EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000019820 (Gene tree)
Gene ID: 112157742
Gene Symbol: xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 57120 bases
Position: chrNVQA01000023.1:8428596-8485715
Accession: 112157742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000018106	XRN_N	PF03159.18	3.3e-101	1	1
ENSOMEP00000033680	XRN_N	PF03159.18	6.7e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000026997	-	5061	-	ENSOMEP00000018106	977 (aa)	XP_024146470	UPI000CF7D0FF
ENSOMET00000027033	-	5126	-	ENSOMEP00000033680	1082 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000019820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000019820's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000019820	xrn2	100	69.543	ENSG00000088930	XRN2	90	73.988	Homo_sapiens
ENSOMEG00000019820	xrn2	96	84.648	ENSAPOG00000009818	xrn2	96	84.884	Acanthochromis_polyacanthus
ENSOMEG00000019820	xrn2	100	69.239	ENSAMEG00000012581	XRN2	90	74.104	Ailuropoda_melanoleuca
ENSOMEG00000019820	xrn2	89	81.623	ENSACIG00000015047	xrn2	95	86.641	Amphilophus_citrinellus
ENSOMEG00000019820	xrn2	100	85.525	ENSAOCG00000023632	xrn2	100	85.656	Amphiprion_ocellaris
ENSOMEG00000019820	xrn2	100	85.423	ENSAPEG00000014871	xrn2	100	85.831	Amphiprion_percula
ENSOMEG00000019820	xrn2	98	85.089	ENSATEG00000001273	xrn2	98	85.443	Anabas_testudineus
ENSOMEG00000019820	xrn2	98	69.062	ENSAPLG00000013869	XRN2	90	74.167	Anas_platyrhynchos
ENSOMEG00000019820	xrn2	100	70.101	ENSACAG00000005565	XRN2	89	75.173	Anolis_carolinensis
ENSOMEG00000019820	xrn2	100	69.340	ENSANAG00000020126	XRN2	90	74.220	Aotus_nancymaae
ENSOMEG00000019820	xrn2	89	85.714	ENSACLG00000010522	xrn2	98	85.714	Astatotilapia_calliptera
ENSOMEG00000019820	xrn2	100	78.283	ENSAMXG00000018301	xrn2	100	76.517	Astyanax_mexicanus
ENSOMEG00000019820	xrn2	100	69.574	ENSBTAG00000011304	XRN2	90	73.903	Bos_taurus
ENSOMEG00000019820	xrn2	85	54.108	WBGene00006964	xrn-2	90	53.160	Caenorhabditis_elegans
ENSOMEG00000019820	xrn2	100	69.442	ENSCJAG00000005611	XRN2	90	74.104	Callithrix_jacchus
ENSOMEG00000019820	xrn2	100	69.340	ENSCAFG00000005185	XRN2	90	74.220	Canis_familiaris
ENSOMEG00000019820	xrn2	100	69.340	ENSCAFG00020027479	XRN2	90	74.220	Canis_lupus_dingo
ENSOMEG00000019820	xrn2	100	69.473	ENSCHIG00000006921	XRN2	90	73.788	Capra_hircus
ENSOMEG00000019820	xrn2	100	69.340	ENSTSYG00000008315	XRN2	90	73.988	Carlito_syrichta
ENSOMEG00000019820	xrn2	97	59.770	ENSCAPG00000010773	XRN2	88	63.853	Cavia_aperea
ENSOMEG00000019820	xrn2	100	69.746	ENSCPOG00000009407	XRN2	90	74.827	Cavia_porcellus
ENSOMEG00000019820	xrn2	100	69.239	ENSCATG00000040350	XRN2	90	73.988	Cercocebus_atys
ENSOMEG00000019820	xrn2	100	69.746	ENSCLAG00000013419	XRN2	90	74.335	Chinchilla_lanigera
ENSOMEG00000019820	xrn2	100	69.239	ENSCSAG00000011094	XRN2	90	73.988	Chlorocebus_sabaeus
ENSOMEG00000019820	xrn2	60	87.634	ENSCHOG00000013404	XRN2	63	87.634	Choloepus_hoffmanni
ENSOMEG00000019820	xrn2	100	70.517	ENSCPBG00000023533	XRN2	100	69.534	Chrysemys_picta_bellii
ENSOMEG00000019820	xrn2	85	59.338	ENSCING00000022336	-	100	60.495	Ciona_intestinalis
ENSOMEG00000019820	xrn2	80	69.767	ENSCSAVG00000011217	-	93	70.602	Ciona_savignyi
ENSOMEG00000019820	xrn2	100	69.239	ENSCANG00000040240	XRN2	90	73.988	Colobus_angolensis_palliatus
ENSOMEG00000019820	xrn2	96	70.179	ENSCGRG00001010676	Xrn2	91	74.596	Cricetulus_griseus_chok1gshd
ENSOMEG00000019820	xrn2	97	68.333	ENSCGRG00000006378	Xrn2	89	73.960	Cricetulus_griseus_crigri
ENSOMEG00000019820	xrn2	53	79.079	ENSCSEG00000005628	xrn2	100	79.079	Cynoglossus_semilaevis
ENSOMEG00000019820	xrn2	89	83.805	ENSCVAG00000018999	xrn2	98	91.396	Cyprinodon_variegatus
ENSOMEG00000019820	xrn2	100	76.056	ENSDARG00000101900	xrn2	96	84.542	Danio_rerio
ENSOMEG00000019820	xrn2	100	69.239	ENSDNOG00000001895	XRN2	90	73.988	Dasypus_novemcinctus
ENSOMEG00000019820	xrn2	100	68.384	ENSDORG00000005434	Xrn2	89	73.179	Dipodomys_ordii
ENSOMEG00000019820	xrn2	85	54.970	FBgn0031868	Rat1	91	54.545	Drosophila_melanogaster
ENSOMEG00000019820	xrn2	91	80.779	ENSETEG00000001740	XRN2	81	80.779	Echinops_telfairi
ENSOMEG00000019820	xrn2	83	69.175	ENSEBUG00000016136	xrn2	100	68.932	Eptatretus_burgeri
ENSOMEG00000019820	xrn2	100	69.340	ENSEASG00005002484	XRN2	97	69.726	Equus_asinus_asinus
ENSOMEG00000019820	xrn2	94	92.308	ENSECAG00000018988	XRN2	94	92.308	Equus_caballus
ENSOMEG00000019820	xrn2	66	96.000	ENSEEUG00000009265	XRN2	67	96.000	Erinaceus_europaeus
ENSOMEG00000019820	xrn2	100	78.521	ENSELUG00000000552	xrn2	95	80.876	Esox_lucius
ENSOMEG00000019820	xrn2	100	69.442	ENSFCAG00000007970	XRN2	90	73.988	Felis_catus
ENSOMEG00000019820	xrn2	100	69.898	ENSFALG00000004508	XRN2	89	75.000	Ficedula_albicollis
ENSOMEG00000019820	xrn2	100	69.645	ENSFDAG00000016311	XRN2	90	74.104	Fukomys_damarensis
ENSOMEG00000019820	xrn2	53	82.567	ENSFHEG00000013039	xrn2	98	82.567	Fundulus_heteroclitus
ENSOMEG00000019820	xrn2	85	78.992	ENSGMOG00000013436	xrn2	100	78.992	Gadus_morhua
ENSOMEG00000019820	xrn2	100	69.270	ENSGALG00000008372	XRN2	90	74.190	Gallus_gallus
ENSOMEG00000019820	xrn2	89	86.191	ENSGAFG00000014284	xrn2	99	86.191	Gambusia_affinis
ENSOMEG00000019820	xrn2	86	82.045	ENSGACG00000011870	xrn2	96	87.716	Gasterosteus_aculeatus
ENSOMEG00000019820	xrn2	100	70.517	ENSGAGG00000004884	XRN2	100	70.040	Gopherus_agassizii
ENSOMEG00000019820	xrn2	100	69.543	ENSGGOG00000013738	XRN2	90	73.988	Gorilla_gorilla
ENSOMEG00000019820	xrn2	53	87.165	ENSHBUG00000005077	xrn2	94	87.165	Haplochromis_burtoni
ENSOMEG00000019820	xrn2	100	68.864	ENSHGLG00000014831	XRN2	90	73.326	Heterocephalus_glaber_female
ENSOMEG00000019820	xrn2	100	68.864	ENSHGLG00100013130	XRN2	90	73.326	Heterocephalus_glaber_male
ENSOMEG00000019820	xrn2	99	79.289	ENSHCOG00000011994	xrn2	97	79.832	Hippocampus_comes
ENSOMEG00000019820	xrn2	100	77.016	ENSIPUG00000006639	xrn2	98	77.847	Ictalurus_punctatus
ENSOMEG00000019820	xrn2	100	69.036	ENSSTOG00000000589	XRN2	90	73.873	Ictidomys_tridecemlineatus
ENSOMEG00000019820	xrn2	100	69.857	ENSJJAG00000022128	Xrn2	90	74.682	Jaculus_jaculus
ENSOMEG00000019820	xrn2	53	86.372	ENSLBEG00000010041	xrn2	100	85.797	Labrus_bergylta
ENSOMEG00000019820	xrn2	93	71.957	ENSLACG00000008307	XRN2	99	74.484	Latimeria_chalumnae
ENSOMEG00000019820	xrn2	99	72.312	ENSLOCG00000016874	xrn2	93	80.755	Lepisosteus_oculatus
ENSOMEG00000019820	xrn2	100	69.675	ENSLAFG00000014624	XRN2	90	74.480	Loxodonta_africana
ENSOMEG00000019820	xrn2	100	69.239	ENSMFAG00000038122	XRN2	90	73.988	Macaca_fascicularis
ENSOMEG00000019820	xrn2	100	69.239	ENSMMUG00000011405	XRN2	90	73.988	Macaca_mulatta
ENSOMEG00000019820	xrn2	100	69.340	ENSMNEG00000040626	XRN2	90	74.104	Macaca_nemestrina
ENSOMEG00000019820	xrn2	100	69.239	ENSMLEG00000041897	XRN2	90	73.988	Mandrillus_leucophaeus
ENSOMEG00000019820	xrn2	94	85.993	ENSMAMG00000008633	xrn2	97	85.624	Mastacembelus_armatus
ENSOMEG00000019820	xrn2	89	87.558	ENSMZEG00005022362	xrn2	98	87.558	Maylandia_zebra
ENSOMEG00000019820	xrn2	99	68.049	ENSMGAG00000003196	XRN2	90	73.733	Meleagris_gallopavo
ENSOMEG00000019820	xrn2	100	69.645	ENSMAUG00000021842	Xrn2	97	69.758	Mesocricetus_auratus
ENSOMEG00000019820	xrn2	100	69.442	ENSMICG00000008126	XRN2	90	74.335	Microcebus_murinus
ENSOMEG00000019820	xrn2	100	69.137	ENSMOCG00000012588	Xrn2	98	68.247	Microtus_ochrogaster
ENSOMEG00000019820	xrn2	89	84.886	ENSMMOG00000017576	xrn2	97	84.886	Mola_mola
ENSOMEG00000019820	xrn2	100	70.183	ENSMODG00000006163	XRN2	100	69.654	Monodelphis_domestica
ENSOMEG00000019820	xrn2	96	85.887	ENSMALG00000011355	xrn2	95	89.827	Monopterus_albus
ENSOMEG00000019820	xrn2	100	69.504	MGP_CAROLIEiJ_G0024400	Xrn2	97	69.895	Mus_caroli
ENSOMEG00000019820	xrn2	100	69.402	ENSMUSG00000027433	Xrn2	97	69.789	Mus_musculus
ENSOMEG00000019820	xrn2	100	69.301	MGP_PahariEiJ_G0025843	Xrn2	97	69.684	Mus_pahari
ENSOMEG00000019820	xrn2	100	69.402	MGP_SPRETEiJ_G0025318	Xrn2	94	84.848	Mus_spretus
ENSOMEG00000019820	xrn2	100	68.064	ENSMPUG00000001198	XRN2	84	72.676	Mustela_putorius_furo
ENSOMEG00000019820	xrn2	100	69.207	ENSMLUG00000001536	XRN2	90	74.074	Myotis_lucifugus
ENSOMEG00000019820	xrn2	100	69.614	ENSNGAG00000018138	Xrn2	97	70.285	Nannospalax_galili
ENSOMEG00000019820	xrn2	89	87.558	ENSNBRG00000008062	xrn2	98	87.558	Neolamprologus_brichardi
ENSOMEG00000019820	xrn2	100	69.239	ENSNLEG00000009991	XRN2	90	73.988	Nomascus_leucogenys
ENSOMEG00000019820	xrn2	66	86.667	ENSMEUG00000008622	-	53	86.667	Notamacropus_eugenii
ENSOMEG00000019820	xrn2	60	71.579	ENSOPRG00000001397	-	63	71.579	Ochotona_princeps
ENSOMEG00000019820	xrn2	96	63.064	ENSODEG00000000860	-	91	67.609	Octodon_degus
ENSOMEG00000019820	xrn2	100	69.543	ENSODEG00000010745	-	90	74.104	Octodon_degus
ENSOMEG00000019820	xrn2	100	82.038	ENSONIG00000018720	xrn2	97	81.283	Oreochromis_niloticus
ENSOMEG00000019820	xrn2	100	70.031	ENSOANG00000015673	XRN2	97	70.316	Ornithorhynchus_anatinus
ENSOMEG00000019820	xrn2	100	69.340	ENSOCUG00000013468	XRN2	90	74.335	Oryctolagus_cuniculus
ENSOMEG00000019820	xrn2	98	93.424	ENSORLG00000017213	xrn2	97	95.853	Oryzias_latipes
ENSOMEG00000019820	xrn2	98	93.319	ENSORLG00020001824	xrn2	98	92.895	Oryzias_latipes_hni
ENSOMEG00000019820	xrn2	98	92.797	ENSORLG00015019747	xrn2	98	92.365	Oryzias_latipes_hsok
ENSOMEG00000019820	xrn2	100	69.645	ENSOGAG00000001068	XRN2	90	73.988	Otolemur_garnettii
ENSOMEG00000019820	xrn2	97	68.854	ENSOARG00000004443	XRN2	89	73.214	Ovis_aries
ENSOMEG00000019820	xrn2	100	69.543	ENSPPAG00000033549	XRN2	90	73.988	Pan_paniscus
ENSOMEG00000019820	xrn2	100	69.442	ENSPPRG00000008732	XRN2	90	73.988	Panthera_pardus
ENSOMEG00000019820	xrn2	97	68.295	ENSPTIG00000015683	XRN2	87	73.421	Panthera_tigris_altaica
ENSOMEG00000019820	xrn2	100	69.543	ENSPTRG00000013308	XRN2	90	73.988	Pan_troglodytes
ENSOMEG00000019820	xrn2	100	69.239	ENSPANG00000018088	XRN2	90	73.988	Papio_anubis
ENSOMEG00000019820	xrn2	100	76.447	ENSPKIG00000016889	xrn2	96	78.480	Paramormyrops_kingsleyae
ENSOMEG00000019820	xrn2	79	75.866	ENSPSIG00000014666	XRN2	100	75.481	Pelodiscus_sinensis
ENSOMEG00000019820	xrn2	100	69.036	ENSPEMG00000000111	Xrn2	90	74.134	Peromyscus_maniculatus_bairdii
ENSOMEG00000019820	xrn2	100	81.391	ENSPFOG00000004182	xrn2	97	82.415	Poecilia_formosa
ENSOMEG00000019820	xrn2	89	85.714	ENSPLAG00000007351	xrn2	98	85.714	Poecilia_latipinna
ENSOMEG00000019820	xrn2	94	80.519	ENSPMEG00000011798	xrn2	97	81.573	Poecilia_mexicana
ENSOMEG00000019820	xrn2	89	86.369	ENSPREG00000012452	xrn2	98	86.369	Poecilia_reticulata
ENSOMEG00000019820	xrn2	100	69.340	ENSPPYG00000010755	XRN2	90	73.757	Pongo_abelii
ENSOMEG00000019820	xrn2	100	65.486	ENSPCAG00000011191	XRN2	90	69.700	Procavia_capensis
ENSOMEG00000019820	xrn2	100	63.553	ENSPCOG00000016468	XRN2	89	67.630	Propithecus_coquereli
ENSOMEG00000019820	xrn2	93	65.780	ENSPVAG00000004596	XRN2	82	65.780	Pteropus_vampyrus
ENSOMEG00000019820	xrn2	89	85.714	ENSPNYG00000001765	xrn2	98	85.714	Pundamilia_nyererei
ENSOMEG00000019820	xrn2	100	77.543	ENSPNAG00000010956	xrn2	97	77.105	Pygocentrus_nattereri
ENSOMEG00000019820	xrn2	100	69.340	ENSRNOG00000011785	Xrn2	90	75.058	Rattus_norvegicus
ENSOMEG00000019820	xrn2	85	75.812	ENSRBIG00000036193	XRN2	100	75.451	Rhinopithecus_bieti
ENSOMEG00000019820	xrn2	100	69.028	ENSRROG00000044400	XRN2	81	73.988	Rhinopithecus_roxellana
ENSOMEG00000019820	xrn2	90	51.198	YOR048C	RAT1	79	53.623	Saccharomyces_cerevisiae
ENSOMEG00000019820	xrn2	100	69.442	ENSSBOG00000021014	XRN2	90	74.335	Saimiri_boliviensis_boliviensis
ENSOMEG00000019820	xrn2	100	76.697	ENSSFOG00015001091	xrn2	99	78.082	Scleropages_formosus
ENSOMEG00000019820	xrn2	90	84.938	ENSSMAG00000007834	xrn2	96	82.719	Scophthalmus_maximus
ENSOMEG00000019820	xrn2	89	86.927	ENSSDUG00000012802	xrn2	99	86.689	Seriola_dumerili
ENSOMEG00000019820	xrn2	91	88.976	ENSSLDG00000021273	xrn2	99	89.408	Seriola_lalandi_dorsalis
ENSOMEG00000019820	xrn2	68	96.000	ENSSARG00000005859	-	54	96.000	Sorex_araneus
ENSOMEG00000019820	xrn2	97	68.875	ENSSPUG00000005485	XRN2	95	68.565	Sphenodon_punctatus
ENSOMEG00000019820	xrn2	100	84.270	ENSSPAG00000016027	xrn2	97	85.805	Stegastes_partitus
ENSOMEG00000019820	xrn2	100	67.915	ENSSSCG00000007109	XRN2	97	67.937	Sus_scrofa
ENSOMEG00000019820	xrn2	100	68.528	ENSTGUG00000007535	XRN2	89	73.898	Taeniopygia_guttata
ENSOMEG00000019820	xrn2	100	79.397	ENSTRUG00000015489	xrn2	96	80.335	Takifugu_rubripes
ENSOMEG00000019820	xrn2	100	76.602	ENSTNIG00000010712	xrn2	91	82.045	Tetraodon_nigroviridis
ENSOMEG00000019820	xrn2	100	68.801	ENSTBEG00000004119	XRN2	90	73.988	Tupaia_belangeri
ENSOMEG00000019820	xrn2	93	77.993	ENSTTRG00000009087	XRN2	83	77.641	Tursiops_truncatus
ENSOMEG00000019820	xrn2	100	69.340	ENSUAMG00000024634	XRN2	94	85.888	Ursus_americanus
ENSOMEG00000019820	xrn2	97	68.613	ENSUMAG00000004012	XRN2	85	73.540	Ursus_maritimus
ENSOMEG00000019820	xrn2	82	83.819	ENSVPAG00000010694	XRN2	73	83.819	Vicugna_pacos
ENSOMEG00000019820	xrn2	100	69.340	ENSVVUG00000012178	XRN2	90	74.220	Vulpes_vulpes
ENSOMEG00000019820	xrn2	100	70.355	ENSXETG00000023501	xrn2	90	77.130	Xenopus_tropicalis
ENSOMEG00000019820	xrn2	100	81.288	ENSXMAG00000000242	xrn2	92	89.051	Xiphophorus_maculatus