EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000019555 (Gene tree)
Gene ID: 112137493
Gene Symbol: parn
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 9980 bases
Position: chrNVQA01000036.1:5123759-5133738
Accession: 112137493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000033499	RNA_bind	PF08675.11	1.2e-32	1	1
ENSOMEP00000033499	CAF1	PF04857.20	3.7e-89	1	1
ENSOMEP00000033488	CAF1	PF04857.20	3.1e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000026633	-	627	-	ENSOMEP00000033488	208 (aa)	-	-
ENSOMET00000034999	-	4555	-	ENSOMEP00000033499	672 (aa)	XP_024115600	UPI000CF7FBDA

Gene Model

Click here to download ENSOMEG00000019555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000019555's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000019555	parn	99	72.596	ENSG00000140694	PARN	100	72.596	Homo_sapiens
ENSOMEG00000019555	parn	97	86.207	ENSAPOG00000019730	-	100	86.207	Acanthochromis_polyacanthus
ENSOMEG00000019555	parn	100	65.533	ENSAMEG00000011208	PARN	100	65.533	Ailuropoda_melanoleuca
ENSOMEG00000019555	parn	97	70.455	ENSACIG00000000619	parn	99	78.091	Amphilophus_citrinellus
ENSOMEG00000019555	parn	100	81.132	ENSAOCG00000003465	parn	100	80.842	Amphiprion_ocellaris
ENSOMEG00000019555	parn	73	87.780	ENSAPEG00000010661	parn	94	87.780	Amphiprion_percula
ENSOMEG00000019555	parn	100	80.292	ENSATEG00000004661	parn	100	80.758	Anabas_testudineus
ENSOMEG00000019555	parn	95	66.667	ENSAPLG00000013914	PARN	91	72.964	Anas_platyrhynchos
ENSOMEG00000019555	parn	97	67.117	ENSACAG00000004973	PARN	100	64.714	Anolis_carolinensis
ENSOMEG00000019555	parn	97	68.326	ENSANAG00000031516	PARN	91	79.661	Aotus_nancymaae
ENSOMEG00000019555	parn	100	80.088	ENSACLG00000004742	parn	100	80.234	Astatotilapia_calliptera
ENSOMEG00000019555	parn	100	71.958	ENSAMXG00000012390	parn	97	75.503	Astyanax_mexicanus
ENSOMEG00000019555	parn	97	66.968	ENSBTAG00000018097	PARN	90	72.467	Bos_taurus
ENSOMEG00000019555	parn	97	67.873	ENSCJAG00000015866	PARN	91	79.661	Callithrix_jacchus
ENSOMEG00000019555	parn	97	66.063	ENSCAFG00000018795	PARN	99	66.364	Canis_familiaris
ENSOMEG00000019555	parn	97	66.516	ENSCAFG00020024126	PARN	99	66.515	Canis_lupus_dingo
ENSOMEG00000019555	parn	97	66.968	ENSCHIG00000018143	PARN	92	72.373	Capra_hircus
ENSOMEG00000019555	parn	93	45.327	ENSCAPG00000007984	PARN	79	50.813	Cavia_aperea
ENSOMEG00000019555	parn	97	67.421	ENSCPOG00000002263	PARN	91	71.380	Cavia_porcellus
ENSOMEG00000019555	parn	97	67.873	ENSCCAG00000030367	PARN	91	79.661	Cebus_capucinus
ENSOMEG00000019555	parn	97	67.421	ENSCATG00000041368	PARN	95	77.612	Cercocebus_atys
ENSOMEG00000019555	parn	97	67.421	ENSCLAG00000015406	PARN	91	72.666	Chinchilla_lanigera
ENSOMEG00000019555	parn	97	67.421	ENSCSAG00000008142	PARN	92	73.051	Chlorocebus_sabaeus
ENSOMEG00000019555	parn	94	66.355	ENSCHOG00000007014	PARN	91	56.920	Choloepus_hoffmanni
ENSOMEG00000019555	parn	75	72.137	ENSCPBG00000006609	PARN	90	72.137	Chrysemys_picta_bellii
ENSOMEG00000019555	parn	96	36.283	ENSCING00000010142	-	99	42.135	Ciona_intestinalis
ENSOMEG00000019555	parn	97	60.444	ENSCANG00000028849	-	88	79.661	Colobus_angolensis_palliatus
ENSOMEG00000019555	parn	97	68.627	ENSCANG00000023734	-	100	68.627	Colobus_angolensis_palliatus
ENSOMEG00000019555	parn	97	63.182	ENSCGRG00001012096	Parn	100	64.487	Cricetulus_griseus_chok1gshd
ENSOMEG00000019555	parn	97	63.182	ENSCGRG00000004939	Parn	100	64.487	Cricetulus_griseus_crigri
ENSOMEG00000019555	parn	100	77.438	ENSCSEG00000002064	parn	100	78.325	Cynoglossus_semilaevis
ENSOMEG00000019555	parn	100	83.138	ENSCVAG00000014848	parn	100	83.138	Cyprinodon_variegatus
ENSOMEG00000019555	parn	100	66.226	ENSDARG00000102634	parn	100	80.000	Danio_rerio
ENSOMEG00000019555	parn	97	66.968	ENSDNOG00000000833	PARN	94	77.985	Dasypus_novemcinctus
ENSOMEG00000019555	parn	97	71.078	ENSDORG00000027812	-	100	71.078	Dipodomys_ordii
ENSOMEG00000019555	parn	97	65.471	ENSETEG00000014828	-	69	72.727	Echinops_telfairi
ENSOMEG00000019555	parn	97	66.063	ENSEASG00005011400	PARN	99	66.667	Equus_asinus_asinus
ENSOMEG00000019555	parn	97	65.158	ENSECAG00000017792	PARN	99	66.364	Equus_caballus
ENSOMEG00000019555	parn	97	57.207	ENSEEUG00000010370	PARN	78	64.414	Erinaceus_europaeus
ENSOMEG00000019555	parn	100	72.328	ENSELUG00000013139	parn	90	72.515	Esox_lucius
ENSOMEG00000019555	parn	97	66.968	ENSFCAG00000044961	PARN	89	77.966	Felis_catus
ENSOMEG00000019555	parn	94	66.822	ENSFALG00000003911	PARN	93	71.070	Ficedula_albicollis
ENSOMEG00000019555	parn	97	66.968	ENSFDAG00000009234	PARN	92	71.307	Fukomys_damarensis
ENSOMEG00000019555	parn	97	71.889	ENSFHEG00000013738	parn	92	89.831	Fundulus_heteroclitus
ENSOMEG00000019555	parn	97	73.516	ENSGMOG00000003231	parn	99	82.117	Gadus_morhua
ENSOMEG00000019555	parn	97	67.421	ENSGALG00000003091	PARN	92	73.254	Gallus_gallus
ENSOMEG00000019555	parn	100	81.223	ENSGAFG00000011061	parn	100	81.223	Gambusia_affinis
ENSOMEG00000019555	parn	97	75.342	ENSGACG00000019501	parn	100	73.442	Gasterosteus_aculeatus
ENSOMEG00000019555	parn	97	67.421	ENSGGOG00000025224	PARN	92	79.661	Gorilla_gorilla
ENSOMEG00000019555	parn	100	80.584	ENSHBUG00000017906	parn	100	80.730	Haplochromis_burtoni
ENSOMEG00000019555	parn	97	67.873	ENSHGLG00000010886	PARN	99	66.769	Heterocephalus_glaber_female
ENSOMEG00000019555	parn	97	67.873	ENSHGLG00100014659	PARN	99	66.769	Heterocephalus_glaber_male
ENSOMEG00000019555	parn	94	77.465	ENSHCOG00000008683	parn	96	79.391	Hippocampus_comes
ENSOMEG00000019555	parn	100	61.640	ENSIPUG00000012401	parn	100	61.347	Ictalurus_punctatus
ENSOMEG00000019555	parn	97	66.516	ENSSTOG00000007519	PARN	91	72.759	Ictidomys_tridecemlineatus
ENSOMEG00000019555	parn	97	66.063	ENSJJAG00000023049	Parn	92	72.069	Jaculus_jaculus
ENSOMEG00000019555	parn	100	83.455	ENSKMAG00000009462	parn	100	83.455	Kryptolebias_marmoratus
ENSOMEG00000019555	parn	93	83.492	ENSLBEG00000009167	parn	99	83.492	Labrus_bergylta
ENSOMEG00000019555	parn	97	60.360	ENSLACG00000004207	PARN	100	73.821	Latimeria_chalumnae
ENSOMEG00000019555	parn	100	69.628	ENSLOCG00000000715	parn	100	70.912	Lepisosteus_oculatus
ENSOMEG00000019555	parn	97	67.421	ENSLAFG00000015036	PARN	92	72.899	Loxodonta_africana
ENSOMEG00000019555	parn	92	30.144	ENSMFAG00000041296	PNLDC1	91	30.000	Macaca_fascicularis
ENSOMEG00000019555	parn	97	60.784	ENSMFAG00000044852	PARN	88	79.661	Macaca_fascicularis
ENSOMEG00000019555	parn	97	67.421	ENSMMUG00000018849	PARN	88	79.661	Macaca_mulatta
ENSOMEG00000019555	parn	92	30.144	ENSMMUG00000004181	PNLDC1	63	30.144	Macaca_mulatta
ENSOMEG00000019555	parn	97	67.421	ENSMNEG00000045108	PARN	88	79.661	Macaca_nemestrina
ENSOMEG00000019555	parn	97	67.421	ENSMLEG00000031743	PARN	88	79.661	Mandrillus_leucophaeus
ENSOMEG00000019555	parn	100	80.523	ENSMAMG00000006939	parn	100	80.523	Mastacembelus_armatus
ENSOMEG00000019555	parn	100	80.234	ENSMZEG00005013590	parn	100	80.381	Maylandia_zebra
ENSOMEG00000019555	parn	82	72.469	ENSMGAG00000001004	PARN	88	72.469	Meleagris_gallopavo
ENSOMEG00000019555	parn	97	55.455	ENSMAUG00000008025	Parn	100	58.874	Mesocricetus_auratus
ENSOMEG00000019555	parn	97	66.516	ENSMICG00000016053	PARN	91	77.966	Microcebus_murinus
ENSOMEG00000019555	parn	97	65.455	ENSMOCG00000022211	Parn	100	77.935	Microtus_ochrogaster
ENSOMEG00000019555	parn	97	71.818	ENSMMOG00000011333	parn	90	84.087	Mola_mola
ENSOMEG00000019555	parn	97	67.265	ENSMODG00000004915	PARN	99	79.678	Monodelphis_domestica
ENSOMEG00000019555	parn	96	80.395	ENSMALG00000019426	parn	94	86.823	Monopterus_albus
ENSOMEG00000019555	parn	97	63.636	MGP_CAROLIEiJ_G0020466	Parn	100	62.903	Mus_caroli
ENSOMEG00000019555	parn	97	63.182	ENSMUSG00000022685	Parn	100	76.829	Mus_musculus
ENSOMEG00000019555	parn	61	30.986	ENSMUSG00000073460	Pnldc1	66	35.036	Mus_musculus
ENSOMEG00000019555	parn	100	63.798	MGP_PahariEiJ_G0016172	Parn	100	63.650	Mus_pahari
ENSOMEG00000019555	parn	97	63.636	MGP_SPRETEiJ_G0021361	Parn	100	63.893	Mus_spretus
ENSOMEG00000019555	parn	100	65.926	ENSMPUG00000014464	PARN	100	66.124	Mustela_putorius_furo
ENSOMEG00000019555	parn	97	64.706	ENSMLUG00000005414	PARN	100	76.768	Myotis_lucifugus
ENSOMEG00000019555	parn	97	71.429	ENSNGAG00000024082	-	100	71.429	Nannospalax_galili
ENSOMEG00000019555	parn	82	84.601	ENSNBRG00000006805	parn	93	84.783	Neolamprologus_brichardi
ENSOMEG00000019555	parn	97	67.421	ENSNLEG00000010241	PARN	91	79.661	Nomascus_leucogenys
ENSOMEG00000019555	parn	78	55.114	ENSMEUG00000008178	-	83	55.114	Notamacropus_eugenii
ENSOMEG00000019555	parn	88	64.677	ENSOPRG00000012187	PARN	91	68.237	Ochotona_princeps
ENSOMEG00000019555	parn	85	67.944	ENSODEG00000001617	PARN	91	67.944	Octodon_degus
ENSOMEG00000019555	parn	100	81.022	ENSONIG00000000151	parn	100	81.168	Oreochromis_niloticus
ENSOMEG00000019555	parn	68	60.000	ENSOANG00000029996	-	93	68.657	Ornithorhynchus_anatinus
ENSOMEG00000019555	parn	95	65.741	ENSOCUG00000000322	PARN	91	72.137	Oryctolagus_cuniculus
ENSOMEG00000019555	parn	97	95.545	ENSORLG00000024893	-	100	95.545	Oryzias_latipes
ENSOMEG00000019555	parn	100	95.089	ENSORLG00020010313	parn	100	95.089	Oryzias_latipes_hni
ENSOMEG00000019555	parn	100	95.089	ENSORLG00015000300	parn	100	95.089	Oryzias_latipes_hsok
ENSOMEG00000019555	parn	97	65.471	ENSOGAG00000014626	PARN	100	77.016	Otolemur_garnettii
ENSOMEG00000019555	parn	56	31.496	ENSOGAG00000002298	-	56	31.496	Otolemur_garnettii
ENSOMEG00000019555	parn	97	66.968	ENSOARG00000007574	PARN	100	78.788	Ovis_aries
ENSOMEG00000019555	parn	97	67.421	ENSPPAG00000031438	PARN	91	79.661	Pan_paniscus
ENSOMEG00000019555	parn	97	66.968	ENSPPRG00000018583	PARN	89	77.966	Panthera_pardus
ENSOMEG00000019555	parn	97	66.968	ENSPTIG00000012135	PARN	89	77.966	Panthera_tigris_altaica
ENSOMEG00000019555	parn	97	66.968	ENSPTRG00000007792	PARN	91	79.661	Pan_troglodytes
ENSOMEG00000019555	parn	97	67.421	ENSPANG00000020099	PARN	88	79.661	Papio_anubis
ENSOMEG00000019555	parn	97	73.182	ENSPKIG00000022807	parn	96	69.757	Paramormyrops_kingsleyae
ENSOMEG00000019555	parn	97	64.253	ENSPSIG00000014804	PARN	91	71.966	Pelodiscus_sinensis
ENSOMEG00000019555	parn	97	75.342	ENSPMGG00000014431	parn	83	77.759	Periophthalmus_magnuspinnatus
ENSOMEG00000019555	parn	97	64.384	ENSPEMG00000018439	Parn	91	71.181	Peromyscus_maniculatus_bairdii
ENSOMEG00000019555	parn	97	59.459	ENSPMAG00000003956	parn	99	66.976	Petromyzon_marinus
ENSOMEG00000019555	parn	91	65.385	ENSPCIG00000001259	PARN	91	79.661	Phascolarctos_cinereus
ENSOMEG00000019555	parn	100	81.314	ENSPFOG00000012823	parn	100	80.876	Poecilia_formosa
ENSOMEG00000019555	parn	100	80.876	ENSPLAG00000006395	parn	100	80.876	Poecilia_latipinna
ENSOMEG00000019555	parn	100	81.460	ENSPMEG00000007711	parn	100	81.022	Poecilia_mexicana
ENSOMEG00000019555	parn	100	81.022	ENSPREG00000000147	parn	100	81.022	Poecilia_reticulata
ENSOMEG00000019555	parn	97	66.368	ENSPPYG00000007123	PARN	92	72.128	Pongo_abelii
ENSOMEG00000019555	parn	81	66.310	ENSPCAG00000001741	PARN	91	63.734	Procavia_capensis
ENSOMEG00000019555	parn	97	66.063	ENSPCOG00000019292	PARN	91	77.966	Propithecus_coquereli
ENSOMEG00000019555	parn	94	66.355	ENSPVAG00000002547	PARN	95	67.213	Pteropus_vampyrus
ENSOMEG00000019555	parn	100	80.820	ENSPNYG00000006835	parn	100	80.966	Pundamilia_nyererei
ENSOMEG00000019555	parn	93	68.652	ENSPNAG00000018905	parn	100	68.652	Pygocentrus_nattereri
ENSOMEG00000019555	parn	97	63.636	ENSRNOG00000002912	Parn	96	78.571	Rattus_norvegicus
ENSOMEG00000019555	parn	96	63.761	ENSSBOG00000034726	PARN	88	79.661	Saimiri_boliviensis_boliviensis
ENSOMEG00000019555	parn	95	67.130	ENSSHAG00000008493	PARN	94	78.282	Sarcophilus_harrisii
ENSOMEG00000019555	parn	100	69.010	ENSSFOG00015014165	parn	98	73.658	Scleropages_formosus
ENSOMEG00000019555	parn	100	77.429	ENSSMAG00000000685	parn	100	77.857	Scophthalmus_maximus
ENSOMEG00000019555	parn	100	80.786	ENSSDUG00000014555	parn	100	80.932	Seriola_dumerili
ENSOMEG00000019555	parn	97	78.713	ENSSLDG00000007603	-	100	78.713	Seriola_lalandi_dorsalis
ENSOMEG00000019555	parn	64	78.851	ENSSARG00000014339	PARN	75	78.851	Sorex_araneus
ENSOMEG00000019555	parn	97	67.421	ENSSPUG00000007719	PARN	95	69.821	Sphenodon_punctatus
ENSOMEG00000019555	parn	100	82.482	ENSSPAG00000007095	parn	100	82.482	Stegastes_partitus
ENSOMEG00000019555	parn	100	66.172	ENSSSCG00000007878	PARN	89	66.172	Sus_scrofa
ENSOMEG00000019555	parn	95	66.204	ENSTGUG00000004971	PARN	95	70.695	Taeniopygia_guttata
ENSOMEG00000019555	parn	97	78.182	ENSTNIG00000008252	parn	100	78.537	Tetraodon_nigroviridis
ENSOMEG00000019555	parn	76	61.321	ENSTBEG00000010407	PARN	91	61.321	Tupaia_belangeri
ENSOMEG00000019555	parn	94	66.822	ENSTTRG00000002843	PARN	77	78.029	Tursiops_truncatus
ENSOMEG00000019555	parn	65	68.650	ENSUAMG00000008283	PARN	94	64.989	Ursus_americanus
ENSOMEG00000019555	parn	100	65.926	ENSUMAG00000004527	PARN	100	65.926	Ursus_maritimus
ENSOMEG00000019555	parn	94	66.822	ENSVPAG00000008968	PARN	93	70.191	Vicugna_pacos
ENSOMEG00000019555	parn	97	66.063	ENSVVUG00000019509	PARN	99	66.364	Vulpes_vulpes
ENSOMEG00000019555	parn	97	65.909	ENSXETG00000010994	parn	100	73.962	Xenopus_tropicalis
ENSOMEG00000019555	parn	97	80.455	ENSXCOG00000015990	parn	99	80.776	Xiphophorus_couchianus
ENSOMEG00000019555	parn	100	80.848	ENSXMAG00000014783	parn	100	81.460	Xiphophorus_maculatus