EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000020594 (Gene tree)
Gene ID: 112150009
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein Rab-1B-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 7115 bases
Position: chrNVQA01000013.1:26426709-26433823
Accession: 112150009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000018842	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000027888	-	312	-	ENSOMEP00000018835	103 (aa)	-	-
ENSOMET00000027913	-	3859	-	ENSOMEP00000018842	214 (aa)	XP_024133816	UPI000CF7F37B

Gene Model

Click here to download ENSOMEG00000020594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000020594's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000020594	zgc:171927	80	43.931	ENSOMEG00000020418	rab42a	79	43.931
ENSOMEG00000020594	zgc:171927	56	30.833	ENSOMEG00000023857	arl8bb	66	30.833
ENSOMEG00000020594	zgc:171927	72	52.903	ENSOMEG00000020605	rab18a	75	52.903
ENSOMEG00000020594	zgc:171927	70	43.871	ENSOMEG00000021726	-	64	43.871
ENSOMEG00000020594	zgc:171927	76	43.558	ENSOMEG00000023078	rab5c	81	42.614
ENSOMEG00000020594	zgc:171927	91	41.379	ENSOMEG00000003623	rab14	93	41.379
ENSOMEG00000020594	zgc:171927	77	38.182	ENSOMEG00000011273	kras	91	37.572
ENSOMEG00000020594	zgc:171927	72	37.736	ENSOMEG00000009701	RAB9A	80	37.736
ENSOMEG00000020594	zgc:171927	83	40.331	ENSOMEG00000017958	si:dkey-34d22.5	82	40.331
ENSOMEG00000020594	zgc:171927	79	49.112	ENSOMEG00000016752	rab2a	80	49.112
ENSOMEG00000020594	zgc:171927	76	36.585	ENSOMEG00000018719	hrasb	86	36.585
ENSOMEG00000020594	zgc:171927	79	54.167	ENSOMEG00000017467	rab11a	78	54.167
ENSOMEG00000020594	zgc:171927	76	33.537	ENSOMEG00000013685	rheb	88	33.537
ENSOMEG00000020594	zgc:171927	72	50.968	ENSOMEG00000007546	rab18b	75	50.968
ENSOMEG00000020594	zgc:171927	79	44.444	ENSOMEG00000006333	RAB39B	80	44.444
ENSOMEG00000020594	zgc:171927	98	42.654	ENSOMEG00000010510	rab25a	96	42.654
ENSOMEG00000020594	zgc:171927	99	45.972	ENSOMEG00000002581	rab11ba	96	45.972
ENSOMEG00000020594	zgc:171927	79	49.704	ENSOMEG00000022002	rab15	79	49.704
ENSOMEG00000020594	zgc:171927	76	41.317	ENSOMEG00000017306	rab33a	61	41.317
ENSOMEG00000020594	zgc:171927	72	37.107	ENSOMEG00000000162	rab9a	79	37.107
ENSOMEG00000020594	zgc:171927	99	45.972	ENSOMEG00000017806	-	96	45.972
ENSOMEG00000020594	zgc:171927	79	42.690	ENSOMEG00000017881	-	80	42.690
ENSOMEG00000020594	zgc:171927	97	34.123	ENSOMEG00000017263	-	96	34.123
ENSOMEG00000020594	zgc:171927	100	42.991	ENSOMEG00000019462	RAB15	99	42.991
ENSOMEG00000020594	zgc:171927	93	74.747	ENSOMEG00000009074	-	98	74.747
ENSOMEG00000020594	zgc:171927	100	50.000	ENSOMEG00000008210	rab13	98	52.709
ENSOMEG00000020594	zgc:171927	80	45.506	ENSOMEG00000013128	zgc:101559	76	45.506
ENSOMEG00000020594	zgc:171927	96	35.922	ENSOMEG00000017258	RAB41	91	35.922
ENSOMEG00000020594	zgc:171927	99	45.972	ENSOMEG00000002562	-	96	45.972
ENSOMEG00000020594	zgc:171927	72	38.608	ENSOMEG00000023716	opn1sw2	77	38.608
ENSOMEG00000020594	zgc:171927	77	38.462	ENSOMEG00000010156	-	82	38.462
ENSOMEG00000020594	zgc:171927	77	33.136	ENSOMEG00000000336	RAB29	84	33.136
ENSOMEG00000020594	zgc:171927	76	44.512	ENSOMEG00000018494	-	67	44.512
ENSOMEG00000020594	zgc:171927	84	38.333	ENSOMEG00000004379	-	83	38.333
ENSOMEG00000020594	zgc:171927	71	30.189	ENSOMEG00000001959	arl8ba	81	30.189
ENSOMEG00000020594	zgc:171927	96	39.806	ENSOMEG00000009290	-	93	39.806
ENSOMEG00000020594	zgc:171927	99	45.498	ENSOMEG00000020271	rab11al	96	45.498
ENSOMEG00000020594	zgc:171927	88	38.614	ENSOMEG00000019819	rab33ba	83	38.614
ENSOMEG00000020594	zgc:171927	86	36.082	ENSOMEG00000008327	rab9b	89	36.082
ENSOMEG00000020594	zgc:171927	58	31.061	ENSOMEG00000004308	arl4d	65	31.061
ENSOMEG00000020594	zgc:171927	89	31.414	ENSOMEG00000009463	rhebl1	97	31.414
ENSOMEG00000020594	zgc:171927	83	36.313	ENSOMEG00000001706	rab23	87	36.517
ENSOMEG00000020594	zgc:171927	76	45.399	ENSOMEG00000010692	rab5aa	75	45.399
ENSOMEG00000020594	zgc:171927	81	38.728	ENSOMEG00000023625	rab6bb	83	38.509
ENSOMEG00000020594	zgc:171927	86	31.183	ENSOMEG00000000343	rras	92	31.720
ENSOMEG00000020594	zgc:171927	85	37.912	ENSOMEG00000014206	rab6ba	84	37.912
ENSOMEG00000020594	zgc:171927	55	30.833	ENSOMEG00000003868	arl4aa	62	30.833
ENSOMEG00000020594	zgc:171927	98	41.429	ENSOMEG00000020350	rab25b	96	41.667
ENSOMEG00000020594	zgc:171927	76	59.877	ENSOMEG00000015474	si:dkey-16l2.16	78	59.509
ENSOMEG00000020594	zgc:171927	74	39.752	ENSOMEG00000010334	rab34b	66	39.752
ENSOMEG00000020594	zgc:171927	88	78.191	ENSOMEG00000006036	rab1ab	93	78.191
ENSOMEG00000020594	zgc:171927	74	38.509	ENSOMEG00000003647	rab34a	53	38.509
ENSOMEG00000020594	zgc:171927	73	35.849	ENSOMEG00000008576	rabl2	70	35.849
ENSOMEG00000020594	zgc:171927	72	37.179	ENSOMEG00000011584	pth2r	65	37.179
ENSOMEG00000020594	zgc:171927	76	39.024	ENSOMEG00000016685	zgc:55558	87	39.024
ENSOMEG00000020594	zgc:171927	80	46.512	ENSOMEG00000008191	rab12	71	46.512
ENSOMEG00000020594	zgc:171927	99	47.393	ENSOMEG00000001613	rab30	97	47.393

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000020594	zgc:171927	100	93.458	ENSAPOG00000004980	-	100	93.458	Acanthochromis_polyacanthus
ENSOMEG00000020594	zgc:171927	100	92.056	ENSACIG00000009006	zgc:171927	100	92.056	Amphilophus_citrinellus
ENSOMEG00000020594	zgc:171927	71	88.387	ENSAOCG00000013808	-	93	97.521	Amphiprion_ocellaris
ENSOMEG00000020594	zgc:171927	100	91.589	ENSAOCG00000024149	-	100	91.589	Amphiprion_ocellaris
ENSOMEG00000020594	zgc:171927	100	92.056	ENSAPEG00000022171	zgc:171927	99	92.056	Amphiprion_percula
ENSOMEG00000020594	zgc:171927	100	92.056	ENSATEG00000003430	zgc:171927	100	92.056	Anabas_testudineus
ENSOMEG00000020594	zgc:171927	100	90.654	ENSACLG00000013734	-	100	90.654	Astatotilapia_calliptera
ENSOMEG00000020594	zgc:171927	100	79.070	ENSAMXG00000039486	zgc:171927	100	79.070	Astyanax_mexicanus
ENSOMEG00000020594	zgc:171927	100	88.318	ENSCSEG00000014416	zgc:171927	100	88.318	Cynoglossus_semilaevis
ENSOMEG00000020594	zgc:171927	100	92.056	ENSCVAG00000009222	zgc:171927	100	92.056	Cyprinodon_variegatus
ENSOMEG00000020594	zgc:171927	100	78.605	ENSDARG00000033056	zgc:171927	100	78.605	Danio_rerio
ENSOMEG00000020594	zgc:171927	94	82.178	ENSELUG00000011680	zgc:171927	99	79.070	Esox_lucius
ENSOMEG00000020594	zgc:171927	100	92.523	ENSFHEG00000022176	zgc:171927	100	92.523	Fundulus_heteroclitus
ENSOMEG00000020594	zgc:171927	98	80.569	ENSGMOG00000004979	-	97	80.569	Gadus_morhua
ENSOMEG00000020594	zgc:171927	98	90.909	ENSGAFG00000015702	zgc:171927	84	90.909	Gambusia_affinis
ENSOMEG00000020594	zgc:171927	100	90.654	ENSGACG00000013401	zgc:171927	99	90.654	Gasterosteus_aculeatus
ENSOMEG00000020594	zgc:171927	100	90.654	ENSHBUG00000002397	-	100	90.654	Haplochromis_burtoni
ENSOMEG00000020594	zgc:171927	100	91.121	ENSKMAG00000009856	zgc:171927	100	91.121	Kryptolebias_marmoratus
ENSOMEG00000020594	zgc:171927	100	89.252	ENSLBEG00000005791	-	100	89.252	Labrus_bergylta
ENSOMEG00000020594	zgc:171927	98	88.517	ENSLBEG00000027226	-	89	88.517	Labrus_bergylta
ENSOMEG00000020594	zgc:171927	98	72.857	ENSLOCG00000014692	zgc:171927	96	72.857	Lepisosteus_oculatus
ENSOMEG00000020594	zgc:171927	100	88.785	ENSMAMG00000020135	zgc:171927	100	88.785	Mastacembelus_armatus
ENSOMEG00000020594	zgc:171927	100	90.654	ENSMZEG00005024685	-	100	90.654	Maylandia_zebra
ENSOMEG00000020594	zgc:171927	100	86.449	ENSMMOG00000009833	-	100	86.449	Mola_mola
ENSOMEG00000020594	zgc:171927	100	90.187	ENSMALG00000021129	zgc:171927	100	90.187	Monopterus_albus
ENSOMEG00000020594	zgc:171927	100	90.187	ENSNBRG00000006202	zgc:171927	100	90.187	Neolamprologus_brichardi
ENSOMEG00000020594	zgc:171927	100	94.393	ENSORLG00000000602	zgc:171927	100	94.393	Oryzias_latipes
ENSOMEG00000020594	zgc:171927	100	94.393	ENSORLG00020021071	zgc:171927	100	94.393	Oryzias_latipes_hni
ENSOMEG00000020594	zgc:171927	100	93.925	ENSORLG00015010098	zgc:171927	100	93.925	Oryzias_latipes_hsok
ENSOMEG00000020594	zgc:171927	100	91.121	ENSPFOG00000013810	zgc:171927	99	91.121	Poecilia_formosa
ENSOMEG00000020594	zgc:171927	100	91.121	ENSPLAG00000005869	zgc:171927	100	91.121	Poecilia_latipinna
ENSOMEG00000020594	zgc:171927	100	91.121	ENSPMEG00000022350	zgc:171927	100	91.121	Poecilia_mexicana
ENSOMEG00000020594	zgc:171927	100	92.056	ENSPREG00000017517	zgc:171927	100	92.056	Poecilia_reticulata
ENSOMEG00000020594	zgc:171927	100	90.654	ENSPNYG00000007520	-	100	90.654	Pundamilia_nyererei
ENSOMEG00000020594	zgc:171927	100	79.070	ENSPNAG00000029574	zgc:171927	100	79.070	Pygocentrus_nattereri
ENSOMEG00000020594	zgc:171927	100	78.605	ENSSFOG00015005464	zgc:171927	99	78.605	Scleropages_formosus
ENSOMEG00000020594	zgc:171927	100	89.720	ENSSMAG00000004416	-	100	89.720	Scophthalmus_maximus
ENSOMEG00000020594	zgc:171927	100	92.056	ENSSDUG00000004445	zgc:171927	100	92.056	Seriola_dumerili
ENSOMEG00000020594	zgc:171927	100	92.056	ENSSLDG00000018024	zgc:171927	100	92.056	Seriola_lalandi_dorsalis
ENSOMEG00000020594	zgc:171927	100	92.991	ENSSPAG00000013533	zgc:171927	100	92.991	Stegastes_partitus
ENSOMEG00000020594	zgc:171927	100	92.523	ENSXCOG00000010695	zgc:171927	100	92.523	Xiphophorus_couchianus
ENSOMEG00000020594	zgc:171927	100	92.523	ENSXMAG00000004683	zgc:171927	100	92.523	Xiphophorus_maculatus