EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000020811 (Gene tree)
Gene ID: 112156716
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 17974 bases
Position: chrNVQA01000021.1:244825-262798
Accession: ZDB-GENE-050522-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000019018	KH_1	PF00013.29	1.5e-48	1	3
ENSOMEP00000019018	KH_1	PF00013.29	1.5e-48	2	3
ENSOMEP00000019018	KH_1	PF00013.29	1.5e-48	3	3
ENSOMEP00000019018	KH_2	PF07650.17	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000028145	-	870	-	ENSOMEP00000019018	289 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000020811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000020811's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000020811	pcbp3	99	74.150	ENSOMEG00000005759	pcbp2	90	74.150
ENSOMEG00000020811	pcbp3	79	38.202	ENSOMEG00000021943	fubp1	55	38.202
ENSOMEG00000020811	pcbp3	80	55.556	ENSOMEG00000023618	hnrnpk	52	55.556
ENSOMEG00000020811	pcbp3	70	40.323	ENSOMEG00000013233	khsrp	52	39.683
ENSOMEG00000020811	pcbp3	99	36.047	ENSOMEG00000007725	-	65	36.047
ENSOMEG00000020811	pcbp3	97	72.281	ENSOMEG00000015459	-	69	72.281
ENSOMEG00000020811	pcbp3	96	78.700	ENSOMEG00000019014	PCBP2	91	78.700
ENSOMEG00000020811	pcbp3	97	60.328	ENSOMEG00000011545	-	66	60.328
ENSOMEG00000020811	pcbp3	97	40.299	ENSOMEG00000015479	nova1	52	40.299
ENSOMEG00000020811	pcbp3	93	41.071	ENSOMEG00000001908	igf2bp2b	62	33.784
ENSOMEG00000020811	pcbp3	97	62.278	ENSOMEG00000003516	-	68	56.803
ENSOMEG00000020811	pcbp3	97	39.062	ENSOMEG00000004190	fubp3	60	39.062
ENSOMEG00000020811	pcbp3	99	94.138	ENSOMEG00000020162	-	95	94.138

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000020811	pcbp3	96	99.640	ENSAPOG00000020003	pcbp3	79	99.640	Acanthochromis_polyacanthus
ENSOMEG00000020811	pcbp3	97	96.441	ENSAPOG00000016582	-	90	96.441	Acanthochromis_polyacanthus
ENSOMEG00000020811	pcbp3	99	87.379	ENSAMEG00000001697	-	96	83.025	Ailuropoda_melanoleuca
ENSOMEG00000020811	pcbp3	96	92.027	ENSACIG00000010933	pcbp3	88	92.027	Amphilophus_citrinellus
ENSOMEG00000020811	pcbp3	99	92.881	ENSACIG00000002739	-	91	92.881	Amphilophus_citrinellus
ENSOMEG00000020811	pcbp3	96	91.753	ENSAOCG00000007806	-	99	91.753	Amphiprion_ocellaris
ENSOMEG00000020811	pcbp3	99	97.902	ENSAOCG00000008592	-	95	97.902	Amphiprion_ocellaris
ENSOMEG00000020811	pcbp3	97	90.523	ENSAPEG00000008011	pcbp3	91	90.523	Amphiprion_percula
ENSOMEG00000020811	pcbp3	98	96.154	ENSAPEG00000005209	-	90	96.154	Amphiprion_percula
ENSOMEG00000020811	pcbp3	99	95.502	ENSATEG00000009833	-	91	95.502	Anabas_testudineus
ENSOMEG00000020811	pcbp3	96	92.027	ENSATEG00000015787	-	93	92.027	Anabas_testudineus
ENSOMEG00000020811	pcbp3	97	74.695	ENSAPLG00000008951	-	77	74.695	Anas_platyrhynchos
ENSOMEG00000020811	pcbp3	99	88.816	ENSAPLG00000002975	-	95	88.816	Anas_platyrhynchos
ENSOMEG00000020811	pcbp3	99	81.381	ENSACAG00000004607	-	96	81.381	Anolis_carolinensis
ENSOMEG00000020811	pcbp3	99	80.192	ENSACAG00000009819	-	95	80.192	Anolis_carolinensis
ENSOMEG00000020811	pcbp3	99	76.562	ENSANAG00000030702	-	95	95.595	Aotus_nancymaae
ENSOMEG00000020811	pcbp3	97	90.196	ENSACLG00000011835	pcbp3	91	90.196	Astatotilapia_calliptera
ENSOMEG00000020811	pcbp3	99	94.138	ENSACLG00000003801	-	95	94.138	Astatotilapia_calliptera
ENSOMEG00000020811	pcbp3	97	89.145	ENSAMXG00000003440	pcbp3	87	89.145	Astyanax_mexicanus
ENSOMEG00000020811	pcbp3	96	94.245	ENSAMXG00000013588	-	92	94.245	Astyanax_mexicanus
ENSOMEG00000020811	pcbp3	92	69.863	ENSAMXG00000001760	zgc:110045	66	69.863	Astyanax_mexicanus
ENSOMEG00000020811	pcbp3	91	94.203	ENSCAFG00020019472	-	79	94.203	Canis_lupus_dingo
ENSOMEG00000020811	pcbp3	99	93.103	ENSCSAG00000007440	-	87	93.103	Chlorocebus_sabaeus
ENSOMEG00000020811	pcbp3	97	95.018	ENSCPBG00000012151	-	96	87.419	Chrysemys_picta_bellii
ENSOMEG00000020811	pcbp3	97	80.858	ENSCPBG00000000733	-	70	80.858	Chrysemys_picta_bellii
ENSOMEG00000020811	pcbp3	96	98.201	ENSCSEG00000000822	pcbp3	91	98.201	Cynoglossus_semilaevis
ENSOMEG00000020811	pcbp3	98	77.316	ENSCSEG00000016984	-	92	77.316	Cynoglossus_semilaevis
ENSOMEG00000020811	pcbp3	97	90.196	ENSCVAG00000014482	pcbp3	91	90.196	Cyprinodon_variegatus
ENSOMEG00000020811	pcbp3	99	95.139	ENSCVAG00000005262	-	90	95.139	Cyprinodon_variegatus
ENSOMEG00000020811	pcbp3	99	88.179	ENSDARG00000054378	pcbp3	95	88.179	Danio_rerio
ENSOMEG00000020811	pcbp3	98	81.469	ENSETEG00000015988	-	90	81.469	Echinops_telfairi
ENSOMEG00000020811	pcbp3	92	75.000	ENSEBUG00000016192	pcbp3	99	75.000	Eptatretus_burgeri
ENSOMEG00000020811	pcbp3	97	79.298	ENSEBUG00000007485	-	83	79.293	Eptatretus_burgeri
ENSOMEG00000020811	pcbp3	93	72.500	ENSEBUG00000005495	pcbp3	65	72.500	Eptatretus_burgeri
ENSOMEG00000020811	pcbp3	96	92.143	ENSELUG00000003521	pcbp3	90	90.164	Esox_lucius
ENSOMEG00000020811	pcbp3	97	96.441	ENSELUG00000001560	-	82	96.441	Esox_lucius
ENSOMEG00000020811	pcbp3	99	92.759	ENSFALG00000003949	-	95	92.759	Ficedula_albicollis
ENSOMEG00000020811	pcbp3	97	74.695	ENSFALG00000004411	-	72	74.695	Ficedula_albicollis
ENSOMEG00000020811	pcbp3	96	99.281	ENSFHEG00000016615	pcbp3	87	99.281	Fundulus_heteroclitus
ENSOMEG00000020811	pcbp3	99	95.486	ENSFHEG00000006539	-	90	95.486	Fundulus_heteroclitus
ENSOMEG00000020811	pcbp3	97	69.637	ENSGMOG00000008611	-	92	69.637	Gadus_morhua
ENSOMEG00000020811	pcbp3	96	79.734	ENSGMOG00000011992	pcbp3	92	79.801	Gadus_morhua
ENSOMEG00000020811	pcbp3	98	80.656	ENSGALG00000013155	-	92	81.667	Gallus_gallus
ENSOMEG00000020811	pcbp3	98	81.515	ENSGALG00000004394	-	98	89.130	Gallus_gallus
ENSOMEG00000020811	pcbp3	97	96.085	ENSGAFG00000010274	-	90	96.085	Gambusia_affinis
ENSOMEG00000020811	pcbp3	95	92.256	ENSGAFG00000011430	pcbp3	86	92.256	Gambusia_affinis
ENSOMEG00000020811	pcbp3	98	79.385	ENSGACG00000014955	-	93	79.385	Gasterosteus_aculeatus
ENSOMEG00000020811	pcbp3	97	89.298	ENSGACG00000002266	-	92	89.298	Gasterosteus_aculeatus
ENSOMEG00000020811	pcbp3	92	88.390	ENSGAGG00000000271	-	100	88.390	Gopherus_agassizii
ENSOMEG00000020811	pcbp3	72	96.689	ENSGAGG00000006956	-	63	96.689	Gopherus_agassizii
ENSOMEG00000020811	pcbp3	99	94.138	ENSHBUG00000021782	-	95	94.138	Haplochromis_burtoni
ENSOMEG00000020811	pcbp3	96	99.278	ENSHBUG00000010697	pcbp3	88	99.278	Haplochromis_burtoni
ENSOMEG00000020811	pcbp3	97	90.492	ENSHCOG00000017868	pcbp3	91	90.492	Hippocampus_comes
ENSOMEG00000020811	pcbp3	97	91.103	ENSHCOG00000006067	-	92	91.103	Hippocampus_comes
ENSOMEG00000020811	pcbp3	98	95.470	ENSIPUG00000006238	pcbp3	92	95.470	Ictalurus_punctatus
ENSOMEG00000020811	pcbp3	97	90.523	ENSKMAG00000003046	pcbp3	91	90.523	Kryptolebias_marmoratus
ENSOMEG00000020811	pcbp3	97	95.730	ENSKMAG00000018530	-	90	95.730	Kryptolebias_marmoratus
ENSOMEG00000020811	pcbp3	98	80.756	ENSLBEG00000006542	-	89	80.756	Labrus_bergylta
ENSOMEG00000020811	pcbp3	95	99.636	ENSLBEG00000006201	pcbp3	86	99.636	Labrus_bergylta
ENSOMEG00000020811	pcbp3	97	75.077	ENSLACG00000010804	zgc:110045	72	75.077	Latimeria_chalumnae
ENSOMEG00000020811	pcbp3	96	81.424	ENSLACG00000010386	pcbp3	72	81.424	Latimeria_chalumnae
ENSOMEG00000020811	pcbp3	96	81.000	ENSLOCG00000005058	zgc:110045	77	81.000	Lepisosteus_oculatus
ENSOMEG00000020811	pcbp3	99	87.419	ENSLOCG00000009369	pcbp3	96	87.419	Lepisosteus_oculatus
ENSOMEG00000020811	pcbp3	98	98.227	ENSMAMG00000022336	pcbp3	87	98.227	Mastacembelus_armatus
ENSOMEG00000020811	pcbp3	99	94.464	ENSMAMG00000011620	-	91	94.464	Mastacembelus_armatus
ENSOMEG00000020811	pcbp3	96	92.000	ENSMZEG00005008993	pcbp3	90	89.869	Maylandia_zebra
ENSOMEG00000020811	pcbp3	96	88.235	ENSMZEG00005014882	-	88	88.927	Maylandia_zebra
ENSOMEG00000020811	pcbp3	97	74.695	ENSMGAG00000006794	-	72	74.695	Meleagris_gallopavo
ENSOMEG00000020811	pcbp3	98	77.469	ENSMGAG00000001883	-	93	77.778	Meleagris_gallopavo
ENSOMEG00000020811	pcbp3	96	99.639	ENSMMOG00000000730	pcbp3	78	99.639	Mola_mola
ENSOMEG00000020811	pcbp3	98	95.122	ENSMMOG00000005216	-	92	95.122	Mola_mola
ENSOMEG00000020811	pcbp3	79	76.168	ENSMODG00000027884	-	93	76.168	Monodelphis_domestica
ENSOMEG00000020811	pcbp3	96	91.694	ENSMALG00000000691	pcbp3	88	91.694	Monopterus_albus
ENSOMEG00000020811	pcbp3	93	87.847	ENSMPUG00000001779	-	79	87.847	Mustela_putorius_furo
ENSOMEG00000020811	pcbp3	96	88.927	ENSNBRG00000016714	-	93	86.139	Neolamprologus_brichardi
ENSOMEG00000020811	pcbp3	96	91.362	ENSNBRG00000016409	-	88	91.362	Neolamprologus_brichardi
ENSOMEG00000020811	pcbp3	97	81.677	ENSOPRG00000003431	-	93	81.677	Ochotona_princeps
ENSOMEG00000020811	pcbp3	99	94.138	ENSONIG00000004611	-	95	94.138	Oreochromis_niloticus
ENSOMEG00000020811	pcbp3	99	84.146	ENSONIG00000012122	-	94	84.146	Oreochromis_niloticus
ENSOMEG00000020811	pcbp3	99	92.414	ENSOCUG00000002696	-	87	92.414	Oryctolagus_cuniculus
ENSOMEG00000020811	pcbp3	97	98.577	ENSORLG00000000059	pcbp3	95	98.577	Oryzias_latipes
ENSOMEG00000020811	pcbp3	99	94.483	ENSORLG00000022739	-	95	94.483	Oryzias_latipes
ENSOMEG00000020811	pcbp3	99	94.138	ENSORLG00020006124	-	95	94.138	Oryzias_latipes_hni
ENSOMEG00000020811	pcbp3	100	98.616	ENSORLG00020012671	pcbp3	95	98.616	Oryzias_latipes_hni
ENSOMEG00000020811	pcbp3	97	96.085	ENSORLG00015008051	-	90	96.085	Oryzias_latipes_hsok
ENSOMEG00000020811	pcbp3	100	98.616	ENSORLG00015000429	pcbp3	95	98.616	Oryzias_latipes_hsok
ENSOMEG00000020811	pcbp3	97	80.428	ENSOGAG00000008044	-	93	80.428	Otolemur_garnettii
ENSOMEG00000020811	pcbp3	96	97.826	ENSPKIG00000019329	pcbp3	90	96.085	Paramormyrops_kingsleyae
ENSOMEG00000020811	pcbp3	77	87.349	ENSPKIG00000020913	-	74	87.349	Paramormyrops_kingsleyae
ENSOMEG00000020811	pcbp3	99	78.827	ENSPSIG00000014970	-	95	79.479	Pelodiscus_sinensis
ENSOMEG00000020811	pcbp3	76	80.328	ENSPSIG00000008350	-	67	80.328	Pelodiscus_sinensis
ENSOMEG00000020811	pcbp3	97	90.759	ENSPMGG00000022383	pcbp3	91	90.759	Periophthalmus_magnuspinnatus
ENSOMEG00000020811	pcbp3	97	73.427	ENSPMAG00000004551	pcbp3	82	73.427	Petromyzon_marinus
ENSOMEG00000020811	pcbp3	77	86.747	ENSPMAG00000004637	-	93	86.747	Petromyzon_marinus
ENSOMEG00000020811	pcbp3	99	86.262	ENSPCIG00000028092	-	96	86.262	Phascolarctos_cinereus
ENSOMEG00000020811	pcbp3	98	91.333	ENSPLAG00000004074	-	86	91.333	Poecilia_latipinna
ENSOMEG00000020811	pcbp3	95	86.667	ENSPLAG00000011449	pcbp3	80	86.667	Poecilia_latipinna
ENSOMEG00000020811	pcbp3	96	92.027	ENSPMEG00000021239	pcbp3	85	92.027	Poecilia_mexicana
ENSOMEG00000020811	pcbp3	98	88.055	ENSPMEG00000006653	-	93	87.821	Poecilia_mexicana
ENSOMEG00000020811	pcbp3	98	95.819	ENSPREG00000020585	-	92	95.819	Poecilia_reticulata
ENSOMEG00000020811	pcbp3	97	98.208	ENSPREG00000015736	pcbp3	91	98.208	Poecilia_reticulata
ENSOMEG00000020811	pcbp3	98	95.122	ENSPNYG00000013205	-	92	95.122	Pundamilia_nyererei
ENSOMEG00000020811	pcbp3	96	99.639	ENSPNYG00000012326	pcbp3	85	99.639	Pundamilia_nyererei
ENSOMEG00000020811	pcbp3	99	94.828	ENSPNAG00000015104	pcbp3	90	94.828	Pygocentrus_nattereri
ENSOMEG00000020811	pcbp3	96	94.928	ENSPNAG00000008541	-	90	94.928	Pygocentrus_nattereri
ENSOMEG00000020811	pcbp3	99	93.103	ENSRNOG00000001245	Pcbp3	95	93.103	Rattus_norvegicus
ENSOMEG00000020811	pcbp3	99	85.714	ENSRBIG00000028177	-	81	85.714	Rhinopithecus_bieti
ENSOMEG00000020811	pcbp3	99	86.774	ENSSHAG00000007890	-	96	86.774	Sarcophilus_harrisii
ENSOMEG00000020811	pcbp3	97	87.829	ENSSFOG00015014706	pcbp3	87	87.829	Scleropages_formosus
ENSOMEG00000020811	pcbp3	97	85.409	ENSSFOG00015007118	-	86	85.409	Scleropages_formosus
ENSOMEG00000020811	pcbp3	97	96.441	ENSSFOG00015010205	pcbp3	90	96.441	Scleropages_formosus
ENSOMEG00000020811	pcbp3	99	94.138	ENSSMAG00000003135	-	95	94.138	Scophthalmus_maximus
ENSOMEG00000020811	pcbp3	98	98.582	ENSSMAG00000011929	pcbp3	91	98.582	Scophthalmus_maximus
ENSOMEG00000020811	pcbp3	96	91.089	ENSSDUG00000011608	pcbp3	92	91.089	Seriola_dumerili
ENSOMEG00000020811	pcbp3	97	91.844	ENSSDUG00000008502	-	91	87.770	Seriola_dumerili
ENSOMEG00000020811	pcbp3	96	91.089	ENSSLDG00000008518	pcbp3	92	91.089	Seriola_lalandi_dorsalis
ENSOMEG00000020811	pcbp3	97	96.441	ENSSLDG00000020161	-	90	96.441	Seriola_lalandi_dorsalis
ENSOMEG00000020811	pcbp3	93	80.756	ENSSPUG00000013214	-	92	80.756	Sphenodon_punctatus
ENSOMEG00000020811	pcbp3	96	91.753	ENSSPAG00000004190	-	99	91.753	Stegastes_partitus
ENSOMEG00000020811	pcbp3	96	79.333	ENSSPAG00000023341	-	85	79.333	Stegastes_partitus
ENSOMEG00000020811	pcbp3	94	88.136	ENSTGUG00000003316	-	87	88.136	Taeniopygia_guttata
ENSOMEG00000020811	pcbp3	99	86.207	ENSTGUG00000008158	-	96	86.207	Taeniopygia_guttata
ENSOMEG00000020811	pcbp3	98	95.804	ENSTRUG00000006280	-	91	95.804	Takifugu_rubripes
ENSOMEG00000020811	pcbp3	96	95.189	ENSTRUG00000013604	pcbp3	86	95.189	Takifugu_rubripes
ENSOMEG00000020811	pcbp3	99	79.880	ENSTTRG00000015075	-	93	80.864	Tursiops_truncatus
ENSOMEG00000020811	pcbp3	97	74.390	ENSXETG00000010491	pcbp2	72	74.390	Xenopus_tropicalis
ENSOMEG00000020811	pcbp3	99	86.129	ENSXETG00000011483	pcbp1	96	86.129	Xenopus_tropicalis
ENSOMEG00000020811	pcbp3	96	92.027	ENSXCOG00000020481	pcbp3	85	92.027	Xiphophorus_couchianus
ENSOMEG00000020811	pcbp3	97	90.523	ENSXMAG00000008175	pcbp3	91	90.523	Xiphophorus_maculatus
ENSOMEG00000020811	pcbp3	97	96.441	ENSXMAG00000028711	-	90	96.441	Xiphophorus_maculatus