EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000020080 (Gene tree)
Gene ID: 112148657
Gene Symbol: atxn2
Alias: -
Full Name: ataxin 2
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 23691 bases
Position: chrNVQA01000012.1:19820350-19844040
Accession: ZDB-GENE-060526-217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000018350	PAM2	PF07145.15	6.9e-06	1	1
ENSOMEP00000018296	PAM2	PF07145.15	6.9e-06	1	1
ENSOMEP00000018381	PAM2	PF07145.15	7e-06	1	1
ENSOMEP00000018350	LsmAD	PF06741.13	6.6e-15	1	1
ENSOMEP00000018296	LsmAD	PF06741.13	6.6e-15	1	1
ENSOMEP00000018381	LsmAD	PF06741.13	6.7e-15	1	1
ENSOMEP00000018350	SM-ATX	PF14438.6	1.3e-20	1	1
ENSOMEP00000018296	SM-ATX	PF14438.6	1.3e-20	1	1
ENSOMEP00000018381	SM-ATX	PF14438.6	1.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000027299	-	5983	-	ENSOMEP00000018350	1040 (aa)	-	-
ENSOMET00000027338	-	6001	-	ENSOMEP00000018381	1046 (aa)	-	-
ENSOMET00000027243	-	4734	-	ENSOMEP00000018296	1042 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000020080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000020080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000020080	atxn2	99	87.189	ENSAPOG00000014663	atxn2	99	86.494	Acanthochromis_polyacanthus
ENSOMEG00000020080	atxn2	96	69.032	ENSAMEG00000013747	ATXN2	99	47.568	Ailuropoda_melanoleuca
ENSOMEG00000020080	atxn2	94	88.732	ENSACIG00000004928	atxn2	77	88.732	Amphilophus_citrinellus
ENSOMEG00000020080	atxn2	99	86.647	ENSAOCG00000001107	atxn2	99	86.015	Amphiprion_ocellaris
ENSOMEG00000020080	atxn2	99	86.782	ENSAPEG00000020250	atxn2	99	86.111	Amphiprion_percula
ENSOMEG00000020080	atxn2	94	88.028	ENSATEG00000018587	atxn2	93	88.028	Anabas_testudineus
ENSOMEG00000020080	atxn2	97	68.471	ENSANAG00000022522	ATXN2	95	67.097	Aotus_nancymaae
ENSOMEG00000020080	atxn2	94	87.324	ENSACLG00000013359	atxn2	98	68.686	Astatotilapia_calliptera
ENSOMEG00000020080	atxn2	99	70.746	ENSAMXG00000002342	atxn2	99	70.374	Astyanax_mexicanus
ENSOMEG00000020080	atxn2	95	70.242	ENSBTAG00000022069	ATXN2	95	68.065	Bos_taurus
ENSOMEG00000020080	atxn2	97	68.339	ENSCJAG00000011756	ATXN2	95	61.613	Callithrix_jacchus
ENSOMEG00000020080	atxn2	96	69.333	ENSCAFG00000008606	ATXN2	81	43.333	Canis_familiaris
ENSOMEG00000020080	atxn2	95	70.242	ENSCAFG00020017041	ATXN2	99	43.398	Canis_lupus_dingo
ENSOMEG00000020080	atxn2	97	67.913	ENSCHIG00000012141	ATXN2	78	67.385	Capra_hircus
ENSOMEG00000020080	atxn2	96	69.032	ENSTSYG00000002717	ATXN2	95	67.742	Carlito_syrichta
ENSOMEG00000020080	atxn2	73	81.416	ENSCAPG00000013332	ATXN2	98	49.273	Cavia_aperea
ENSOMEG00000020080	atxn2	97	68.987	ENSCPOG00000001390	ATXN2	82	45.063	Cavia_porcellus
ENSOMEG00000020080	atxn2	97	68.770	ENSCCAG00000026267	ATXN2	95	67.419	Cebus_capucinus
ENSOMEG00000020080	atxn2	90	68.333	ENSCATG00000017877	ATXN2	89	66.469	Cercocebus_atys
ENSOMEG00000020080	atxn2	96	69.775	ENSCLAG00000009324	ATXN2	97	45.176	Chinchilla_lanigera
ENSOMEG00000020080	atxn2	75	61.111	ENSCHOG00000004284	ATXN2	78	61.111	Choloepus_hoffmanni
ENSOMEG00000020080	atxn2	95	57.905	ENSCPBG00000003465	ATXN2	99	58.505	Chrysemys_picta_bellii
ENSOMEG00000020080	atxn2	82	68.696	ENSCGRG00000015823	Atxn2	98	44.675	Cricetulus_griseus_crigri
ENSOMEG00000020080	atxn2	99	79.524	ENSCSEG00000009072	-	99	79.578	Cynoglossus_semilaevis
ENSOMEG00000020080	atxn2	99	80.548	ENSCSEG00000018366	atxn2	99	81.333	Cynoglossus_semilaevis
ENSOMEG00000020080	atxn2	97	81.827	ENSCVAG00000020160	atxn2	99	82.150	Cyprinodon_variegatus
ENSOMEG00000020080	atxn2	52	59.807	ENSETEG00000005224	ATXN2	71	59.807	Echinops_telfairi
ENSOMEG00000020080	atxn2	97	69.427	ENSEASG00005012077	ATXN2	95	67.470	Equus_asinus_asinus
ENSOMEG00000020080	atxn2	97	69.551	ENSECAG00000014347	ATXN2	77	67.359	Equus_caballus
ENSOMEG00000020080	atxn2	74	68.065	ENSEEUG00000014635	-	71	68.065	Erinaceus_europaeus
ENSOMEG00000020080	atxn2	92	79.883	ENSELUG00000019632	atxn2	93	79.883	Esox_lucius
ENSOMEG00000020080	atxn2	96	70.000	ENSFCAG00000003178	ATXN2	95	62.581	Felis_catus
ENSOMEG00000020080	atxn2	96	69.677	ENSFDAG00000020942	ATXN2	95	67.674	Fukomys_damarensis
ENSOMEG00000020080	atxn2	91	81.904	ENSFHEG00000019561	atxn2	98	82.168	Fundulus_heteroclitus
ENSOMEG00000020080	atxn2	88	87.372	ENSGMOG00000007412	atxn2	85	87.415	Gadus_morhua
ENSOMEG00000020080	atxn2	94	90.444	ENSGAFG00000003302	atxn2	99	83.477	Gambusia_affinis
ENSOMEG00000020080	atxn2	95	88.396	ENSGACG00000006295	atxn2	93	88.396	Gasterosteus_aculeatus
ENSOMEG00000020080	atxn2	95	58.638	ENSGAGG00000005014	ATXN2	99	59.018	Gopherus_agassizii
ENSOMEG00000020080	atxn2	99	84.100	ENSHBUG00000002921	atxn2	99	83.477	Haplochromis_burtoni
ENSOMEG00000020080	atxn2	96	69.677	ENSHGLG00100019351	ATXN2	95	67.674	Heterocephalus_glaber_male
ENSOMEG00000020080	atxn2	99	79.561	ENSHCOG00000005278	atxn2	96	79.012	Hippocampus_comes
ENSOMEG00000020080	atxn2	97	67.221	ENSIPUG00000016649	atxn2	99	66.256	Ictalurus_punctatus
ENSOMEG00000020080	atxn2	96	69.032	ENSSTOG00000000978	ATXN2	99	52.475	Ictidomys_tridecemlineatus
ENSOMEG00000020080	atxn2	99	85.182	ENSKMAG00000000980	atxn2	99	85.277	Kryptolebias_marmoratus
ENSOMEG00000020080	atxn2	59	76.244	ENSLBEG00000017484	atxn2	89	77.986	Labrus_bergylta
ENSOMEG00000020080	atxn2	97	76.997	ENSLOCG00000007880	atxn2	91	76.997	Lepisosteus_oculatus
ENSOMEG00000020080	atxn2	65	52.489	ENSLAFG00000007416	ATXN2	98	52.250	Loxodonta_africana
ENSOMEG00000020080	atxn2	90	68.333	ENSMNEG00000035588	ATXN2	95	67.097	Macaca_nemestrina
ENSOMEG00000020080	atxn2	99	84.904	ENSMAMG00000019160	atxn2	98	85.385	Mastacembelus_armatus
ENSOMEG00000020080	atxn2	99	84.004	ENSMZEG00005008476	atxn2	99	83.381	Maylandia_zebra
ENSOMEG00000020080	atxn2	65	52.991	ENSMAUG00000008223	-	98	52.471	Mesocricetus_auratus
ENSOMEG00000020080	atxn2	95	69.896	ENSMICG00000013541	ATXN2	95	67.742	Microcebus_murinus
ENSOMEG00000020080	atxn2	65	52.137	ENSMOCG00000005219	Atxn2	98	51.599	Microtus_ochrogaster
ENSOMEG00000020080	atxn2	94	88.380	ENSMMOG00000013189	atxn2	91	90.984	Mola_mola
ENSOMEG00000020080	atxn2	99	83.654	ENSMALG00000018529	atxn2	99	83.077	Monopterus_albus
ENSOMEG00000020080	atxn2	95	67.785	MGP_CAROLIEiJ_G0027692	Atxn2	91	65.579	Mus_caroli
ENSOMEG00000020080	atxn2	95	68.456	ENSMUSG00000042605	Atxn2	93	64.730	Mus_musculus
ENSOMEG00000020080	atxn2	65	51.709	MGP_PahariEiJ_G0024272	Atxn2	98	50.073	Mus_pahari
ENSOMEG00000020080	atxn2	65	51.994	MGP_SPRETEiJ_G0028690	Atxn2	98	51.092	Mus_spretus
ENSOMEG00000020080	atxn2	96	62.903	ENSMPUG00000002212	ATXN2	95	61.329	Mustela_putorius_furo
ENSOMEG00000020080	atxn2	97	69.329	ENSMLUG00000015559	ATXN2	99	44.194	Myotis_lucifugus
ENSOMEG00000020080	atxn2	94	88.732	ENSNBRG00000015794	atxn2	93	88.732	Neolamprologus_brichardi
ENSOMEG00000020080	atxn2	82	75.000	ENSMEUG00000012244	-	72	75.000	Notamacropus_eugenii
ENSOMEG00000020080	atxn2	95	69.550	ENSODEG00000010798	ATXN2	99	44.669	Octodon_degus
ENSOMEG00000020080	atxn2	96	89.068	ENSONIG00000014521	atxn2	92	89.068	Oreochromis_niloticus
ENSOMEG00000020080	atxn2	96	67.846	ENSOCUG00000002855	ATXN2	67	65.964	Oryctolagus_cuniculus
ENSOMEG00000020080	atxn2	94	94.903	ENSORLG00000003606	atxn2	99	94.903	Oryzias_latipes
ENSOMEG00000020080	atxn2	99	93.810	ENSORLG00020000785	atxn2	99	93.828	Oryzias_latipes_hni
ENSOMEG00000020080	atxn2	99	94.101	ENSORLG00015012345	atxn2	99	94.118	Oryzias_latipes_hsok
ENSOMEG00000020080	atxn2	97	69.329	ENSOARG00000018223	ATXN2	95	67.365	Ovis_aries
ENSOMEG00000020080	atxn2	96	69.667	ENSPPRG00000003573	ATXN2	95	62.903	Panthera_pardus
ENSOMEG00000020080	atxn2	95	70.242	ENSPTIG00000021122	ATXN2	95	68.065	Panthera_tigris_altaica
ENSOMEG00000020080	atxn2	97	70.996	ENSPKIG00000023134	atxn2	97	70.367	Paramormyrops_kingsleyae
ENSOMEG00000020080	atxn2	96	72.347	ENSPSIG00000002353	-	99	45.512	Pelodiscus_sinensis
ENSOMEG00000020080	atxn2	95	86.268	ENSPMGG00000005074	atxn2	93	86.268	Periophthalmus_magnuspinnatus
ENSOMEG00000020080	atxn2	65	51.994	ENSPEMG00000015340	Atxn2	92	66.525	Peromyscus_maniculatus_bairdii
ENSOMEG00000020080	atxn2	54	71.429	ENSPCIG00000006165	-	90	67.980	Phascolarctos_cinereus
ENSOMEG00000020080	atxn2	97	82.630	ENSPLAG00000015241	atxn2	99	83.028	Poecilia_latipinna
ENSOMEG00000020080	atxn2	97	83.317	ENSPMEG00000016681	atxn2	99	83.703	Poecilia_mexicana
ENSOMEG00000020080	atxn2	95	90.068	ENSPREG00000014825	atxn2	93	90.068	Poecilia_reticulata
ENSOMEG00000020080	atxn2	95	69.333	ENSPVAG00000013179	ATXN2	78	67.062	Pteropus_vampyrus
ENSOMEG00000020080	atxn2	60	70.523	ENSPNYG00000016981	atxn2	82	83.956	Pundamilia_nyererei
ENSOMEG00000020080	atxn2	97	73.197	ENSPNAG00000010889	atxn2	99	70.644	Pygocentrus_nattereri
ENSOMEG00000020080	atxn2	89	69.550	ENSRROG00000031170	ATXN2	95	67.419	Rhinopithecus_roxellana
ENSOMEG00000020080	atxn2	95	69.204	ENSSBOG00000031563	ATXN2	95	67.097	Saimiri_boliviensis_boliviensis
ENSOMEG00000020080	atxn2	94	91.579	ENSSMAG00000004627	atxn2	93	91.579	Scophthalmus_maximus
ENSOMEG00000020080	atxn2	99	86.852	ENSSDUG00000001223	atxn2	97	86.564	Seriola_dumerili
ENSOMEG00000020080	atxn2	94	90.493	ENSSLDG00000019837	atxn2	99	71.216	Seriola_lalandi_dorsalis
ENSOMEG00000020080	atxn2	70	66.935	ENSSARG00000006291	ATXN2	67	66.129	Sorex_araneus
ENSOMEG00000020080	atxn2	100	86.174	ENSSPAG00000000377	atxn2	98	86.233	Stegastes_partitus
ENSOMEG00000020080	atxn2	96	57.797	ENSSSCG00000009834	ATXN2	93	57.895	Sus_scrofa
ENSOMEG00000020080	atxn2	96	56.636	ENSTGUG00000006497	ATXN2	99	56.736	Taeniopygia_guttata
ENSOMEG00000020080	atxn2	99	87.390	ENSTRUG00000016801	atxn2	93	87.390	Takifugu_rubripes
ENSOMEG00000020080	atxn2	79	65.185	ENSTBEG00000001985	ATXN2	80	65.185	Tupaia_belangeri
ENSOMEG00000020080	atxn2	84	66.000	ENSTTRG00000000952	ATXN2	72	64.350	Tursiops_truncatus
ENSOMEG00000020080	atxn2	96	69.333	ENSUAMG00000025295	ATXN2	93	47.354	Ursus_americanus
ENSOMEG00000020080	atxn2	95	70.242	ENSUMAG00000007315	ATXN2	99	47.291	Ursus_maritimus
ENSOMEG00000020080	atxn2	86	69.784	ENSVPAG00000005940	ATXN2	86	67.559	Vicugna_pacos
ENSOMEG00000020080	atxn2	95	70.242	ENSVVUG00000016107	ATXN2	94	68.065	Vulpes_vulpes
ENSOMEG00000020080	atxn2	58	76.873	ENSXCOG00000010001	atxn2	94	77.397	Xiphophorus_couchianus
ENSOMEG00000020080	atxn2	97	83.808	ENSXMAG00000003481	atxn2	99	84.038	Xiphophorus_maculatus