EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000020690 (Gene tree)
Gene ID: -
Gene Symbol: srsf5b
Alias: -
Full Name: serine/arginine-rich splicing factor 5b
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 5693 bases
Position: chrNVQA01005953.1:131333-137025
Accession: ZDB-GENE-040718-354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000018919	RRM_1	PF00076.22	1.3e-31	1	2
ENSOMEP00000018919	RRM_1	PF00076.22	1.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000035463	-	1220	-	ENSOMEP00000018919	403 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000020690's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000020690's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000020690	srsf5b	67	91.078	ENSAPOG00000008642	srsf5b	93	91.176	Acanthochromis_polyacanthus
ENSOMEG00000020690	srsf5b	67	89.668	ENSACIG00000010742	srsf5b	93	89.781	Amphilophus_citrinellus
ENSOMEG00000020690	srsf5b	67	90.706	ENSAOCG00000005719	srsf5b	93	90.809	Amphiprion_ocellaris
ENSOMEG00000020690	srsf5b	67	90.706	ENSAPEG00000007830	srsf5b	93	90.809	Amphiprion_percula
ENSOMEG00000020690	srsf5b	67	89.259	ENSATEG00000019112	srsf5b	93	89.011	Anabas_testudineus
ENSOMEG00000020690	srsf5b	67	89.668	ENSACLG00000026424	srsf5b	93	89.781	Astatotilapia_calliptera
ENSOMEG00000020690	srsf5b	62	90.323	ENSCSEG00000003801	srsf5b	93	87.085	Cynoglossus_semilaevis
ENSOMEG00000020690	srsf5b	67	77.320	ENSCVAG00000017240	srsf5b	89	82.877	Cyprinodon_variegatus
ENSOMEG00000020690	srsf5b	67	69.637	ENSELUG00000019852	srsf5b	85	84.722	Esox_lucius
ENSOMEG00000020690	srsf5b	67	88.000	ENSFHEG00000009476	srsf5b	89	89.130	Fundulus_heteroclitus
ENSOMEG00000020690	srsf5b	67	89.630	ENSGAFG00000002865	srsf5b	90	90.110	Gambusia_affinis
ENSOMEG00000020690	srsf5b	67	89.299	ENSHBUG00000012462	srsf5b	93	95.385	Haplochromis_burtoni
ENSOMEG00000020690	srsf5b	67	89.668	ENSKMAG00000020486	srsf5b	90	89.781	Kryptolebias_marmoratus
ENSOMEG00000020690	srsf5b	67	89.668	ENSLBEG00000013647	srsf5b	93	89.781	Labrus_bergylta
ENSOMEG00000020690	srsf5b	61	91.498	ENSMAMG00000002673	srsf5b	93	89.051	Mastacembelus_armatus
ENSOMEG00000020690	srsf5b	67	89.668	ENSMZEG00005003550	srsf5b	93	89.781	Maylandia_zebra
ENSOMEG00000020690	srsf5b	67	86.447	ENSMALG00000021875	srsf5b	93	88.406	Monopterus_albus
ENSOMEG00000020690	srsf5b	67	86.716	ENSNBRG00000001285	srsf5b	93	89.416	Neolamprologus_brichardi
ENSOMEG00000020690	srsf5b	67	89.668	ENSONIG00000005759	srsf5b	93	89.781	Oreochromis_niloticus
ENSOMEG00000020690	srsf5b	67	84.848	ENSORLG00000029854	srsf5b	93	83.333	Oryzias_latipes
ENSOMEG00000020690	srsf5b	67	94.834	ENSORLG00015001720	srsf5b	94	94.891	Oryzias_latipes_hsok
ENSOMEG00000020690	srsf5b	67	90.370	ENSPFOG00000017700	srsf5b	90	90.476	Poecilia_formosa
ENSOMEG00000020690	srsf5b	67	90.741	ENSPLAG00000006480	srsf5b	90	90.842	Poecilia_latipinna
ENSOMEG00000020690	srsf5b	67	90.370	ENSPMEG00000012751	srsf5b	90	90.476	Poecilia_mexicana
ENSOMEG00000020690	srsf5b	67	89.630	ENSPREG00000010381	srsf5b	90	90.110	Poecilia_reticulata
ENSOMEG00000020690	srsf5b	67	81.181	ENSPNYG00000002669	srsf5b	94	95.385	Pundamilia_nyererei
ENSOMEG00000020690	srsf5b	67	80.268	ENSSMAG00000019728	srsf5b	92	81.940	Scophthalmus_maximus
ENSOMEG00000020690	srsf5b	65	89.734	ENSSDUG00000005766	srsf5b	92	90.494	Seriola_dumerili
ENSOMEG00000020690	srsf5b	67	89.299	ENSSLDG00000023255	srsf5b	93	90.146	Seriola_lalandi_dorsalis
ENSOMEG00000020690	srsf5b	67	91.822	ENSSPAG00000015325	srsf5b	93	91.912	Stegastes_partitus
ENSOMEG00000020690	srsf5b	68	77.739	ENSTNIG00000016411	srsf5b	95	71.080	Tetraodon_nigroviridis
ENSOMEG00000020690	srsf5b	67	81.111	ENSXCOG00000001570	srsf5b	90	87.546	Xiphophorus_couchianus
ENSOMEG00000020690	srsf5b	67	90.741	ENSXMAG00000026416	srsf5b	90	90.842	Xiphophorus_maculatus