EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000020162 (Gene tree)
Gene ID: 112155153
Gene Symbol: -
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 71212 bases
Position: chrNVQA01000019.1:16308924-16380135
Accession: 112155153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000018453	KH_1	PF00013.29	1e-54	1	3
ENSOMEP00000018453	KH_1	PF00013.29	1e-54	2	3
ENSOMEP00000018453	KH_1	PF00013.29	1e-54	3	3
ENSOMEP00000018414	KH_1	PF00013.29	1e-50	1	3
ENSOMEP00000018414	KH_1	PF00013.29	1e-50	2	3
ENSOMEP00000018414	KH_1	PF00013.29	1e-50	3	3
ENSOMEP00000018453	KH_2	PF07650.17	1.7e-14	1	1
ENSOMEP00000018414	KH_2	PF07650.17	8.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000027383	-	942	-	ENSOMEP00000018414	313 (aa)	-	-
ENSOMET00000035253	-	5769	-	ENSOMEP00000018453	321 (aa)	XP_024142425	UPI000CF7DD25

Gene Model

Click here to download ENSOMEG00000020162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000020162's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000020162	-	97	34.507	ENSOMEG00000017916	igf2bp3	63	34.507
ENSOMEG00000020162	-	97	73.651	ENSOMEG00000015459	-	72	74.359
ENSOMEG00000020162	-	90	40.323	ENSOMEG00000013233	khsrp	57	40.323
ENSOMEG00000020162	-	94	63.366	ENSOMEG00000003516	-	65	63.366
ENSOMEG00000020162	-	97	39.683	ENSOMEG00000007725	-	65	39.683
ENSOMEG00000020162	-	80	52.857	ENSOMEG00000023618	hnrnpk	58	52.857
ENSOMEG00000020162	-	95	94.138	ENSOMEG00000020811	pcbp3	99	94.138
ENSOMEG00000020162	-	77	52.857	ENSOMEG00000010595	hnrpkl	59	52.857
ENSOMEG00000020162	-	94	63.110	ENSOMEG00000011545	-	71	63.110
ENSOMEG00000020162	-	97	35.955	ENSOMEG00000001908	igf2bp2b	66	33.529
ENSOMEG00000020162	-	76	37.000	ENSOMEG00000021943	fubp1	58	39.726
ENSOMEG00000020162	-	90	40.845	ENSOMEG00000015479	nova1	53	40.845
ENSOMEG00000020162	-	97	80.000	ENSOMEG00000019014	PCBP2	97	80.000
ENSOMEG00000020162	-	99	76.380	ENSOMEG00000005759	pcbp2	99	76.380
ENSOMEG00000020162	-	89	39.062	ENSOMEG00000004190	fubp3	62	39.062

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000020162	-	97	98.714	ENSAPOG00000016582	-	100	95.370	Acanthochromis_polyacanthus
ENSOMEG00000020162	-	99	94.839	ENSAPOG00000020003	pcbp3	89	94.839	Acanthochromis_polyacanthus
ENSOMEG00000020162	-	98	91.291	ENSAMEG00000001697	-	99	87.069	Ailuropoda_melanoleuca
ENSOMEG00000020162	-	97	88.720	ENSACIG00000010933	pcbp3	99	84.839	Amphilophus_citrinellus
ENSOMEG00000020162	-	100	94.769	ENSACIG00000002739	-	100	94.769	Amphilophus_citrinellus
ENSOMEG00000020162	-	97	96.774	ENSAOCG00000008592	-	98	96.774	Amphiprion_ocellaris
ENSOMEG00000020162	-	95	94.198	ENSAOCG00000007806	-	100	94.198	Amphiprion_ocellaris
ENSOMEG00000020162	-	100	96.885	ENSAPEG00000005209	-	100	96.885	Amphiprion_percula
ENSOMEG00000020162	-	97	89.286	ENSAPEG00000008011	pcbp3	95	89.286	Amphiprion_percula
ENSOMEG00000020162	-	96	89.846	ENSATEG00000015787	-	100	89.846	Anabas_testudineus
ENSOMEG00000020162	-	100	97.785	ENSATEG00000009833	-	100	97.785	Anabas_testudineus
ENSOMEG00000020162	-	95	77.841	ENSAPLG00000008951	-	79	77.841	Anas_platyrhynchos
ENSOMEG00000020162	-	98	92.683	ENSAPLG00000002975	-	98	92.683	Anas_platyrhynchos
ENSOMEG00000020162	-	98	85.434	ENSACAG00000004607	-	99	85.434	Anolis_carolinensis
ENSOMEG00000020162	-	99	83.090	ENSACAG00000009819	-	99	83.090	Anolis_carolinensis
ENSOMEG00000020162	-	95	96.218	ENSANAG00000030702	-	100	96.218	Aotus_nancymaae
ENSOMEG00000020162	-	97	88.988	ENSACLG00000011835	pcbp3	95	88.988	Astatotilapia_calliptera
ENSOMEG00000020162	-	100	98.131	ENSACLG00000003801	-	100	98.131	Astatotilapia_calliptera
ENSOMEG00000020162	-	96	94.702	ENSAMXG00000013588	-	100	94.702	Astyanax_mexicanus
ENSOMEG00000020162	-	97	91.018	ENSAMXG00000003440	pcbp3	95	91.018	Astyanax_mexicanus
ENSOMEG00000020162	-	95	70.186	ENSAMXG00000001760	zgc:110045	72	70.186	Astyanax_mexicanus
ENSOMEG00000020162	-	90	96.943	ENSCAFG00020019472	-	81	96.943	Canis_lupus_dingo
ENSOMEG00000020162	-	98	96.815	ENSCSAG00000007440	-	89	96.815	Chlorocebus_sabaeus
ENSOMEG00000020162	-	97	83.183	ENSCPBG00000000733	-	74	82.196	Chrysemys_picta_bellii
ENSOMEG00000020162	-	95	97.368	ENSCPBG00000012151	-	99	91.317	Chrysemys_picta_bellii
ENSOMEG00000020162	-	100	80.236	ENSCSEG00000016984	-	100	80.236	Cynoglossus_semilaevis
ENSOMEG00000020162	-	96	96.358	ENSCSEG00000000822	pcbp3	99	96.358	Cynoglossus_semilaevis
ENSOMEG00000020162	-	100	98.131	ENSCVAG00000005262	-	100	98.131	Cyprinodon_variegatus
ENSOMEG00000020162	-	97	88.988	ENSCVAG00000014482	pcbp3	95	88.988	Cyprinodon_variegatus
ENSOMEG00000020162	-	100	91.570	ENSDARG00000054378	pcbp3	100	91.570	Danio_rerio
ENSOMEG00000020162	-	98	83.121	ENSETEG00000015988	-	98	83.121	Echinops_telfairi
ENSOMEG00000020162	-	98	81.703	ENSEBUG00000007485	-	92	82.192	Eptatretus_burgeri
ENSOMEG00000020162	-	93	69.841	ENSEBUG00000005495	pcbp3	75	69.841	Eptatretus_burgeri
ENSOMEG00000020162	-	95	73.571	ENSEBUG00000016192	pcbp3	99	73.606	Eptatretus_burgeri
ENSOMEG00000020162	-	98	90.323	ENSELUG00000003521	pcbp3	98	90.323	Esox_lucius
ENSOMEG00000020162	-	97	97.428	ENSELUG00000001560	-	99	85.632	Esox_lucius
ENSOMEG00000020162	-	95	78.125	ENSFALG00000004411	-	74	78.125	Ficedula_albicollis
ENSOMEG00000020162	-	98	96.178	ENSFALG00000003949	-	98	96.178	Ficedula_albicollis
ENSOMEG00000020162	-	97	96.066	ENSFHEG00000016615	pcbp3	96	96.066	Fundulus_heteroclitus
ENSOMEG00000020162	-	100	96.552	ENSFHEG00000006539	-	100	96.552	Fundulus_heteroclitus
ENSOMEG00000020162	-	95	70.821	ENSGMOG00000008611	-	99	70.821	Gadus_morhua
ENSOMEG00000020162	-	97	80.896	ENSGMOG00000011992	pcbp3	97	80.896	Gadus_morhua
ENSOMEG00000020162	-	98	83.099	ENSGALG00000004394	-	98	89.130	Gallus_gallus
ENSOMEG00000020162	-	97	82.738	ENSGALG00000013155	-	99	82.515	Gallus_gallus
ENSOMEG00000020162	-	98	86.269	ENSGAFG00000011430	pcbp3	97	86.269	Gambusia_affinis
ENSOMEG00000020162	-	97	98.392	ENSGAFG00000010274	-	95	98.392	Gambusia_affinis
ENSOMEG00000020162	-	100	91.228	ENSGACG00000002266	-	100	91.228	Gasterosteus_aculeatus
ENSOMEG00000020162	-	100	79.396	ENSGACG00000014955	-	100	79.396	Gasterosteus_aculeatus
ENSOMEG00000020162	-	76	89.674	ENSGAGG00000006956	-	76	89.674	Gopherus_agassizii
ENSOMEG00000020162	-	91	89.513	ENSGAGG00000000271	-	100	89.513	Gopherus_agassizii
ENSOMEG00000020162	-	100	98.131	ENSHBUG00000021782	-	100	98.131	Haplochromis_burtoni
ENSOMEG00000020162	-	97	93.548	ENSHBUG00000010697	pcbp3	98	93.548	Haplochromis_burtoni
ENSOMEG00000020162	-	100	93.146	ENSHCOG00000006067	-	100	93.146	Hippocampus_comes
ENSOMEG00000020162	-	97	89.254	ENSHCOG00000017868	pcbp3	95	89.254	Hippocampus_comes
ENSOMEG00000020162	-	100	97.764	ENSIPUG00000006238	pcbp3	100	97.764	Ictalurus_punctatus
ENSOMEG00000020162	-	97	97.428	ENSKMAG00000018530	-	95	97.428	Kryptolebias_marmoratus
ENSOMEG00000020162	-	97	89.286	ENSKMAG00000003046	pcbp3	95	89.286	Kryptolebias_marmoratus
ENSOMEG00000020162	-	99	93.930	ENSLBEG00000006201	pcbp3	98	93.930	Labrus_bergylta
ENSOMEG00000020162	-	100	82.663	ENSLBEG00000006542	-	100	82.663	Labrus_bergylta
ENSOMEG00000020162	-	97	77.465	ENSLACG00000010804	zgc:110045	75	77.465	Latimeria_chalumnae
ENSOMEG00000020162	-	97	83.473	ENSLACG00000010386	pcbp3	75	83.473	Latimeria_chalumnae
ENSOMEG00000020162	-	98	91.617	ENSLOCG00000009369	pcbp3	99	91.617	Lepisosteus_oculatus
ENSOMEG00000020162	-	95	82.875	ENSLOCG00000005058	zgc:110045	80	82.875	Lepisosteus_oculatus
ENSOMEG00000020162	-	100	96.519	ENSMAMG00000011620	-	100	96.519	Mastacembelus_armatus
ENSOMEG00000020162	-	96	96.358	ENSMAMG00000022336	pcbp3	93	96.358	Mastacembelus_armatus
ENSOMEG00000020162	-	97	90.127	ENSMZEG00005014882	-	100	86.257	Maylandia_zebra
ENSOMEG00000020162	-	97	87.126	ENSMZEG00005008993	pcbp3	98	86.527	Maylandia_zebra
ENSOMEG00000020162	-	94	81.159	ENSMGAG00000001883	-	95	81.449	Meleagris_gallopavo
ENSOMEG00000020162	-	95	78.125	ENSMGAG00000006794	-	74	78.125	Meleagris_gallopavo
ENSOMEG00000020162	-	97	92.949	ENSMMOG00000000730	pcbp3	88	92.949	Mola_mola
ENSOMEG00000020162	-	100	97.764	ENSMMOG00000005216	-	100	97.764	Mola_mola
ENSOMEG00000020162	-	73	77.103	ENSMODG00000027884	-	93	77.103	Monodelphis_domestica
ENSOMEG00000020162	-	96	89.538	ENSMALG00000000691	pcbp3	95	89.538	Monopterus_albus
ENSOMEG00000020162	-	100	85.000	ENSMPUG00000001779	-	92	85.000	Mustela_putorius_furo
ENSOMEG00000020162	-	97	90.764	ENSNBRG00000016714	-	99	89.474	Neolamprologus_brichardi
ENSOMEG00000020162	-	97	88.957	ENSNBRG00000016409	-	95	88.957	Neolamprologus_brichardi
ENSOMEG00000020162	-	95	82.849	ENSOPRG00000003431	-	99	82.849	Ochotona_princeps
ENSOMEG00000020162	-	97	84.419	ENSONIG00000012122	-	98	84.419	Oreochromis_niloticus
ENSOMEG00000020162	-	100	98.131	ENSONIG00000004611	-	100	98.131	Oreochromis_niloticus
ENSOMEG00000020162	-	98	96.178	ENSOCUG00000002696	-	89	96.178	Oryctolagus_cuniculus
ENSOMEG00000020162	-	100	99.377	ENSORLG00000022739	-	100	99.377	Oryzias_latipes
ENSOMEG00000020162	-	97	96.774	ENSORLG00000000059	pcbp3	100	96.774	Oryzias_latipes
ENSOMEG00000020162	-	99	95.298	ENSORLG00020012671	pcbp3	99	95.298	Oryzias_latipes_hni
ENSOMEG00000020162	-	100	99.065	ENSORLG00020006124	-	100	99.065	Oryzias_latipes_hni
ENSOMEG00000020162	-	99	97.500	ENSORLG00015008051	-	98	97.500	Oryzias_latipes_hsok
ENSOMEG00000020162	-	99	95.298	ENSORLG00015000429	pcbp3	99	95.298	Oryzias_latipes_hsok
ENSOMEG00000020162	-	98	83.611	ENSOGAG00000008044	-	99	83.611	Otolemur_garnettii
ENSOMEG00000020162	-	77	87.363	ENSPKIG00000020913	-	82	87.363	Paramormyrops_kingsleyae
ENSOMEG00000020162	-	100	96.190	ENSPKIG00000019329	pcbp3	100	96.190	Paramormyrops_kingsleyae
ENSOMEG00000020162	-	98	83.384	ENSPSIG00000014970	-	98	83.988	Pelodiscus_sinensis
ENSOMEG00000020162	-	91	81.301	ENSPSIG00000008350	-	68	81.301	Pelodiscus_sinensis
ENSOMEG00000020162	-	96	89.759	ENSPMGG00000022383	pcbp3	95	89.759	Periophthalmus_magnuspinnatus
ENSOMEG00000020162	-	91	88.830	ENSPMAG00000004637	-	97	88.830	Petromyzon_marinus
ENSOMEG00000020162	-	98	73.585	ENSPMAG00000004551	pcbp3	91	73.585	Petromyzon_marinus
ENSOMEG00000020162	-	98	90.208	ENSPCIG00000028092	-	99	90.208	Phascolarctos_cinereus
ENSOMEG00000020162	-	100	80.899	ENSPLAG00000011449	pcbp3	91	80.899	Poecilia_latipinna
ENSOMEG00000020162	-	99	94.720	ENSPLAG00000004074	-	92	94.720	Poecilia_latipinna
ENSOMEG00000020162	-	99	91.369	ENSPMEG00000006653	-	99	91.369	Poecilia_mexicana
ENSOMEG00000020162	-	96	88.988	ENSPMEG00000021239	pcbp3	95	88.988	Poecilia_mexicana
ENSOMEG00000020162	-	100	98.722	ENSPREG00000020585	-	100	98.722	Poecilia_reticulata
ENSOMEG00000020162	-	96	94.408	ENSPREG00000015736	pcbp3	99	94.408	Poecilia_reticulata
ENSOMEG00000020162	-	97	93.871	ENSPNYG00000012326	pcbp3	95	93.871	Pundamilia_nyererei
ENSOMEG00000020162	-	100	98.083	ENSPNYG00000013205	-	100	98.083	Pundamilia_nyererei
ENSOMEG00000020162	-	96	95.333	ENSPNAG00000008541	-	98	95.333	Pygocentrus_nattereri
ENSOMEG00000020162	-	100	97.819	ENSPNAG00000015104	pcbp3	100	97.819	Pygocentrus_nattereri
ENSOMEG00000020162	-	98	96.815	ENSRNOG00000001245	Pcbp3	98	96.815	Rattus_norvegicus
ENSOMEG00000020162	-	100	84.985	ENSRBIG00000028177	-	92	84.985	Rhinopithecus_bieti
ENSOMEG00000020162	-	98	90.719	ENSSHAG00000007890	-	99	90.719	Sarcophilus_harrisii
ENSOMEG00000020162	-	97	97.749	ENSSFOG00015010205	pcbp3	95	97.749	Scleropages_formosus
ENSOMEG00000020162	-	98	83.706	ENSSFOG00015007118	-	95	83.706	Scleropages_formosus
ENSOMEG00000020162	-	97	89.222	ENSSFOG00015014706	pcbp3	95	89.222	Scleropages_formosus
ENSOMEG00000020162	-	96	96.689	ENSSMAG00000011929	pcbp3	97	96.689	Scophthalmus_maximus
ENSOMEG00000020162	-	100	97.819	ENSSMAG00000003135	-	100	97.819	Scophthalmus_maximus
ENSOMEG00000020162	-	97	92.283	ENSSDUG00000008502	-	95	92.283	Seriola_dumerili
ENSOMEG00000020162	-	96	88.991	ENSSDUG00000011608	pcbp3	99	88.991	Seriola_dumerili
ENSOMEG00000020162	-	96	88.991	ENSSLDG00000008518	pcbp3	99	88.991	Seriola_lalandi_dorsalis
ENSOMEG00000020162	-	97	98.714	ENSSLDG00000020161	-	95	98.714	Seriola_lalandi_dorsalis
ENSOMEG00000020162	-	92	82.007	ENSSPUG00000013214	-	90	84.772	Sphenodon_punctatus
ENSOMEG00000020162	-	95	94.539	ENSSPAG00000004190	-	100	94.539	Stegastes_partitus
ENSOMEG00000020162	-	97	76.737	ENSSPAG00000023341	-	95	76.737	Stegastes_partitus
ENSOMEG00000020162	-	98	87.725	ENSTGUG00000003316	-	99	87.725	Taeniopygia_guttata
ENSOMEG00000020162	-	98	90.127	ENSTGUG00000008158	-	99	90.127	Taeniopygia_guttata
ENSOMEG00000020162	-	95	98.611	ENSTRUG00000006280	-	99	92.308	Takifugu_rubripes
ENSOMEG00000020162	-	97	90.741	ENSTRUG00000013604	pcbp3	95	90.741	Takifugu_rubripes
ENSOMEG00000020162	-	98	84.034	ENSTTRG00000015075	-	99	84.034	Tursiops_truncatus
ENSOMEG00000020162	-	98	89.521	ENSXETG00000011483	pcbp1	99	89.521	Xenopus_tropicalis
ENSOMEG00000020162	-	90	76.923	ENSXETG00000010491	pcbp2	74	76.923	Xenopus_tropicalis
ENSOMEG00000020162	-	96	88.988	ENSXCOG00000020481	pcbp3	95	88.988	Xiphophorus_couchianus
ENSOMEG00000020162	-	97	98.714	ENSXMAG00000028711	-	95	98.714	Xiphophorus_maculatus
ENSOMEG00000020162	-	97	89.286	ENSXMAG00000008175	pcbp3	95	89.286	Xiphophorus_maculatus