EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000019321 (Gene tree)
Gene ID: 112148814
Gene Symbol: slirp
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 2887 bases
Position: chrNVQA01000001.1:3114594-3117480
Accession: 112148814
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000033363	RRM_1	PF00076.22	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000026403	-	303	-	ENSOMEP00000033363	100 (aa)	XP_024131947	UPI000CF7E7AD

Gene Model

Click here to download ENSOMEG00000019321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000019321's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000019321	slirp	83	31.081	ENSOMEG00000023772	hnrnpabb	50	31.081

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000019321	slirp	83	56.627	ENSG00000119705	SLIRP	92	58.571	Homo_sapiens
ENSOMEG00000019321	slirp	100	80.000	ENSAPOG00000001298	slirp	100	80.000	Acanthochromis_polyacanthus
ENSOMEG00000019321	slirp	70	58.571	ENSAMEG00000003975	SLIRP	77	58.571	Ailuropoda_melanoleuca
ENSOMEG00000019321	slirp	98	82.653	ENSACIG00000023083	slirp	97	82.653	Amphilophus_citrinellus
ENSOMEG00000019321	slirp	98	80.612	ENSAOCG00000006342	slirp	99	80.612	Amphiprion_ocellaris
ENSOMEG00000019321	slirp	97	80.412	ENSAPEG00000015719	-	99	80.412	Amphiprion_percula
ENSOMEG00000019321	slirp	98	80.612	ENSAPEG00000015917	slirp	99	80.612	Amphiprion_percula
ENSOMEG00000019321	slirp	100	76.000	ENSATEG00000013525	slirp	100	76.000	Anabas_testudineus
ENSOMEG00000019321	slirp	98	62.245	ENSAMXG00000018693	slirp	98	62.245	Astyanax_mexicanus
ENSOMEG00000019321	slirp	74	60.811	ENSCJAG00000016946	SLIRP	72	59.701	Callithrix_jacchus
ENSOMEG00000019321	slirp	88	54.444	ENSCAFG00020015876	-	81	54.444	Canis_lupus_dingo
ENSOMEG00000019321	slirp	88	53.409	ENSCCAG00000030130	SLIRP	81	53.409	Cebus_capucinus
ENSOMEG00000019321	slirp	76	57.895	ENSCATG00000036327	SLIRP	72	59.701	Cercocebus_atys
ENSOMEG00000019321	slirp	89	55.056	ENSCSAG00000011736	SLIRP	80	55.056	Chlorocebus_sabaeus
ENSOMEG00000019321	slirp	81	65.432	ENSCPBG00000026327	SLIRP	82	65.432	Chrysemys_picta_bellii
ENSOMEG00000019321	slirp	67	62.687	ENSCANG00000032892	SLIRP	68	62.687	Colobus_angolensis_palliatus
ENSOMEG00000019321	slirp	88	50.000	ENSCGRG00001024068	Slirp	81	50.000	Cricetulus_griseus_chok1gshd
ENSOMEG00000019321	slirp	88	50.000	ENSCGRG00000017440	Slirp	81	50.000	Cricetulus_griseus_crigri
ENSOMEG00000019321	slirp	84	60.714	ENSCSEG00000015766	slirp	86	60.714	Cynoglossus_semilaevis
ENSOMEG00000019321	slirp	90	76.667	ENSCVAG00000012504	slirp	86	76.667	Cyprinodon_variegatus
ENSOMEG00000019321	slirp	95	77.895	ENSDARG00000097753	slirp	95	77.551	Danio_rerio
ENSOMEG00000019321	slirp	87	48.276	ENSDNOG00000007721	SLIRP	67	51.351	Dasypus_novemcinctus
ENSOMEG00000019321	slirp	75	54.667	ENSDORG00000012379	Slirp	68	54.667	Dipodomys_ordii
ENSOMEG00000019321	slirp	88	48.864	ENSETEG00000010345	SLIRP	81	48.864	Echinops_telfairi
ENSOMEG00000019321	slirp	89	53.933	ENSEASG00005020193	SLIRP	80	53.933	Equus_asinus_asinus
ENSOMEG00000019321	slirp	98	46.465	ENSEEUG00000007257	SLIRP	98	46.465	Erinaceus_europaeus
ENSOMEG00000019321	slirp	97	74.227	ENSELUG00000016800	slirp	96	74.227	Esox_lucius
ENSOMEG00000019321	slirp	67	59.701	ENSFCAG00000036326	SLIRP	68	59.701	Felis_catus
ENSOMEG00000019321	slirp	78	53.846	ENSFALG00000012583	SLIRP	85	51.111	Ficedula_albicollis
ENSOMEG00000019321	slirp	85	54.023	ENSFDAG00000008347	SLIRP	77	54.023	Fukomys_damarensis
ENSOMEG00000019321	slirp	80	80.000	ENSFHEG00000004709	slirp	87	80.000	Fundulus_heteroclitus
ENSOMEG00000019321	slirp	97	75.258	ENSGMOG00000016948	slirp	93	75.258	Gadus_morhua
ENSOMEG00000019321	slirp	92	51.064	ENSGALG00000031238	SLIRP	95	51.064	Gallus_gallus
ENSOMEG00000019321	slirp	100	76.000	ENSGAFG00000010998	slirp	100	76.000	Gambusia_affinis
ENSOMEG00000019321	slirp	82	81.707	ENSGACG00000020137	slirp	95	81.707	Gasterosteus_aculeatus
ENSOMEG00000019321	slirp	92	66.667	ENSGAGG00000009953	SLIRP	64	66.667	Gopherus_agassizii
ENSOMEG00000019321	slirp	83	56.627	ENSGGOG00000011059	-	72	59.701	Gorilla_gorilla
ENSOMEG00000019321	slirp	88	48.889	ENSHGLG00000018491	SLIRP	81	48.889	Heterocephalus_glaber_female
ENSOMEG00000019321	slirp	88	48.889	ENSHGLG00100014153	SLIRP	81	48.889	Heterocephalus_glaber_male
ENSOMEG00000019321	slirp	96	79.167	ENSHCOG00000006795	slirp	97	79.167	Hippocampus_comes
ENSOMEG00000019321	slirp	98	75.510	ENSIPUG00000010214	SLIRP	98	75.510	Ictalurus_punctatus
ENSOMEG00000019321	slirp	89	50.562	ENSSTOG00000034316	SLIRP	80	50.562	Ictidomys_tridecemlineatus
ENSOMEG00000019321	slirp	100	65.000	ENSKMAG00000002038	slirp	96	65.000	Kryptolebias_marmoratus
ENSOMEG00000019321	slirp	100	71.000	ENSLBEG00000007564	slirp	100	71.000	Labrus_bergylta
ENSOMEG00000019321	slirp	97	72.165	ENSLACG00000013434	SLIRP	93	72.165	Latimeria_chalumnae
ENSOMEG00000019321	slirp	88	50.000	ENSMFAG00000042960	SLIRP	72	59.701	Macaca_fascicularis
ENSOMEG00000019321	slirp	83	55.422	ENSMMUG00000029256	SLIRP	72	59.701	Macaca_mulatta
ENSOMEG00000019321	slirp	88	50.000	ENSMNEG00000028921	SLIRP	72	59.701	Macaca_nemestrina
ENSOMEG00000019321	slirp	67	59.701	ENSMLEG00000043644	SLIRP	68	59.701	Mandrillus_leucophaeus
ENSOMEG00000019321	slirp	98	85.714	ENSMZEG00005004617	slirp	99	85.714	Maylandia_zebra
ENSOMEG00000019321	slirp	89	51.685	ENSMAUG00000003857	Slirp	80	51.685	Mesocricetus_auratus
ENSOMEG00000019321	slirp	76	57.895	ENSMICG00000012080	SLIRP	67	58.333	Microcebus_murinus
ENSOMEG00000019321	slirp	71	59.155	ENSMOCG00000016019	Slirp	69	57.143	Microtus_ochrogaster
ENSOMEG00000019321	slirp	100	85.000	ENSMMOG00000018268	slirp	100	85.000	Mola_mola
ENSOMEG00000019321	slirp	70	52.857	ENSMODG00000005207	-	99	52.857	Monodelphis_domestica
ENSOMEG00000019321	slirp	100	75.000	ENSMALG00000012581	slirp	100	75.000	Monopterus_albus
ENSOMEG00000019321	slirp	74	58.108	MGP_CAROLIEiJ_G0017995	Slirp	69	58.108	Mus_caroli
ENSOMEG00000019321	slirp	74	58.108	ENSMUSG00000021040	Slirp	71	57.143	Mus_musculus
ENSOMEG00000019321	slirp	74	58.108	MGP_SPRETEiJ_G0018840	Slirp	66	58.108	Mus_spretus
ENSOMEG00000019321	slirp	84	57.143	ENSMLUG00000029544	-	74	57.143	Myotis_lucifugus
ENSOMEG00000019321	slirp	86	55.814	ENSMLUG00000024998	-	85	53.608	Myotis_lucifugus
ENSOMEG00000019321	slirp	74	52.703	ENSNGAG00000016363	Slirp	71	52.703	Nannospalax_galili
ENSOMEG00000019321	slirp	90	48.889	ENSNLEG00000027238	-	84	48.889	Nomascus_leucogenys
ENSOMEG00000019321	slirp	90	50.000	ENSNLEG00000032459	-	81	50.000	Nomascus_leucogenys
ENSOMEG00000019321	slirp	76	59.211	ENSODEG00000012580	SLIRP	76	58.571	Octodon_degus
ENSOMEG00000019321	slirp	98	84.694	ENSONIG00000011692	slirp	99	84.694	Oreochromis_niloticus
ENSOMEG00000019321	slirp	75	65.333	ENSOANG00000022366	SLIRP	68	65.333	Ornithorhynchus_anatinus
ENSOMEG00000019321	slirp	100	94.000	ENSORLG00000010761	slirp	78	94.000	Oryzias_latipes
ENSOMEG00000019321	slirp	100	93.000	ENSORLG00020022188	slirp	100	93.000	Oryzias_latipes_hni
ENSOMEG00000019321	slirp	99	91.919	ENSORLG00015020171	slirp	98	91.919	Oryzias_latipes_hsok
ENSOMEG00000019321	slirp	83	57.831	ENSPPAG00000040710	-	75	57.831	Pan_paniscus
ENSOMEG00000019321	slirp	67	59.701	ENSPPRG00000014350	SLIRP	68	59.701	Panthera_pardus
ENSOMEG00000019321	slirp	67	59.701	ENSPTIG00000014196	SLIRP	68	59.701	Panthera_tigris_altaica
ENSOMEG00000019321	slirp	83	56.627	ENSPTRG00000030691	SLIRP	77	56.627	Pan_troglodytes
ENSOMEG00000019321	slirp	74	59.459	ENSPANG00000026323	SLIRP	72	61.194	Papio_anubis
ENSOMEG00000019321	slirp	66	72.727	ENSPKIG00000008831	slirp	65	72.727	Paramormyrops_kingsleyae
ENSOMEG00000019321	slirp	80	78.750	ENSPMGG00000010541	slirp	92	78.750	Periophthalmus_magnuspinnatus
ENSOMEG00000019321	slirp	71	56.338	ENSPEMG00000013234	Slirp	69	54.286	Peromyscus_maniculatus_bairdii
ENSOMEG00000019321	slirp	85	51.765	ENSPMAG00000009355	slirp	94	51.765	Petromyzon_marinus
ENSOMEG00000019321	slirp	79	48.101	ENSPCIG00000026842	-	85	48.101	Phascolarctos_cinereus
ENSOMEG00000019321	slirp	99	74.747	ENSPFOG00000006758	slirp	99	74.747	Poecilia_formosa
ENSOMEG00000019321	slirp	99	75.758	ENSPLAG00000011140	slirp	99	75.758	Poecilia_latipinna
ENSOMEG00000019321	slirp	99	74.747	ENSPMEG00000019535	slirp	99	74.747	Poecilia_mexicana
ENSOMEG00000019321	slirp	99	74.747	ENSPREG00000011673	slirp	99	74.747	Poecilia_reticulata
ENSOMEG00000019321	slirp	70	57.143	ENSPPYG00000006030	SLIRP	68	55.405	Pongo_abelii
ENSOMEG00000019321	slirp	81	56.790	ENSPCOG00000015159	SLIRP	70	56.790	Propithecus_coquereli
ENSOMEG00000019321	slirp	98	77.551	ENSPNAG00000008633	slirp	99	77.551	Pygocentrus_nattereri
ENSOMEG00000019321	slirp	65	61.538	ENSRBIG00000031396	-	65	61.538	Rhinopithecus_bieti
ENSOMEG00000019321	slirp	67	59.701	ENSRBIG00000032998	-	62	59.701	Rhinopithecus_bieti
ENSOMEG00000019321	slirp	83	53.012	ENSRBIG00000035817	-	76	53.012	Rhinopithecus_bieti
ENSOMEG00000019321	slirp	88	55.682	ENSRBIG00000032222	-	81	55.682	Rhinopithecus_bieti
ENSOMEG00000019321	slirp	88	55.682	ENSRROG00000036656	-	81	55.682	Rhinopithecus_roxellana
ENSOMEG00000019321	slirp	67	61.194	ENSRROG00000017133	-	70	61.194	Rhinopithecus_roxellana
ENSOMEG00000019321	slirp	71	61.972	ENSRROG00000041312	-	70	61.972	Rhinopithecus_roxellana
ENSOMEG00000019321	slirp	65	63.077	ENSRROG00000035604	-	65	63.077	Rhinopithecus_roxellana
ENSOMEG00000019321	slirp	73	57.534	ENSSBOG00000020014	SLIRP	72	61.194	Saimiri_boliviensis_boliviensis
ENSOMEG00000019321	slirp	98	62.245	ENSSFOG00015011165	slirp	98	62.245	Scleropages_formosus
ENSOMEG00000019321	slirp	100	56.863	ENSSMAG00000012930	slirp	100	56.863	Scophthalmus_maximus
ENSOMEG00000019321	slirp	100	82.000	ENSSDUG00000021883	slirp	66	82.000	Seriola_dumerili
ENSOMEG00000019321	slirp	100	82.000	ENSSLDG00000023136	slirp	91	82.000	Seriola_lalandi_dorsalis
ENSOMEG00000019321	slirp	91	59.794	ENSSPUG00000009346	SLIRP	99	59.794	Sphenodon_punctatus
ENSOMEG00000019321	slirp	100	75.000	ENSSPAG00000013477	slirp	100	75.000	Stegastes_partitus
ENSOMEG00000019321	slirp	89	52.809	ENSSSCG00000028167	SLIRP	80	52.809	Sus_scrofa
ENSOMEG00000019321	slirp	78	57.692	ENSTGUG00000012337	SLIRP	87	52.174	Taeniopygia_guttata
ENSOMEG00000019321	slirp	98	73.737	ENSTRUG00000020127	slirp	98	73.737	Takifugu_rubripes
ENSOMEG00000019321	slirp	88	54.945	ENSUAMG00000022445	SLIRP	81	54.945	Ursus_americanus
ENSOMEG00000019321	slirp	76	60.526	ENSUMAG00000007166	SLIRP	68	60.526	Ursus_maritimus
ENSOMEG00000019321	slirp	88	53.409	ENSVPAG00000001781	SLIRP	81	53.409	Vicugna_pacos
ENSOMEG00000019321	slirp	88	54.945	ENSVVUG00000004436	SLIRP	81	54.945	Vulpes_vulpes
ENSOMEG00000019321	slirp	81	71.605	ENSXETG00000030343	SLIRP	91	71.605	Xenopus_tropicalis
ENSOMEG00000019321	slirp	100	75.000	ENSXCOG00000009422	slirp	100	75.000	Xiphophorus_couchianus
ENSOMEG00000019321	slirp	100	77.000	ENSXMAG00000015655	slirp	100	77.000	Xiphophorus_maculatus