EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000019619 (Gene tree)
Gene ID: 112144262
Gene Symbol: LARP4B
Alias: -
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 89619 bases
Position: chrNVQA01000008.1:2908351-2997969
Accession: 112144262
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000017899	La	PF05383.17	1.3e-12	1	1
ENSOMEP00000033555	La	PF05383.17	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000026775	LARP4B-202	4836	-	ENSOMEP00000033555	760 (aa)	XP_024124470	UPI000CF7F632
ENSOMET00000026738	LARP4B-201	4662	-	ENSOMEP00000017899	702 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000019619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000019619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000019619	LARP4B	76	38.411	ENSOMEG00000019749	larp4aa	72	67.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000019619	LARP4B	100	53.567	ENSG00000107929	LARP4B	100	53.066	Homo_sapiens
ENSOMEG00000019619	LARP4B	100	74.384	ENSAPOG00000020531	LARP4B	95	85.536	Acanthochromis_polyacanthus
ENSOMEG00000019619	LARP4B	92	53.794	ENSAMEG00000001810	LARP4B	100	51.940	Ailuropoda_melanoleuca
ENSOMEG00000019619	LARP4B	98	69.796	ENSAOCG00000007887	-	99	85.536	Amphiprion_ocellaris
ENSOMEG00000019619	LARP4B	94	82.033	ENSAPEG00000002512	LARP4B	96	80.785	Amphiprion_percula
ENSOMEG00000019619	LARP4B	100	81.338	ENSATEG00000012614	LARP4B	100	81.338	Anabas_testudineus
ENSOMEG00000019619	LARP4B	100	56.946	ENSAPLG00000003813	LARP4B	98	56.516	Anas_platyrhynchos
ENSOMEG00000019619	LARP4B	100	58.387	ENSACAG00000002858	LARP4B	100	58.023	Anolis_carolinensis
ENSOMEG00000019619	LARP4B	100	52.816	ENSANAG00000007531	-	100	52.315	Aotus_nancymaae
ENSOMEG00000019619	LARP4B	100	83.380	ENSACLG00000026356	LARP4B	100	83.380	Astatotilapia_calliptera
ENSOMEG00000019619	LARP4B	94	52.639	ENSAMXG00000003335	larp4b	97	52.097	Astyanax_mexicanus
ENSOMEG00000019619	LARP4B	97	55.210	ENSBTAG00000013899	LARP4B	97	54.804	Bos_taurus
ENSOMEG00000019619	LARP4B	100	53.450	ENSCJAG00000018434	LARP4B	100	52.823	Callithrix_jacchus
ENSOMEG00000019619	LARP4B	92	54.558	ENSCAFG00020004209	LARP4B	100	52.551	Canis_lupus_dingo
ENSOMEG00000019619	LARP4B	97	53.876	ENSCHIG00000013543	LARP4B	98	53.080	Capra_hircus
ENSOMEG00000019619	LARP4B	88	58.571	ENSTSYG00000002568	LARP4B	99	58.347	Carlito_syrichta
ENSOMEG00000019619	LARP4B	89	53.750	ENSCAPG00000009725	LARP4B	73	68.831	Cavia_aperea
ENSOMEG00000019619	LARP4B	100	53.325	ENSCPOG00000009375	LARP4B	100	52.513	Cavia_porcellus
ENSOMEG00000019619	LARP4B	100	53.442	ENSCCAG00000024869	LARP4B	100	52.816	Cebus_capucinus
ENSOMEG00000019619	LARP4B	100	53.817	ENSCATG00000019750	LARP4B	100	53.317	Cercocebus_atys
ENSOMEG00000019619	LARP4B	100	54.498	ENSCLAG00000011570	LARP4B	100	53.786	Chinchilla_lanigera
ENSOMEG00000019619	LARP4B	64	75.758	ENSCHOG00000007831	-	59	75.758	Choloepus_hoffmanni
ENSOMEG00000019619	LARP4B	100	58.044	ENSCPBG00000017063	LARP4B	100	57.603	Chrysemys_picta_bellii
ENSOMEG00000019619	LARP4B	100	51.940	ENSCANG00000038021	LARP4B	100	51.439	Colobus_angolensis_palliatus
ENSOMEG00000019619	LARP4B	100	53.777	ENSCGRG00001022930	Larp4b	100	58.916	Cricetulus_griseus_chok1gshd
ENSOMEG00000019619	LARP4B	100	53.777	ENSCGRG00000006022	Larp4b	100	58.916	Cricetulus_griseus_crigri
ENSOMEG00000019619	LARP4B	100	71.089	ENSCSEG00000007342	LARP4B	77	81.548	Cynoglossus_semilaevis
ENSOMEG00000019619	LARP4B	100	80.731	ENSCVAG00000008910	LARP4B	100	80.731	Cyprinodon_variegatus
ENSOMEG00000019619	LARP4B	97	51.969	ENSDARG00000062146	larp4b	98	52.105	Danio_rerio
ENSOMEG00000019619	LARP4B	96	54.348	ENSDNOG00000045543	-	100	59.690	Dasypus_novemcinctus
ENSOMEG00000019619	LARP4B	100	51.125	ENSDORG00000009328	Larp4b	100	50.638	Dipodomys_ordii
ENSOMEG00000019619	LARP4B	88	56.410	ENSETEG00000011249	LARP4B	89	56.410	Echinops_telfairi
ENSOMEG00000019619	LARP4B	91	54.172	ENSEASG00005019068	-	100	52.261	Equus_asinus_asinus
ENSOMEG00000019619	LARP4B	91	54.297	ENSECAG00000024040	LARP4B	100	52.513	Equus_caballus
ENSOMEG00000019619	LARP4B	92	53.794	ENSEEUG00000008391	LARP4B	98	51.580	Erinaceus_europaeus
ENSOMEG00000019619	LARP4B	100	69.860	ENSELUG00000008626	LARP4B	100	70.115	Esox_lucius
ENSOMEG00000019619	LARP4B	88	41.399	ENSELUG00000001417	-	94	41.053	Esox_lucius
ENSOMEG00000019619	LARP4B	92	55.450	ENSFCAG00000000721	-	100	53.576	Felis_catus
ENSOMEG00000019619	LARP4B	100	58.612	ENSFALG00000006961	LARP4B	100	57.915	Ficedula_albicollis
ENSOMEG00000019619	LARP4B	100	54.307	ENSFDAG00000006158	LARP4B	97	53.383	Fukomys_damarensis
ENSOMEG00000019619	LARP4B	100	65.621	ENSFHEG00000013037	LARP4B	100	65.490	Fundulus_heteroclitus
ENSOMEG00000019619	LARP4B	69	74.803	ENSGMOG00000010818	-	83	74.803	Gadus_morhua
ENSOMEG00000019619	LARP4B	100	57.490	ENSGALG00000006672	LARP4B	100	57.033	Gallus_gallus
ENSOMEG00000019619	LARP4B	100	71.623	ENSGACG00000017535	LARP4B	98	71.747	Gasterosteus_aculeatus
ENSOMEG00000019619	LARP4B	94	56.540	ENSGAGG00000008598	LARP4B	100	56.054	Gopherus_agassizii
ENSOMEG00000019619	LARP4B	100	53.442	ENSGGOG00000003572	LARP4B	100	53.066	Gorilla_gorilla
ENSOMEG00000019619	LARP4B	100	84.344	ENSHBUG00000007535	LARP4B	100	84.626	Haplochromis_burtoni
ENSOMEG00000019619	LARP4B	100	54.318	ENSHGLG00000012936	LARP4B	100	60.102	Heterocephalus_glaber_female
ENSOMEG00000019619	LARP4B	87	48.261	ENSHGLG00100017261	-	100	48.926	Heterocephalus_glaber_male
ENSOMEG00000019619	LARP4B	100	54.329	ENSHGLG00100016220	-	100	53.392	Heterocephalus_glaber_male
ENSOMEG00000019619	LARP4B	90	89.286	ENSHCOG00000011581	LARP4B	88	89.286	Hippocampus_comes
ENSOMEG00000019619	LARP4B	94	52.432	ENSIPUG00000009705	larp4b	97	51.757	Ictalurus_punctatus
ENSOMEG00000019619	LARP4B	100	52.020	ENSSTOG00000000587	LARP4B	95	60.136	Ictidomys_tridecemlineatus
ENSOMEG00000019619	LARP4B	100	53.758	ENSJJAG00000020847	Larp4b	100	52.994	Jaculus_jaculus
ENSOMEG00000019619	LARP4B	100	83.357	ENSKMAG00000021674	LARP4B	100	84.062	Kryptolebias_marmoratus
ENSOMEG00000019619	LARP4B	80	81.571	ENSLBEG00000025293	-	82	84.486	Labrus_bergylta
ENSOMEG00000019619	LARP4B	94	56.361	ENSLACG00000009492	LARP4B	100	56.498	Latimeria_chalumnae
ENSOMEG00000019619	LARP4B	100	64.319	ENSLOCG00000012290	larp4b	100	63.171	Lepisosteus_oculatus
ENSOMEG00000019619	LARP4B	100	54.430	ENSLAFG00000015334	LARP4B	100	53.671	Loxodonta_africana
ENSOMEG00000019619	LARP4B	100	53.692	ENSMFAG00000001766	LARP4B	100	51.314	Macaca_fascicularis
ENSOMEG00000019619	LARP4B	100	53.692	ENSMMUG00000005279	LARP4B	100	53.191	Macaca_mulatta
ENSOMEG00000019619	LARP4B	100	53.567	ENSMNEG00000014019	LARP4B	100	51.189	Macaca_nemestrina
ENSOMEG00000019619	LARP4B	100	53.692	ENSMLEG00000035198	LARP4B	100	53.191	Mandrillus_leucophaeus
ENSOMEG00000019619	LARP4B	100	81.558	ENSMAMG00000013742	LARP4B	100	81.429	Mastacembelus_armatus
ENSOMEG00000019619	LARP4B	100	72.702	ENSMZEG00005006498	-	95	87.947	Maylandia_zebra
ENSOMEG00000019619	LARP4B	94	82.548	ENSMZEG00005014594	-	100	82.548	Maylandia_zebra
ENSOMEG00000019619	LARP4B	100	55.569	ENSMGAG00000005472	LARP4B	100	55.306	Meleagris_gallopavo
ENSOMEG00000019619	LARP4B	100	52.802	ENSMAUG00000021657	Larp4b	100	58.824	Mesocricetus_auratus
ENSOMEG00000019619	LARP4B	100	54.993	ENSMICG00000001301	LARP4B	100	54.727	Microcebus_murinus
ENSOMEG00000019619	LARP4B	87	58.516	ENSMOCG00000021452	Larp4b	100	58.179	Microtus_ochrogaster
ENSOMEG00000019619	LARP4B	86	93.103	ENSMMOG00000011253	-	100	68.245	Mola_mola
ENSOMEG00000019619	LARP4B	100	55.019	ENSMODG00000005957	LARP4B	100	54.695	Monodelphis_domestica
ENSOMEG00000019619	LARP4B	100	68.091	ENSMALG00000012432	LARP4B	100	68.234	Monopterus_albus
ENSOMEG00000019619	LARP4B	100	53.875	MGP_CAROLIEiJ_G0018216	Larp4b	100	59.201	Mus_caroli
ENSOMEG00000019619	LARP4B	100	54.373	ENSMUSG00000033499	Larp4b	100	58.997	Mus_musculus
ENSOMEG00000019619	LARP4B	100	54.464	MGP_PahariEiJ_G0019266	Larp4b	100	59.756	Mus_pahari
ENSOMEG00000019619	LARP4B	100	54.246	MGP_SPRETEiJ_G0019074	Larp4b	100	58.997	Mus_spretus
ENSOMEG00000019619	LARP4B	92	54.508	ENSMPUG00000016220	LARP4B	97	52.453	Mustela_putorius_furo
ENSOMEG00000019619	LARP4B	89	55.394	ENSMLUG00000005880	LARP4B	99	53.379	Myotis_lucifugus
ENSOMEG00000019619	LARP4B	100	54.648	ENSNGAG00000001750	Larp4b	100	54.523	Nannospalax_galili
ENSOMEG00000019619	LARP4B	100	66.156	ENSNBRG00000020018	LARP4B	100	65.877	Neolamprologus_brichardi
ENSOMEG00000019619	LARP4B	100	53.567	ENSNLEG00000013442	LARP4B	100	53.066	Nomascus_leucogenys
ENSOMEG00000019619	LARP4B	77	75.000	ENSMEUG00000013114	-	83	44.867	Notamacropus_eugenii
ENSOMEG00000019619	LARP4B	100	51.308	ENSOPRG00000003300	LARP4B	100	50.748	Ochotona_princeps
ENSOMEG00000019619	LARP4B	100	49.938	ENSODEG00000001109	LARP4B	100	54.855	Octodon_degus
ENSOMEG00000019619	LARP4B	100	82.558	ENSONIG00000017705	LARP4B	100	82.817	Oreochromis_niloticus
ENSOMEG00000019619	LARP4B	100	54.388	ENSOANG00000006100	LARP4B	100	54.198	Ornithorhynchus_anatinus
ENSOMEG00000019619	LARP4B	100	51.829	ENSOCUG00000004950	LARP4B	97	51.098	Oryctolagus_cuniculus
ENSOMEG00000019619	LARP4B	100	93.824	ENSORLG00000006080	LARP4B	100	93.561	Oryzias_latipes
ENSOMEG00000019619	LARP4B	100	93.466	ENSORLG00020020940	LARP4B	100	93.324	Oryzias_latipes_hni
ENSOMEG00000019619	LARP4B	100	93.875	ENSORLG00015020608	LARP4B	100	93.590	Oryzias_latipes_hsok
ENSOMEG00000019619	LARP4B	96	53.206	ENSOGAG00000011540	LARP4B	99	53.070	Otolemur_garnettii
ENSOMEG00000019619	LARP4B	97	53.665	ENSOARG00000015320	LARP4B	96	52.872	Ovis_aries
ENSOMEG00000019619	LARP4B	100	53.692	ENSPPAG00000039232	LARP4B	100	53.191	Pan_paniscus
ENSOMEG00000019619	LARP4B	92	55.586	ENSPPRG00000009489	LARP4B	100	53.325	Panthera_pardus
ENSOMEG00000019619	LARP4B	92	55.586	ENSPTIG00000008543	LARP4B	100	53.325	Panthera_tigris_altaica
ENSOMEG00000019619	LARP4B	100	53.692	ENSPTRG00000002235	LARP4B	100	53.191	Pan_troglodytes
ENSOMEG00000019619	LARP4B	100	53.692	ENSPANG00000023546	LARP4B	100	51.314	Papio_anubis
ENSOMEG00000019619	LARP4B	98	57.874	ENSPKIG00000012368	LARP4B	96	58.047	Paramormyrops_kingsleyae
ENSOMEG00000019619	LARP4B	72	67.290	ENSPSIG00000005600	LARP4B	99	66.757	Pelodiscus_sinensis
ENSOMEG00000019619	LARP4B	84	72.661	ENSPMGG00000008261	LARP4B	87	72.477	Periophthalmus_magnuspinnatus
ENSOMEG00000019619	LARP4B	100	53.758	ENSPEMG00000014052	Larp4b	100	53.248	Peromyscus_maniculatus_bairdii
ENSOMEG00000019619	LARP4B	100	85.057	ENSPFOG00000000029	LARP4B	100	79.690	Poecilia_formosa
ENSOMEG00000019619	LARP4B	100	85.057	ENSPLAG00000002871	LARP4B	100	79.922	Poecilia_latipinna
ENSOMEG00000019619	LARP4B	100	85.057	ENSPMEG00000016361	LARP4B	100	80.307	Poecilia_mexicana
ENSOMEG00000019619	LARP4B	100	53.509	ENSPPYG00000002035	LARP4B	97	53.008	Pongo_abelii
ENSOMEG00000019619	LARP4B	100	53.101	ENSPCOG00000014688	LARP4B	100	52.842	Propithecus_coquereli
ENSOMEG00000019619	LARP4B	88	53.165	ENSPVAG00000009784	LARP4B	82	52.607	Pteropus_vampyrus
ENSOMEG00000019619	LARP4B	100	83.520	ENSPNYG00000024252	LARP4B	100	83.799	Pundamilia_nyererei
ENSOMEG00000019619	LARP4B	94	52.755	ENSPNAG00000028956	larp4b	96	51.918	Pygocentrus_nattereri
ENSOMEG00000019619	LARP4B	99	53.121	ENSRNOG00000015888	Larp4b	100	52.806	Rattus_norvegicus
ENSOMEG00000019619	LARP4B	100	53.317	ENSRBIG00000033294	LARP4B	100	53.317	Rhinopithecus_bieti
ENSOMEG00000019619	LARP4B	100	53.442	ENSRROG00000033879	LARP4B	100	53.442	Rhinopithecus_roxellana
ENSOMEG00000019619	LARP4B	100	48.808	ENSSBOG00000021109	LARP4B	100	48.181	Saimiri_boliviensis_boliviensis
ENSOMEG00000019619	LARP4B	100	56.410	ENSSHAG00000013392	LARP4B	100	55.852	Sarcophilus_harrisii
ENSOMEG00000019619	LARP4B	93	59.671	ENSSFOG00015003256	LARP4B	93	57.888	Scleropages_formosus
ENSOMEG00000019619	LARP4B	100	71.166	ENSSMAG00000005982	-	100	75.000	Scophthalmus_maximus
ENSOMEG00000019619	LARP4B	100	85.634	ENSSDUG00000006704	LARP4B	100	85.352	Seriola_dumerili
ENSOMEG00000019619	LARP4B	100	73.398	ENSSLDG00000020660	LARP4B	97	80.000	Seriola_lalandi_dorsalis
ENSOMEG00000019619	LARP4B	70	86.735	ENSSARG00000001243	-	77	86.735	Sorex_araneus
ENSOMEG00000019619	LARP4B	100	60.669	ENSSPUG00000002102	-	100	60.251	Sphenodon_punctatus
ENSOMEG00000019619	LARP4B	100	58.136	ENSSPUG00000013734	-	100	60.095	Sphenodon_punctatus
ENSOMEG00000019619	LARP4B	91	80.420	ENSSPAG00000014628	LARP4B	92	89.655	Stegastes_partitus
ENSOMEG00000019619	LARP4B	100	53.718	ENSSSCG00000011162	LARP4B	100	53.462	Sus_scrofa
ENSOMEG00000019619	LARP4B	100	57.526	ENSTGUG00000000811	-	100	56.833	Taeniopygia_guttata
ENSOMEG00000019619	LARP4B	99	65.212	ENSTNIG00000007991	LARP4B	100	70.793	Tetraodon_nigroviridis
ENSOMEG00000019619	LARP4B	100	66.624	ENSTNIG00000004571	-	98	66.964	Tetraodon_nigroviridis
ENSOMEG00000019619	LARP4B	77	56.480	ENSTTRG00000011151	LARP4B	87	57.631	Tursiops_truncatus
ENSOMEG00000019619	LARP4B	86	55.347	ENSUAMG00000016461	LARP4B	95	54.867	Ursus_americanus
ENSOMEG00000019619	LARP4B	92	54.681	ENSUMAG00000016127	LARP4B	100	52.816	Ursus_maritimus
ENSOMEG00000019619	LARP4B	92	54.410	ENSVVUG00000008641	LARP4B	100	52.321	Vulpes_vulpes
ENSOMEG00000019619	LARP4B	99	58.612	ENSXETG00000016882	larp4b	100	58.355	Xenopus_tropicalis
ENSOMEG00000019619	LARP4B	100	69.169	ENSXCOG00000019952	LARP4B	100	69.169	Xiphophorus_couchianus
ENSOMEG00000019619	LARP4B	100	80.450	ENSXMAG00000021533	LARP4B	100	80.309	Xiphophorus_maculatus