EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000019702 (Gene tree)
Gene ID: 112154567
Gene Symbol: -
Alias: -
Full Name: prolyl 4-hydroxylase subunit alpha-1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 17355 bases
Position: chrNVQA01000018.1:19809375-19826729
Accession: 112154567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000033562	2OG-FeII_Oxy	PF03171.20	2.1e-07	1	1
ENSOMEP00000017972	2OG-FeII_Oxy	PF03171.20	4.2e-05	1	1
ENSOMEP00000018005	2OG-FeII_Oxy	PF03171.20	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000026780	-	2846	-	ENSOMEP00000033562	530 (aa)	XP_024141371	UPI000CF83A26
ENSOMET00000035069	-	3044	-	ENSOMEP00000018005	531 (aa)	-	-
ENSOMET00000026847	-	3022	-	ENSOMEP00000017972	531 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000019702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000019702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000019702	-	96	69.905	ENSOMEG00000009962	p4ha1b	99	69.316
ENSOMEG00000019702	-	99	63.227	ENSOMEG00000004357	p4ha2	99	63.227

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000019702	-	82	60.731	ENSAPOG00000008101	p4ha1a	91	60.731	Acanthochromis_polyacanthus
ENSOMEG00000019702	-	97	78.988	ENSACIG00000014303	p4ha1a	99	76.792	Amphilophus_citrinellus
ENSOMEG00000019702	-	99	78.868	ENSAOCG00000005514	-	99	78.868	Amphiprion_ocellaris
ENSOMEG00000019702	-	99	69.057	ENSAOCG00000005531	p4ha1a	99	69.057	Amphiprion_ocellaris
ENSOMEG00000019702	-	99	78.868	ENSAPEG00000010462	-	99	78.868	Amphiprion_percula
ENSOMEG00000019702	-	99	72.201	ENSAMXG00000018364	p4ha1a	99	72.201	Astyanax_mexicanus
ENSOMEG00000019702	-	97	76.550	ENSCSEG00000001857	-	97	79.322	Cynoglossus_semilaevis
ENSOMEG00000019702	-	99	76.548	ENSCVAG00000020081	p4ha1a	99	76.548	Cyprinodon_variegatus
ENSOMEG00000019702	-	99	72.897	ENSDARG00000033537	p4ha1a	98	73.171	Danio_rerio
ENSOMEG00000019702	-	99	71.667	ENSELUG00000005174	p4ha1a	99	71.667	Esox_lucius
ENSOMEG00000019702	-	99	77.154	ENSMAMG00000010119	p4ha1a	99	77.154	Mastacembelus_armatus
ENSOMEG00000019702	-	96	76.969	ENSMMOG00000009210	-	95	76.969	Mola_mola
ENSOMEG00000019702	-	99	76.994	ENSMALG00000013083	-	99	80.068	Monopterus_albus
ENSOMEG00000019702	-	100	88.324	ENSORLG00000014906	-	92	90.838	Oryzias_latipes
ENSOMEG00000019702	-	99	92.264	ENSORLG00020015227	-	97	92.264	Oryzias_latipes_hni
ENSOMEG00000019702	-	99	92.264	ENSORLG00015012970	-	97	92.264	Oryzias_latipes_hsok
ENSOMEG00000019702	-	98	72.519	ENSPKIG00000002519	p4ha1a	97	72.519	Paramormyrops_kingsleyae
ENSOMEG00000019702	-	99	76.692	ENSPREG00000016136	p4ha1a	98	76.880	Poecilia_reticulata
ENSOMEG00000019702	-	99	74.436	ENSPNAG00000025732	p4ha1a	98	74.624	Pygocentrus_nattereri
ENSOMEG00000019702	-	96	71.705	ENSSFOG00015009731	p4ha1	99	70.169	Scleropages_formosus
ENSOMEG00000019702	-	99	73.004	ENSTNIG00000003570	-	99	73.004	Tetraodon_nigroviridis