015534	sf3b1	100	97.186	Takifugu_rubripes
ENSOMEG00000019231	sf3b1	84	97.004	ENSTBEG00000008714	SF3B1	93	97.004	Tupaia_belangeri
ENSOMEG00000019231	sf3b1	92	93.173	ENSTTRG00000003414	SF3B1	92	93.173	Tursiops_truncatus
ENSOMEG00000019231	sf3b1	84	97.571	ENSUAMG00000018506	SF3B1	99	97.571	Ursus_americanus
ENSOMEG00000019231	sf3b1	100	93.394	ENSUMAG00000020945	SF3B1	100	93.394	Ursus_maritimus
ENSOMEG00000019231	sf3b1	95	93.268	ENSVPAG00000005798	SF3B1	96	93.268	Vicugna_pacos
ENSOMEG00000019231	sf3b1	100	93.394	ENSVVUG00000025948	SF3B1	95	93.394	Vulpes_vulpes
ENSOMEG00000019231	sf3b1	100	91.951	ENSXETG00000013339	sf3b1	100	91.951	Xenopus_tropicalis
ENSOMEG00000019231	sf3b1	100	93.916	ENSXCOG00000018086	sf3b1	100	94.221	Xiphophorus_couchianus
ENSOMEG00000019231	sf3b1	100	98.403	ENSXMAG00000007369	sf3b1	100	98.403	Xiphophorus_maculatus