EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000020254 (Gene tree)
Gene ID: 112136542
Gene Symbol: -
Alias: -
Full Name: mex-3 RNA binding family member A
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 3386 bases
Position: chrNVQA01000034.1:4293826-4297211
Accession: 112136542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000018540	KH_1	PF00013.29	1.2e-25	1	2
ENSOMEP00000018540	KH_1	PF00013.29	1.2e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000027532	-	1548	-	ENSOMEP00000018540	515 (aa)	XP_024114061	UPI000CF7F457

Gene Model

Click here to download ENSOMEG00000020254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000020254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000020254	-	100	47.761	ENSOMEG00000020682	MEX3D	88	52.523

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000020254	-	100	91.321	ENSAPOG00000008262	-	100	91.321	Acanthochromis_polyacanthus
ENSOMEG00000020254	-	100	91.841	ENSACIG00000017394	-	97	91.461	Amphilophus_citrinellus
ENSOMEG00000020254	-	100	91.321	ENSAOCG00000015646	-	100	91.321	Amphiprion_ocellaris
ENSOMEG00000020254	-	100	91.321	ENSAPEG00000022160	-	100	91.321	Amphiprion_percula
ENSOMEG00000020254	-	100	92.220	ENSATEG00000006186	-	100	92.410	Anabas_testudineus
ENSOMEG00000020254	-	100	91.445	ENSACLG00000010278	-	83	92.015	Astatotilapia_calliptera
ENSOMEG00000020254	-	100	80.344	ENSAMXG00000024633	-	100	82.286	Astyanax_mexicanus
ENSOMEG00000020254	-	100	87.214	ENSCSEG00000012003	-	100	87.405	Cynoglossus_semilaevis
ENSOMEG00000020254	-	100	88.868	ENSCVAG00000020021	-	100	89.635	Cyprinodon_variegatus
ENSOMEG00000020254	-	100	84.000	ENSDARG00000076638	FO082781.1	100	82.667	Danio_rerio
ENSOMEG00000020254	-	100	88.292	ENSELUG00000012012	-	100	89.060	Esox_lucius
ENSOMEG00000020254	-	100	91.461	ENSFHEG00000003026	-	100	91.082	Fundulus_heteroclitus
ENSOMEG00000020254	-	69	88.710	ENSGMOG00000006456	-	69	81.944	Gadus_morhua
ENSOMEG00000020254	-	100	92.205	ENSGAFG00000021726	-	100	91.445	Gambusia_affinis
ENSOMEG00000020254	-	100	79.310	ENSGACG00000013282	-	99	78.159	Gasterosteus_aculeatus
ENSOMEG00000020254	-	100	91.445	ENSHBUG00000009342	-	83	92.015	Haplochromis_burtoni
ENSOMEG00000020254	-	98	79.811	ENSHCOG00000007164	-	100	77.358	Hippocampus_comes
ENSOMEG00000020254	-	100	78.172	ENSIPUG00000006083	mex3a	96	77.612	Ictalurus_punctatus
ENSOMEG00000020254	-	100	89.662	ENSKMAG00000015538	-	93	89.662	Kryptolebias_marmoratus
ENSOMEG00000020254	-	100	91.082	ENSLBEG00000016402	-	100	91.461	Labrus_bergylta
ENSOMEG00000020254	-	100	78.585	ENSLOCG00000008857	-	100	78.311	Lepisosteus_oculatus
ENSOMEG00000020254	-	100	91.461	ENSMAMG00000010269	-	100	91.461	Mastacembelus_armatus
ENSOMEG00000020254	-	100	91.065	ENSMZEG00005017507	-	100	91.825	Maylandia_zebra
ENSOMEG00000020254	-	97	88.304	ENSMMOG00000017114	-	90	87.914	Mola_mola
ENSOMEG00000020254	-	100	91.810	ENSMALG00000004078	-	93	91.810	Monopterus_albus
ENSOMEG00000020254	-	100	91.445	ENSNBRG00000005141	-	100	92.015	Neolamprologus_brichardi
ENSOMEG00000020254	-	100	83.871	ENSONIG00000002279	-	100	83.774	Oreochromis_niloticus
ENSOMEG00000020254	-	100	95.954	ENSORLG00000024166	-	91	95.954	Oryzias_latipes
ENSOMEG00000020254	-	100	96.146	ENSORLG00020013757	-	91	96.146	Oryzias_latipes_hni
ENSOMEG00000020254	-	100	96.724	ENSORLG00015019602	-	91	96.724	Oryzias_latipes_hsok
ENSOMEG00000020254	-	100	83.495	ENSPKIG00000009869	-	93	83.689	Paramormyrops_kingsleyae
ENSOMEG00000020254	-	100	81.238	ENSPKIG00000020911	-	100	82.012	Paramormyrops_kingsleyae
ENSOMEG00000020254	-	100	79.206	ENSPMGG00000004206	-	100	79.206	Periophthalmus_magnuspinnatus
ENSOMEG00000020254	-	100	91.856	ENSPFOG00000011366	-	100	91.098	Poecilia_formosa
ENSOMEG00000020254	-	100	92.030	ENSPLAG00000007972	-	100	91.271	Poecilia_latipinna
ENSOMEG00000020254	-	100	91.841	ENSPMEG00000001392	-	100	91.082	Poecilia_mexicana
ENSOMEG00000020254	-	100	91.856	ENSPREG00000017309	-	100	91.098	Poecilia_reticulata
ENSOMEG00000020254	-	100	91.445	ENSPNYG00000018270	-	100	92.015	Pundamilia_nyererei
ENSOMEG00000020254	-	100	81.308	ENSPNAG00000004505	-	100	80.961	Pygocentrus_nattereri
ENSOMEG00000020254	-	80	61.650	ENSSFOG00015008589	-	88	65.291	Scleropages_formosus
ENSOMEG00000020254	-	100	80.115	ENSSFOG00015024157	-	100	80.385	Scleropages_formosus
ENSOMEG00000020254	-	100	91.810	ENSSMAG00000016216	-	100	92.190	Scophthalmus_maximus
ENSOMEG00000020254	-	100	91.667	ENSSDUG00000006298	-	84	91.667	Seriola_dumerili
ENSOMEG00000020254	-	100	91.667	ENSSLDG00000012129	-	84	91.667	Seriola_lalandi_dorsalis
ENSOMEG00000020254	-	100	92.000	ENSSPAG00000012030	-	100	92.000	Stegastes_partitus
ENSOMEG00000020254	-	100	87.666	ENSTRUG00000007796	-	100	88.046	Takifugu_rubripes
ENSOMEG00000020254	-	72	86.979	ENSTNIG00000004473	-	97	87.500	Tetraodon_nigroviridis
ENSOMEG00000020254	-	72	83.732	ENSXCOG00000004225	-	89	82.775	Xiphophorus_couchianus
ENSOMEG00000020254	-	100	92.205	ENSXMAG00000013412	-	100	91.445	Xiphophorus_maculatus