EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000020941 (Gene tree)
Gene ID: 112138592
Gene Symbol: prpf4
Alias: -
Full Name: PRP4 pre-mRNA processing factor 4 homolog (yeast)
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 15966 bases
Position: chrNVQA01001358.1:14529-30494
Accession: ZDB-GENE-030131-5143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000019107	PRP4	PF08799.11	2.4e-14	1	1
ENSOMEP00000019119	PRP4	PF08799.11	2.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000028287	-	1503	-	ENSOMEP00000019119	500 (aa)	-	-
ENSOMET00000028270	-	1566	-	ENSOMEP00000019107	478 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000020941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000020941's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000020941	prpf4	56	30.457	ENSOMEG00000019834	POC1A	66	30.457
ENSOMEG00000020941	prpf4	60	32.308	ENSOMEG00000012684	tbl3	66	32.308
ENSOMEG00000020941	prpf4	56	35.484	ENSOMEG00000019366	wdr5	90	35.484
ENSOMEG00000020941	prpf4	58	30.894	ENSOMEG00000005028	wdr61	90	30.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000020941	prpf4	99	74.737	ENSG00000136875	PRPF4	96	74.737	Homo_sapiens
ENSOMEG00000020941	prpf4	100	89.648	ENSAPOG00000014132	prpf4	99	89.648	Acanthochromis_polyacanthus
ENSOMEG00000020941	prpf4	99	74.737	ENSAMEG00000013048	PRPF4	94	74.737	Ailuropoda_melanoleuca
ENSOMEG00000020941	prpf4	100	90.476	ENSACIG00000005579	prpf4	100	89.804	Amphilophus_citrinellus
ENSOMEG00000020941	prpf4	100	88.820	ENSAOCG00000005457	prpf4	100	88.431	Amphiprion_ocellaris
ENSOMEG00000020941	prpf4	100	88.613	ENSAPEG00000000776	prpf4	100	88.235	Amphiprion_percula
ENSOMEG00000020941	prpf4	100	89.027	ENSATEG00000023013	prpf4	100	88.627	Anabas_testudineus
ENSOMEG00000020941	prpf4	99	75.523	ENSAPLG00000006534	PRPF4	94	75.523	Anas_platyrhynchos
ENSOMEG00000020941	prpf4	99	74.274	ENSACAG00000015110	PRPF4	98	74.274	Anolis_carolinensis
ENSOMEG00000020941	prpf4	99	74.737	ENSANAG00000022464	PRPF4	93	74.737	Aotus_nancymaae
ENSOMEG00000020941	prpf4	100	91.097	ENSACLG00000019031	prpf4	100	90.392	Astatotilapia_calliptera
ENSOMEG00000020941	prpf4	100	60.305	ENSAMXG00000006756	prpf4	100	72.047	Astyanax_mexicanus
ENSOMEG00000020941	prpf4	99	74.737	ENSBTAG00000004571	PRPF4	96	74.737	Bos_taurus
ENSOMEG00000020941	prpf4	93	44.915	WBGene00007972	prp-4	95	44.915	Caenorhabditis_elegans
ENSOMEG00000020941	prpf4	99	74.737	ENSCJAG00000017856	PRPF4	96	74.737	Callithrix_jacchus
ENSOMEG00000020941	prpf4	99	74.737	ENSCAFG00000003224	PRPF4	93	74.737	Canis_familiaris
ENSOMEG00000020941	prpf4	99	74.737	ENSCAFG00020022637	PRPF4	97	74.737	Canis_lupus_dingo
ENSOMEG00000020941	prpf4	99	74.737	ENSCHIG00000024648	-	96	74.737	Capra_hircus
ENSOMEG00000020941	prpf4	99	74.947	ENSTSYG00000010366	PRPF4	96	74.947	Carlito_syrichta
ENSOMEG00000020941	prpf4	91	67.303	ENSCAPG00000008935	PRPF4	97	67.542	Cavia_aperea
ENSOMEG00000020941	prpf4	99	69.263	ENSCPOG00000014729	-	96	69.323	Cavia_porcellus
ENSOMEG00000020941	prpf4	99	74.316	ENSCPOG00000010747	-	96	74.316	Cavia_porcellus
ENSOMEG00000020941	prpf4	99	74.526	ENSCCAG00000028990	PRPF4	96	74.526	Cebus_capucinus
ENSOMEG00000020941	prpf4	99	74.737	ENSCATG00000021552	PRPF4	96	74.737	Cercocebus_atys
ENSOMEG00000020941	prpf4	99	74.947	ENSCLAG00000013448	PRPF4	96	74.947	Chinchilla_lanigera
ENSOMEG00000020941	prpf4	89	74.824	ENSCHOG00000007233	PRPF4	100	74.824	Choloepus_hoffmanni
ENSOMEG00000020941	prpf4	100	74.844	ENSCPBG00000019136	PRPF4	73	74.844	Chrysemys_picta_bellii
ENSOMEG00000020941	prpf4	97	60.446	ENSCING00000001299	-	95	60.446	Ciona_intestinalis
ENSOMEG00000020941	prpf4	99	58.546	ENSCSAVG00000009178	-	99	59.725	Ciona_savignyi
ENSOMEG00000020941	prpf4	99	74.737	ENSCANG00000003246	PRPF4	96	74.737	Colobus_angolensis_palliatus
ENSOMEG00000020941	prpf4	99	74.526	ENSCGRG00001016992	Prpf4	96	74.526	Cricetulus_griseus_chok1gshd
ENSOMEG00000020941	prpf4	99	74.526	ENSCGRG00000017560	Prpf4	96	74.526	Cricetulus_griseus_crigri
ENSOMEG00000020941	prpf4	100	86.221	ENSCSEG00000020451	prpf4	100	85.771	Cynoglossus_semilaevis
ENSOMEG00000020941	prpf4	100	77.963	ENSDARG00000067639	prpf4	100	77.756	Danio_rerio
ENSOMEG00000020941	prpf4	99	74.526	ENSDNOG00000013203	PRPF4	96	74.526	Dasypus_novemcinctus
ENSOMEG00000020941	prpf4	99	75.158	ENSDORG00000026275	Prpf4	96	75.158	Dipodomys_ordii
ENSOMEG00000020941	prpf4	100	49.526	FBgn0036733	U4-U6-60K	99	50.635	Drosophila_melanogaster
ENSOMEG00000020941	prpf4	99	75.158	ENSETEG00000020389	PRPF4	96	75.158	Echinops_telfairi
ENSOMEG00000020941	prpf4	99	68.182	ENSEBUG00000015229	prpf4	88	68.182	Eptatretus_burgeri
ENSOMEG00000020941	prpf4	99	74.737	ENSEASG00005022678	PRPF4	96	74.737	Equus_asinus_asinus
ENSOMEG00000020941	prpf4	99	74.737	ENSECAG00000007072	PRPF4	96	74.737	Equus_caballus
ENSOMEG00000020941	prpf4	84	79.079	ENSEEUG00000007480	PRPF4	95	59.404	Erinaceus_europaeus
ENSOMEG00000020941	prpf4	100	78.958	ENSELUG00000007510	prpf4	100	78.501	Esox_lucius
ENSOMEG00000020941	prpf4	99	74.737	ENSFCAG00000005514	PRPF4	96	74.737	Felis_catus
ENSOMEG00000020941	prpf4	99	74.150	ENSFALG00000005423	PRPF4	85	74.150	Ficedula_albicollis
ENSOMEG00000020941	prpf4	99	74.737	ENSFDAG00000005839	PRPF4	96	74.737	Fukomys_damarensis
ENSOMEG00000020941	prpf4	100	89.855	ENSFHEG00000001300	prpf4	100	89.216	Fundulus_heteroclitus
ENSOMEG00000020941	prpf4	99	75.314	ENSGALG00000008857	PRPF4	94	75.314	Gallus_gallus
ENSOMEG00000020941	prpf4	96	85.410	ENSGAFG00000012164	prpf4	68	85.410	Gambusia_affinis
ENSOMEG00000020941	prpf4	100	79.882	ENSGACG00000015476	prpf4	100	79.684	Gasterosteus_aculeatus
ENSOMEG00000020941	prpf4	100	74.428	ENSGAGG00000025029	PRPF4	94	74.428	Gopherus_agassizii
ENSOMEG00000020941	prpf4	99	74.737	ENSGGOG00000006943	PRPF4	96	74.737	Gorilla_gorilla
ENSOMEG00000020941	prpf4	100	91.097	ENSHBUG00000000562	prpf4	100	91.097	Haplochromis_burtoni
ENSOMEG00000020941	prpf4	95	64.565	ENSHGLG00000016628	-	95	64.887	Heterocephalus_glaber_female
ENSOMEG00000020941	prpf4	99	74.526	ENSHGLG00000015191	PRPF4	96	74.526	Heterocephalus_glaber_female
ENSOMEG00000020941	prpf4	99	59.960	ENSHGLG00000003838	-	96	59.960	Heterocephalus_glaber_female
ENSOMEG00000020941	prpf4	99	59.960	ENSHGLG00100005571	-	96	59.960	Heterocephalus_glaber_male
ENSOMEG00000020941	prpf4	100	77.547	ENSIPUG00000017956	PRPF4	100	76.575	Ictalurus_punctatus
ENSOMEG00000020941	prpf4	99	75.158	ENSSTOG00000027833	PRPF4	96	75.158	Ictidomys_tridecemlineatus
ENSOMEG00000020941	prpf4	99	74.737	ENSJJAG00000008838	Prpf4	96	74.737	Jaculus_jaculus
ENSOMEG00000020941	prpf4	100	89.441	ENSKMAG00000013236	prpf4	100	89.020	Kryptolebias_marmoratus
ENSOMEG00000020941	prpf4	100	89.397	ENSLBEG00000020611	prpf4	100	88.976	Labrus_bergylta
ENSOMEG00000020941	prpf4	100	71.222	ENSLACG00000016317	PRPF4	97	71.222	Latimeria_chalumnae
ENSOMEG00000020941	prpf4	100	79.626	ENSLOCG00000000581	prpf4	100	78.937	Lepisosteus_oculatus
ENSOMEG00000020941	prpf4	99	74.737	ENSLAFG00000018225	PRPF4	96	74.737	Loxodonta_africana
ENSOMEG00000020941	prpf4	99	74.526	ENSMFAG00000039397	PRPF4	96	74.526	Macaca_fascicularis
ENSOMEG00000020941	prpf4	99	74.737	ENSMMUG00000005844	PRPF4	96	74.737	Macaca_mulatta
ENSOMEG00000020941	prpf4	99	64.940	ENSMNEG00000033737	PRPF4	96	65.139	Macaca_nemestrina
ENSOMEG00000020941	prpf4	99	74.737	ENSMLEG00000040284	PRPF4	96	74.737	Mandrillus_leucophaeus
ENSOMEG00000020941	prpf4	100	89.234	ENSMAMG00000020141	prpf4	100	88.824	Mastacembelus_armatus
ENSOMEG00000020941	prpf4	100	91.097	ENSMZEG00005023205	prpf4	100	90.392	Maylandia_zebra
ENSOMEG00000020941	prpf4	99	74.686	ENSMGAG00000001796	PRPF4	94	74.686	Meleagris_gallopavo
ENSOMEG00000020941	prpf4	99	74.526	ENSMAUG00000018022	Prpf4	96	74.526	Mesocricetus_auratus
ENSOMEG00000020941	prpf4	99	74.167	ENSMICG00000015022	PRPF4	97	74.167	Microcebus_murinus
ENSOMEG00000020941	prpf4	99	74.947	ENSMOCG00000018273	Prpf4	96	74.947	Microtus_ochrogaster
ENSOMEG00000020941	prpf4	100	88.727	ENSMMOG00000021177	prpf4	100	88.340	Mola_mola
ENSOMEG00000020941	prpf4	99	74.583	ENSMODG00000004444	-	97	74.895	Monodelphis_domestica
ENSOMEG00000020941	prpf4	99	73.542	ENSMODG00000025096	-	94	73.849	Monodelphis_domestica
ENSOMEG00000020941	prpf4	100	89.441	ENSMALG00000013624	prpf4	100	88.824	Monopterus_albus
ENSOMEG00000020941	prpf4	99	74.526	MGP_CAROLIEiJ_G0026078	Prpf4	96	74.526	Mus_caroli
ENSOMEG00000020941	prpf4	99	74.526	ENSMUSG00000066148	Prpf4	96	74.526	Mus_musculus
ENSOMEG00000020941	prpf4	99	74.737	MGP_PahariEiJ_G0028413	Prpf4	96	74.737	Mus_pahari
ENSOMEG00000020941	prpf4	99	74.526	MGP_SPRETEiJ_G0027042	Prpf4	96	74.526	Mus_spretus
ENSOMEG00000020941	prpf4	99	74.737	ENSMPUG00000007883	PRPF4	96	74.737	Mustela_putorius_furo
ENSOMEG00000020941	prpf4	98	74.841	ENSMLUG00000015309	-	93	74.841	Myotis_lucifugus
ENSOMEG00000020941	prpf4	98	73.573	ENSMLUG00000008626	-	93	73.573	Myotis_lucifugus
ENSOMEG00000020941	prpf4	99	69.263	ENSNGAG00000000468	Prpf4	96	69.323	Nannospalax_galili
ENSOMEG00000020941	prpf4	100	91.304	ENSNBRG00000007972	prpf4	100	90.588	Neolamprologus_brichardi
ENSOMEG00000020941	prpf4	99	74.737	ENSNLEG00000016647	PRPF4	96	74.737	Nomascus_leucogenys
ENSOMEG00000020941	prpf4	99	73.750	ENSMEUG00000013256	PRPF4	98	74.059	Notamacropus_eugenii
ENSOMEG00000020941	prpf4	99	75.158	ENSOPRG00000005302	PRPF4	96	75.158	Ochotona_princeps
ENSOMEG00000020941	prpf4	99	74.737	ENSODEG00000018147	PRPF4	96	74.737	Octodon_degus
ENSOMEG00000020941	prpf4	100	90.890	ENSONIG00000012671	prpf4	100	90.000	Oreochromis_niloticus
ENSOMEG00000020941	prpf4	99	74.947	ENSOCUG00000005046	PRPF4	96	74.947	Oryctolagus_cuniculus
ENSOMEG00000020941	prpf4	100	96.653	ENSORLG00000019641	prpf4	99	96.653	Oryzias_latipes
ENSOMEG00000020941	prpf4	100	96.653	ENSORLG00020019438	prpf4	99	96.653	Oryzias_latipes_hni
ENSOMEG00000020941	prpf4	99	70.737	ENSOGAG00000007802	PRPF4	94	70.737	Otolemur_garnettii
ENSOMEG00000020941	prpf4	99	74.737	ENSOARG00000006319	PRPF4	93	74.737	Ovis_aries
ENSOMEG00000020941	prpf4	99	74.737	ENSPPAG00000041797	PRPF4	96	74.737	Pan_paniscus
ENSOMEG00000020941	prpf4	99	74.737	ENSPPRG00000014360	PRPF4	96	74.737	Panthera_pardus
ENSOMEG00000020941	prpf4	99	74.737	ENSPTIG00000009574	PRPF4	96	74.737	Panthera_tigris_altaica
ENSOMEG00000020941	prpf4	99	74.737	ENSPTRG00000021274	PRPF4	96	74.737	Pan_troglodytes
ENSOMEG00000020941	prpf4	99	74.947	ENSPANG00000025776	PRPF4	92	74.947	Papio_anubis
ENSOMEG00000020941	prpf4	100	80.625	ENSPKIG00000017259	prpf4	100	79.882	Paramormyrops_kingsleyae
ENSOMEG00000020941	prpf4	100	74.636	ENSPSIG00000010713	PRPF4	89	74.636	Pelodiscus_sinensis
ENSOMEG00000020941	prpf4	100	63.405	ENSPMGG00000000997	prpf4	98	64.684	Periophthalmus_magnuspinnatus
ENSOMEG00000020941	prpf4	99	74.526	ENSPEMG00000024115	Prpf4	96	74.526	Peromyscus_maniculatus_bairdii
ENSOMEG00000020941	prpf4	99	73.958	ENSPCIG00000003821	PRPF4	98	74.268	Phascolarctos_cinereus
ENSOMEG00000020941	prpf4	100	81.725	ENSPFOG00000013524	prpf4	99	85.410	Poecilia_formosa
ENSOMEG00000020941	prpf4	86	83.385	ENSPLAG00000011620	prpf4	97	83.282	Poecilia_latipinna
ENSOMEG00000020941	prpf4	98	85.841	ENSPMEG00000006813	prpf4	100	85.841	Poecilia_mexicana
ENSOMEG00000020941	prpf4	99	74.947	ENSPCAG00000002561	PRPF4	98	74.947	Procavia_capensis
ENSOMEG00000020941	prpf4	99	74.947	ENSPCOG00000011975	PRPF4	96	74.947	Propithecus_coquereli
ENSOMEG00000020941	prpf4	99	71.579	ENSPVAG00000004708	PRPF4	96	71.579	Pteropus_vampyrus
ENSOMEG00000020941	prpf4	100	91.097	ENSPNYG00000008013	prpf4	100	90.392	Pundamilia_nyererei
ENSOMEG00000020941	prpf4	100	79.418	ENSPNAG00000000697	prpf4	100	78.937	Pygocentrus_nattereri
ENSOMEG00000020941	prpf4	99	74.526	ENSRNOG00000014777	Prpf4	96	74.526	Rattus_norvegicus
ENSOMEG00000020941	prpf4	99	74.737	ENSRBIG00000040221	PRPF4	96	74.737	Rhinopithecus_bieti
ENSOMEG00000020941	prpf4	99	74.737	ENSRROG00000040240	PRPF4	96	74.737	Rhinopithecus_roxellana
ENSOMEG00000020941	prpf4	99	73.958	ENSSHAG00000017658	PRPF4	97	74.268	Sarcophilus_harrisii
ENSOMEG00000020941	prpf4	100	80.665	ENSSFOG00015008963	prpf4	100	79.724	Scleropages_formosus
ENSOMEG00000020941	prpf4	100	87.992	ENSSMAG00000008889	prpf4	100	87.647	Scophthalmus_maximus
ENSOMEG00000020941	prpf4	100	89.648	ENSSDUG00000022083	prpf4	94	89.648	Seriola_dumerili
ENSOMEG00000020941	prpf4	100	89.441	ENSSLDG00000008115	prpf4	94	89.441	Seriola_lalandi_dorsalis
ENSOMEG00000020941	prpf4	99	75.000	ENSSPUG00000015582	PRPF4	97	75.000	Sphenodon_punctatus
ENSOMEG00000020941	prpf4	100	83.333	ENSSPAG00000011286	prpf4	100	83.333	Stegastes_partitus
ENSOMEG00000020941	prpf4	99	74.737	ENSSSCG00000024648	PRPF4	96	74.737	Sus_scrofa
ENSOMEG00000020941	prpf4	97	76.180	ENSTGUG00000002623	PRPF4	100	76.407	Taeniopygia_guttata
ENSOMEG00000020941	prpf4	100	86.100	ENSTRUG00000008853	prpf4	100	85.462	Takifugu_rubripes
ENSOMEG00000020941	prpf4	100	86.221	ENSTNIG00000013250	prpf4	100	85.968	Tetraodon_nigroviridis
ENSOMEG00000020941	prpf4	99	67.158	ENSTBEG00000000821	PRPF4	96	67.331	Tupaia_belangeri
ENSOMEG00000020941	prpf4	89	78.188	ENSTTRG00000003246	PRPF4	85	78.188	Tursiops_truncatus
ENSOMEG00000020941	prpf4	64	71.987	ENSUAMG00000018288	PRPF4	88	71.987	Ursus_americanus
ENSOMEG00000020941	prpf4	99	74.105	ENSUMAG00000019375	PRPF4	96	74.105	Ursus_maritimus
ENSOMEG00000020941	prpf4	98	74.788	ENSVPAG00000005281	PRPF4	96	74.788	Vicugna_pacos
ENSOMEG00000020941	prpf4	99	73.904	ENSVVUG00000002476	PRPF4	99	74.059	Vulpes_vulpes
ENSOMEG00000020941	prpf4	75	64.286	ENSXCOG00000006101	prpf4	93	66.917	Xiphophorus_couchianus
ENSOMEG00000020941	prpf4	96	73.763	ENSXMAG00000002750	prpf4	100	74.803	Xiphophorus_maculatus