EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000019834 (Gene tree)
Gene ID: 112144715
Gene Symbol: POC1A
Alias: -
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 46068 bases
Position: chrNVQA01000009.1:11556455-11602522
Accession: 112144715
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000018111	eIF2A	PF08662.11	3.1e-10	1	1
ENSOMEP00000018136	eIF2A	PF08662.11	3.5e-10	1	1
ENSOMEP00000018091	eIF2A	PF08662.11	4.2e-10	1	1
ENSOMEP00000018121	eIF2A	PF08662.11	4.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000035118	POC1A-204	2788	-	ENSOMEP00000018136	451 (aa)	XP_024125181	UPI000CF8342C
ENSOMET00000026990	POC1A-201	4574	-	ENSOMEP00000018091	472 (aa)	XP_024125178	UPI000CF8124D
ENSOMET00000027009	POC1A-202	1778	XM_024269414	ENSOMEP00000018111	447 (aa)	XP_024125182	UPI000CF827E3
ENSOMET00000027032	POC1A-203	3343	-	ENSOMEP00000018121	467 (aa)	XP_024125179	UPI000CF7E6A1

Gene Model

Click here to download ENSOMEG00000019834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000019834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000019834	POC1A	66	30.457	ENSOMEG00000020941	prpf4	56	30.457
ENSOMEG00000019834	POC1A	65	33.333	ENSOMEG00000005028	wdr61	94	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000019834	POC1A	98	70.303	ENSG00000164087	POC1A	98	70.303	Homo_sapiens
ENSOMEG00000019834	POC1A	99	83.761	ENSAPOG00000002677	POC1A	99	86.765	Acanthochromis_polyacanthus
ENSOMEG00000019834	POC1A	97	59.692	ENSAMEG00000009136	POC1A	97	59.251	Ailuropoda_melanoleuca
ENSOMEG00000019834	POC1A	99	72.222	ENSACIG00000018288	poc1a	99	72.258	Amphilophus_citrinellus
ENSOMEG00000019834	POC1A	99	83.547	ENSAOCG00000001066	POC1A	98	85.797	Amphiprion_ocellaris
ENSOMEG00000019834	POC1A	72	94.118	ENSAPEG00000005795	poc1a	99	94.118	Amphiprion_percula
ENSOMEG00000019834	POC1A	97	60.044	ENSAPLG00000007756	POC1A	98	60.044	Anas_platyrhynchos
ENSOMEG00000019834	POC1A	98	67.857	ENSANAG00000030897	POC1A	96	88.462	Aotus_nancymaae
ENSOMEG00000019834	POC1A	99	80.426	ENSACLG00000017869	POC1A	99	84.884	Astatotilapia_calliptera
ENSOMEG00000019834	POC1A	65	78.694	ENSAMXG00000024703	poc1a	83	78.966	Astyanax_mexicanus
ENSOMEG00000019834	POC1A	96	69.592	ENSBTAG00000001471	POC1A	97	69.592	Bos_taurus
ENSOMEG00000019834	POC1A	98	69.394	ENSCJAG00000005972	POC1A	97	88.462	Callithrix_jacchus
ENSOMEG00000019834	POC1A	97	56.264	ENSCAFG00020022379	POC1A	98	56.264	Canis_lupus_dingo
ENSOMEG00000019834	POC1A	81	74.468	ENSCHIG00000002571	POC1A	97	61.283	Capra_hircus
ENSOMEG00000019834	POC1A	75	88.462	ENSTSYG00000008302	POC1A	95	88.462	Carlito_syrichta
ENSOMEG00000019834	POC1A	66	75.379	ENSCAPG00000016201	POC1A	69	75.379	Cavia_aperea
ENSOMEG00000019834	POC1A	72	88.462	ENSCPOG00000006740	POC1A	94	88.462	Cavia_porcellus
ENSOMEG00000019834	POC1A	98	68.155	ENSCCAG00000023380	POC1A	98	68.769	Cebus_capucinus
ENSOMEG00000019834	POC1A	97	73.129	ENSCATG00000021822	POC1A	99	76.596	Cercocebus_atys
ENSOMEG00000019834	POC1A	75	88.462	ENSCLAG00000010593	POC1A	96	88.462	Chinchilla_lanigera
ENSOMEG00000019834	POC1A	78	65.060	ENSCSAG00000013862	POC1A	98	79.545	Chlorocebus_sabaeus
ENSOMEG00000019834	POC1A	63	80.515	ENSCPBG00000016728	POC1A	98	80.515	Chrysemys_picta_bellii
ENSOMEG00000019834	POC1A	94	52.995	ENSCSAVG00000008477	-	98	64.438	Ciona_savignyi
ENSOMEG00000019834	POC1A	98	70.606	ENSCANG00000033064	POC1A	97	88.462	Colobus_angolensis_palliatus
ENSOMEG00000019834	POC1A	97	60.349	ENSCGRG00001007357	Poc1a	90	71.818	Cricetulus_griseus_chok1gshd
ENSOMEG00000019834	POC1A	99	68.670	ENSCSEG00000010287	POC1A	98	84.775	Cynoglossus_semilaevis
ENSOMEG00000019834	POC1A	99	75.789	ENSCVAG00000015594	POC1A	99	86.975	Cyprinodon_variegatus
ENSOMEG00000019834	POC1A	95	52.268	ENSEBUG00000002614	POC1A	92	52.371	Eptatretus_burgeri
ENSOMEG00000019834	POC1A	68	59.459	ENSEBUG00000008013	poc1a	85	59.459	Eptatretus_burgeri
ENSOMEG00000019834	POC1A	51	55.102	ENSEBUG00000008246	POC1A	55	55.102	Eptatretus_burgeri
ENSOMEG00000019834	POC1A	76	75.692	ENSELUG00000015504	poc1a	98	61.707	Esox_lucius
ENSOMEG00000019834	POC1A	76	88.462	ENSFCAG00000015704	POC1A	98	88.462	Felis_catus
ENSOMEG00000019834	POC1A	97	59.292	ENSFALG00000008922	POC1A	97	59.292	Ficedula_albicollis
ENSOMEG00000019834	POC1A	98	65.070	ENSFDAG00000011606	POC1A	94	73.529	Fukomys_damarensis
ENSOMEG00000019834	POC1A	99	78.436	ENSFHEG00000015504	POC1A	89	94.595	Fundulus_heteroclitus
ENSOMEG00000019834	POC1A	97	61.810	ENSGALG00000034572	-	87	75.000	Gallus_gallus
ENSOMEG00000019834	POC1A	99	69.783	ENSGACG00000007015	poc1a	98	70.282	Gasterosteus_aculeatus
ENSOMEG00000019834	POC1A	97	62.582	ENSGAGG00000014637	POC1A	97	62.582	Gopherus_agassizii
ENSOMEG00000019834	POC1A	98	72.843	ENSGGOG00000006652	POC1A	98	72.843	Gorilla_gorilla
ENSOMEG00000019834	POC1A	76	88.462	ENSHGLG00000013436	POC1A	97	88.462	Heterocephalus_glaber_female
ENSOMEG00000019834	POC1A	96	56.222	ENSHGLG00100003479	POC1A	97	56.444	Heterocephalus_glaber_male
ENSOMEG00000019834	POC1A	98	77.586	ENSIPUG00000001227	POC1A	98	61.688	Ictalurus_punctatus
ENSOMEG00000019834	POC1A	98	70.517	ENSSTOG00000002638	POC1A	97	88.462	Ictidomys_tridecemlineatus
ENSOMEG00000019834	POC1A	97	71.385	ENSJJAG00000018739	Poc1a	96	84.615	Jaculus_jaculus
ENSOMEG00000019834	POC1A	99	77.944	ENSLBEG00000016119	POC1A	99	78.970	Labrus_bergylta
ENSOMEG00000019834	POC1A	99	64.009	ENSLACG00000018788	POC1A	90	77.564	Latimeria_chalumnae
ENSOMEG00000019834	POC1A	100	66.525	ENSLOCG00000013801	poc1a	100	65.678	Lepisosteus_oculatus
ENSOMEG00000019834	POC1A	76	70.370	ENSLAFG00000028434	POC1A	98	70.608	Loxodonta_africana
ENSOMEG00000019834	POC1A	78	64.759	ENSMFAG00000001970	POC1A	98	79.545	Macaca_fascicularis
ENSOMEG00000019834	POC1A	97	65.135	ENSMMUG00000012485	POC1A	99	76.596	Macaca_mulatta
ENSOMEG00000019834	POC1A	78	64.759	ENSMNEG00000042811	POC1A	98	79.545	Macaca_nemestrina
ENSOMEG00000019834	POC1A	98	70.000	ENSMLEG00000039574	POC1A	97	88.462	Mandrillus_leucophaeus
ENSOMEG00000019834	POC1A	97	79.271	ENSMAMG00000014233	POC1A	99	79.271	Mastacembelus_armatus
ENSOMEG00000019834	POC1A	99	80.426	ENSMZEG00005013503	POC1A	99	80.426	Maylandia_zebra
ENSOMEG00000019834	POC1A	97	60.297	ENSMGAG00000001628	POC1A	97	60.722	Meleagris_gallopavo
ENSOMEG00000019834	POC1A	97	60.532	ENSMAUG00000017403	Poc1a	90	71.733	Mesocricetus_auratus
ENSOMEG00000019834	POC1A	98	72.393	ENSMICG00000002709	POC1A	96	88.462	Microcebus_murinus
ENSOMEG00000019834	POC1A	94	59.765	ENSMOCG00000003396	Poc1a	95	66.759	Microtus_ochrogaster
ENSOMEG00000019834	POC1A	99	84.354	ENSMMOG00000010427	poc1a	73	84.932	Mola_mola
ENSOMEG00000019834	POC1A	95	60.235	ENSMODG00000011717	POC1A	96	59.859	Monodelphis_domestica
ENSOMEG00000019834	POC1A	77	94.118	ENSMALG00000009054	poc1a	96	94.118	Monopterus_albus
ENSOMEG00000019834	POC1A	76	82.143	MGP_CAROLIEiJ_G0032617	Poc1a	98	82.143	Mus_caroli
ENSOMEG00000019834	POC1A	97	61.197	ENSMUSG00000023345	Poc1a	98	82.143	Mus_musculus
ENSOMEG00000019834	POC1A	97	61.197	MGP_PahariEiJ_G0015485	Poc1a	98	82.143	Mus_pahari
ENSOMEG00000019834	POC1A	76	82.143	MGP_SPRETEiJ_G0033763	Poc1a	98	82.143	Mus_spretus
ENSOMEG00000019834	POC1A	98	59.389	ENSMPUG00000011723	POC1A	99	58.952	Mustela_putorius_furo
ENSOMEG00000019834	POC1A	97	60.398	ENSMLUG00000015092	POC1A	89	60.398	Myotis_lucifugus
ENSOMEG00000019834	POC1A	97	58.057	ENSNGAG00000005212	Poc1a	91	72.340	Nannospalax_galili
ENSOMEG00000019834	POC1A	97	72.967	ENSNBRG00000022135	poc1a	98	71.678	Neolamprologus_brichardi
ENSOMEG00000019834	POC1A	98	69.697	ENSNLEG00000007084	POC1A	98	79.545	Nomascus_leucogenys
ENSOMEG00000019834	POC1A	68	95.652	ENSMEUG00000007715	-	78	95.652	Notamacropus_eugenii
ENSOMEG00000019834	POC1A	94	59.524	ENSOPRG00000008831	POC1A	90	59.338	Ochotona_princeps
ENSOMEG00000019834	POC1A	96	59.956	ENSODEG00000018290	POC1A	97	77.273	Octodon_degus
ENSOMEG00000019834	POC1A	99	79.787	ENSONIG00000014378	POC1A	99	79.787	Oreochromis_niloticus
ENSOMEG00000019834	POC1A	94	57.416	ENSOCUG00000002080	POC1A	98	57.177	Oryctolagus_cuniculus
ENSOMEG00000019834	POC1A	81	67.120	ENSOGAG00000032245	POC1A	88	67.120	Otolemur_garnettii
ENSOMEG00000019834	POC1A	83	74.468	ENSOARG00000006352	POC1A	97	61.283	Ovis_aries
ENSOMEG00000019834	POC1A	98	70.303	ENSPPAG00000043583	POC1A	98	70.303	Pan_paniscus
ENSOMEG00000019834	POC1A	76	88.462	ENSPPRG00000003365	POC1A	98	88.462	Panthera_pardus
ENSOMEG00000019834	POC1A	94	59.809	ENSPTIG00000005388	POC1A	98	59.330	Panthera_tigris_altaica
ENSOMEG00000019834	POC1A	98	70.303	ENSPTRG00000014989	POC1A	98	70.303	Pan_troglodytes
ENSOMEG00000019834	POC1A	70	77.885	ENSPSIG00000014809	POC1A	89	77.885	Pelodiscus_sinensis
ENSOMEG00000019834	POC1A	76	77.126	ENSPMGG00000005356	poc1a	86	77.126	Periophthalmus_magnuspinnatus
ENSOMEG00000019834	POC1A	96	60.839	ENSPEMG00000024131	Poc1a	99	71.515	Peromyscus_maniculatus_bairdii
ENSOMEG00000019834	POC1A	96	58.723	ENSPMAG00000000333	poc1a	97	58.925	Petromyzon_marinus
ENSOMEG00000019834	POC1A	97	61.538	ENSPCIG00000018160	POC1A	98	61.758	Phascolarctos_cinereus
ENSOMEG00000019834	POC1A	97	65.676	ENSPPYG00000013816	POC1A	98	65.676	Pongo_abelii
ENSOMEG00000019834	POC1A	98	60.480	ENSPCAG00000002118	POC1A	98	60.480	Procavia_capensis
ENSOMEG00000019834	POC1A	98	71.212	ENSPCOG00000012625	POC1A	97	88.462	Propithecus_coquereli
ENSOMEG00000019834	POC1A	75	88.462	ENSPVAG00000012480	POC1A	84	88.462	Pteropus_vampyrus
ENSOMEG00000019834	POC1A	97	75.163	ENSPNYG00000019517	poc1a	99	74.409	Pundamilia_nyererei
ENSOMEG00000019834	POC1A	99	66.882	ENSPNAG00000007556	POC1A	98	65.152	Pygocentrus_nattereri
ENSOMEG00000019834	POC1A	95	57.210	ENSRNOG00000037295	Poc1a	98	69.536	Rattus_norvegicus
ENSOMEG00000019834	POC1A	98	70.606	ENSRBIG00000031748	POC1A	97	88.462	Rhinopithecus_bieti
ENSOMEG00000019834	POC1A	98	70.303	ENSRROG00000044472	POC1A	97	88.462	Rhinopithecus_roxellana
ENSOMEG00000019834	POC1A	98	68.155	ENSSBOG00000027902	POC1A	96	88.462	Saimiri_boliviensis_boliviensis
ENSOMEG00000019834	POC1A	99	77.564	ENSSMAG00000013505	POC1A	99	77.564	Scophthalmus_maximus
ENSOMEG00000019834	POC1A	99	80.687	ENSSDUG00000016161	POC1A	99	80.901	Seriola_dumerili
ENSOMEG00000019834	POC1A	99	89.384	ENSSLDG00000003828	POC1A	98	94.286	Seriola_lalandi_dorsalis
ENSOMEG00000019834	POC1A	68	76.868	ENSSPUG00000008656	POC1A	99	61.312	Sphenodon_punctatus
ENSOMEG00000019834	POC1A	99	54.253	ENSSPAG00000020330	POC1A	95	62.174	Stegastes_partitus
ENSOMEG00000019834	POC1A	97	60.746	ENSSSCG00000011426	POC1A	99	57.298	Sus_scrofa
ENSOMEG00000019834	POC1A	97	62.306	ENSTGUG00000006036	POC1A	98	59.645	Taeniopygia_guttata
ENSOMEG00000019834	POC1A	96	69.231	ENSTRUG00000007900	POC1A	78	83.333	Takifugu_rubripes
ENSOMEG00000019834	POC1A	99	65.496	ENSTNIG00000014818	POC1A	99	64.803	Tetraodon_nigroviridis
ENSOMEG00000019834	POC1A	98	58.606	ENSTTRG00000016798	POC1A	92	73.913	Tursiops_truncatus
ENSOMEG00000019834	POC1A	97	59.471	ENSUAMG00000020816	POC1A	93	70.629	Ursus_americanus
ENSOMEG00000019834	POC1A	94	58.753	ENSUMAG00000021482	POC1A	98	58.273	Ursus_maritimus
ENSOMEG00000019834	POC1A	96	62.281	ENSXETG00000010813	poc1a	97	62.031	Xenopus_tropicalis