EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000020952 (Gene tree)
Gene ID: 112147386
Gene Symbol: srp54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 6222 bases
Position: chrNVQA01000001.1:2201593-2207814
Accession: 112147386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000034368	SRP54	PF00448.22	2.5e-77	1	1
ENSOMEP00000034368	SRP54_N	PF02881.19	4.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000028312	-	3369	-	ENSOMEP00000034368	504 (aa)	XP_024129506	UPI000CF810AE

Gene Model

Click here to download ENSOMEG00000020952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000020952's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000020952	srp54	100	95.635	ENSG00000100883	SRP54	100	97.674	Homo_sapiens
ENSOMEG00000020952	srp54	100	99.206	ENSAPOG00000011314	srp54	100	99.206	Acanthochromis_polyacanthus
ENSOMEG00000020952	srp54	100	95.635	ENSAMEG00000015544	SRP54	100	95.635	Ailuropoda_melanoleuca
ENSOMEG00000020952	srp54	89	98.664	ENSACIG00000022831	srp54	97	98.664	Amphilophus_citrinellus
ENSOMEG00000020952	srp54	100	99.206	ENSAOCG00000019401	srp54	100	99.206	Amphiprion_ocellaris
ENSOMEG00000020952	srp54	100	99.206	ENSAPEG00000001977	srp54	100	99.206	Amphiprion_percula
ENSOMEG00000020952	srp54	100	99.405	ENSATEG00000013877	srp54	100	99.405	Anabas_testudineus
ENSOMEG00000020952	srp54	94	94.937	ENSAPLG00000010125	SRP54	95	94.937	Anas_platyrhynchos
ENSOMEG00000020952	srp54	100	95.040	ENSACAG00000002103	-	100	95.040	Anolis_carolinensis
ENSOMEG00000020952	srp54	65	79.456	ENSACAG00000001124	-	100	79.456	Anolis_carolinensis
ENSOMEG00000020952	srp54	86	92.166	ENSACAG00000010631	-	100	92.166	Anolis_carolinensis
ENSOMEG00000020952	srp54	100	95.635	ENSANAG00000022133	SRP54	100	95.635	Aotus_nancymaae
ENSOMEG00000020952	srp54	100	99.603	ENSACLG00000015866	srp54	100	99.603	Astatotilapia_calliptera
ENSOMEG00000020952	srp54	100	98.214	ENSAMXG00000032669	SRP54	100	98.214	Astyanax_mexicanus
ENSOMEG00000020952	srp54	100	95.635	ENSBTAG00000019085	SRP54	100	95.635	Bos_taurus
ENSOMEG00000020952	srp54	98	72.490	WBGene00009012	F21D5.7	100	72.490	Caenorhabditis_elegans
ENSOMEG00000020952	srp54	100	95.635	ENSCJAG00000006581	SRP54	100	95.635	Callithrix_jacchus
ENSOMEG00000020952	srp54	100	95.635	ENSCAFG00000013331	SRP54	100	95.635	Canis_familiaris
ENSOMEG00000020952	srp54	100	95.635	ENSCAFG00020023427	SRP54	100	95.635	Canis_lupus_dingo
ENSOMEG00000020952	srp54	100	95.635	ENSCHIG00000026345	SRP54	100	95.635	Capra_hircus
ENSOMEG00000020952	srp54	94	84.000	ENSTSYG00000035333	-	93	84.000	Carlito_syrichta
ENSOMEG00000020952	srp54	100	95.437	ENSTSYG00000002680	-	100	95.437	Carlito_syrichta
ENSOMEG00000020952	srp54	94	61.429	ENSCAPG00000008780	SRP54	100	61.429	Cavia_aperea
ENSOMEG00000020952	srp54	100	95.238	ENSCPOG00000003691	SRP54	100	95.238	Cavia_porcellus
ENSOMEG00000020952	srp54	90	95.238	ENSCCAG00000024179	SRP54	100	95.465	Cebus_capucinus
ENSOMEG00000020952	srp54	100	95.635	ENSCATG00000034083	SRP54	100	95.635	Cercocebus_atys
ENSOMEG00000020952	srp54	100	95.635	ENSCLAG00000015076	SRP54	100	95.635	Chinchilla_lanigera
ENSOMEG00000020952	srp54	100	95.635	ENSCSAG00000015575	SRP54	100	95.635	Chlorocebus_sabaeus
ENSOMEG00000020952	srp54	95	84.615	ENSCHOG00000008986	SRP54	100	84.615	Choloepus_hoffmanni
ENSOMEG00000020952	srp54	100	95.635	ENSCPBG00000026195	SRP54	100	95.635	Chrysemys_picta_bellii
ENSOMEG00000020952	srp54	100	82.540	ENSCING00000007380	-	100	82.540	Ciona_intestinalis
ENSOMEG00000020952	srp54	100	95.635	ENSCANG00000028532	SRP54	100	95.635	Colobus_angolensis_palliatus
ENSOMEG00000020952	srp54	100	96.032	ENSCGRG00001009525	-	100	96.032	Cricetulus_griseus_chok1gshd
ENSOMEG00000020952	srp54	76	96.364	ENSCGRG00000009453	-	89	96.364	Cricetulus_griseus_crigri
ENSOMEG00000020952	srp54	100	98.413	ENSCSEG00000012392	srp54	100	98.413	Cynoglossus_semilaevis
ENSOMEG00000020952	srp54	100	98.810	ENSCVAG00000010395	srp54	100	98.810	Cyprinodon_variegatus
ENSOMEG00000020952	srp54	100	98.214	ENSDARG00000098367	srp54	100	98.214	Danio_rerio
ENSOMEG00000020952	srp54	100	95.635	ENSDNOG00000032525	SRP54	100	95.635	Dasypus_novemcinctus
ENSOMEG00000020952	srp54	89	80.752	ENSDORG00000005159	-	98	80.752	Dipodomys_ordii
ENSOMEG00000020952	srp54	96	79.381	FBgn0010747	Srp54k	98	78.916	Drosophila_melanogaster
ENSOMEG00000020952	srp54	100	94.841	ENSETEG00000016307	-	100	94.841	Echinops_telfairi
ENSOMEG00000020952	srp54	83	55.742	ENSETEG00000012102	-	99	55.742	Echinops_telfairi
ENSOMEG00000020952	srp54	100	88.690	ENSEBUG00000009437	-	100	88.690	Eptatretus_burgeri
ENSOMEG00000020952	srp54	100	95.635	ENSEASG00005002057	SRP54	100	95.635	Equus_asinus_asinus
ENSOMEG00000020952	srp54	99	95.382	ENSECAG00000018042	SRP54	98	95.382	Equus_caballus
ENSOMEG00000020952	srp54	100	79.960	ENSEEUG00000001511	SRP54	100	79.960	Erinaceus_europaeus
ENSOMEG00000020952	srp54	100	97.421	ENSELUG00000003395	srp54	100	97.421	Esox_lucius
ENSOMEG00000020952	srp54	100	95.833	ENSFCAG00000032033	SRP54	100	95.833	Felis_catus
ENSOMEG00000020952	srp54	100	95.238	ENSFALG00000005995	SRP54	100	95.238	Ficedula_albicollis
ENSOMEG00000020952	srp54	100	95.635	ENSFDAG00000016767	SRP54	100	95.635	Fukomys_damarensis
ENSOMEG00000020952	srp54	100	99.206	ENSFHEG00000004263	srp54	100	99.206	Fundulus_heteroclitus
ENSOMEG00000020952	srp54	95	92.050	ENSGMOG00000011391	srp54	100	92.050	Gadus_morhua
ENSOMEG00000020952	srp54	100	95.238	ENSGALG00000023135	SRP54	100	95.238	Gallus_gallus
ENSOMEG00000020952	srp54	100	99.008	ENSGAFG00000011586	srp54	100	99.008	Gambusia_affinis
ENSOMEG00000020952	srp54	100	98.810	ENSGACG00000004181	srp54	100	98.810	Gasterosteus_aculeatus
ENSOMEG00000020952	srp54	100	95.635	ENSGAGG00000014766	SRP54	100	95.635	Gopherus_agassizii
ENSOMEG00000020952	srp54	100	95.635	ENSGGOG00000002926	SRP54	100	95.635	Gorilla_gorilla
ENSOMEG00000020952	srp54	100	99.603	ENSHBUG00000005678	srp54	100	99.603	Haplochromis_burtoni
ENSOMEG00000020952	srp54	100	95.635	ENSHGLG00000002850	SRP54	100	95.635	Heterocephalus_glaber_female
ENSOMEG00000020952	srp54	100	66.733	ENSHGLG00100007281	-	100	66.733	Heterocephalus_glaber_male
ENSOMEG00000020952	srp54	100	95.635	ENSHGLG00100005263	SRP54	100	95.635	Heterocephalus_glaber_male
ENSOMEG00000020952	srp54	100	97.817	ENSHCOG00000021127	srp54	100	97.817	Hippocampus_comes
ENSOMEG00000020952	srp54	100	97.421	ENSIPUG00000001420	srp54	100	97.421	Ictalurus_punctatus
ENSOMEG00000020952	srp54	100	95.635	ENSSTOG00000016023	SRP54	100	95.635	Ictidomys_tridecemlineatus
ENSOMEG00000020952	srp54	100	91.270	ENSJJAG00000013417	-	100	91.270	Jaculus_jaculus
ENSOMEG00000020952	srp54	87	74.545	ENSJJAG00000016404	-	100	74.545	Jaculus_jaculus
ENSOMEG00000020952	srp54	100	98.413	ENSKMAG00000007707	srp54	100	98.413	Kryptolebias_marmoratus
ENSOMEG00000020952	srp54	100	99.405	ENSLBEG00000021122	srp54	100	99.405	Labrus_bergylta
ENSOMEG00000020952	srp54	100	99.405	ENSLBEG00000018690	srp54	100	99.405	Labrus_bergylta
ENSOMEG00000020952	srp54	100	95.635	ENSLACG00000017890	SRP54	100	95.635	Latimeria_chalumnae
ENSOMEG00000020952	srp54	100	97.817	ENSLOCG00000009440	srp54	100	97.817	Lepisosteus_oculatus
ENSOMEG00000020952	srp54	100	95.635	ENSLAFG00000012007	SRP54	100	95.635	Loxodonta_africana
ENSOMEG00000020952	srp54	100	95.635	ENSMFAG00000044371	SRP54	100	95.635	Macaca_fascicularis
ENSOMEG00000020952	srp54	100	95.635	ENSMMUG00000015073	FAM177A1	100	95.635	Macaca_mulatta
ENSOMEG00000020952	srp54	100	95.635	ENSMNEG00000006947	SRP54	100	95.635	Macaca_nemestrina
ENSOMEG00000020952	srp54	100	95.635	ENSMLEG00000042251	SRP54	100	95.635	Mandrillus_leucophaeus
ENSOMEG00000020952	srp54	100	99.603	ENSMAMG00000004803	srp54	100	99.603	Mastacembelus_armatus
ENSOMEG00000020952	srp54	100	99.603	ENSMZEG00005027528	srp54	100	99.603	Maylandia_zebra
ENSOMEG00000020952	srp54	100	90.909	ENSMGAG00000012481	SRP54	100	90.909	Meleagris_gallopavo
ENSOMEG00000020952	srp54	100	95.833	ENSMAUG00000014447	-	100	95.833	Mesocricetus_auratus
ENSOMEG00000020952	srp54	100	95.635	ENSMICG00000010270	SRP54	100	95.635	Microcebus_murinus
ENSOMEG00000020952	srp54	87	95.682	ENSMOCG00000000948	-	100	95.682	Microtus_ochrogaster
ENSOMEG00000020952	srp54	90	96.476	ENSMMOG00000020303	srp54	99	96.476	Mola_mola
ENSOMEG00000020952	srp54	100	95.635	ENSMODG00000023150	-	100	95.635	Monodelphis_domestica
ENSOMEG00000020952	srp54	100	95.635	ENSMODG00000012925	-	100	95.635	Monodelphis_domestica
ENSOMEG00000020952	srp54	88	99.097	ENSMALG00000009163	srp54	98	99.097	Monopterus_albus
ENSOMEG00000020952	srp54	100	95.833	MGP_CAROLIEiJ_G0017754	-	100	95.833	Mus_caroli
ENSOMEG00000020952	srp54	100	95.833	ENSMUSG00000073079	Srp54a	100	96.364	Mus_musculus
ENSOMEG00000020952	srp54	100	95.833	ENSMUSG00000112449	Srp54b	100	95.833	Mus_musculus
ENSOMEG00000020952	srp54	100	95.040	ENSMUSG00000079108	Srp54c	100	95.040	Mus_musculus
ENSOMEG00000020952	srp54	100	95.833	MGP_PahariEiJ_G0029510	-	100	95.833	Mus_pahari
ENSOMEG00000020952	srp54	100	95.635	ENSMPUG00000016302	SRP54	100	95.635	Mustela_putorius_furo
ENSOMEG00000020952	srp54	100	95.040	ENSMLUG00000008958	SRP54	100	95.040	Myotis_lucifugus
ENSOMEG00000020952	srp54	100	86.508	ENSNGAG00000019806	-	100	86.508	Nannospalax_galili
ENSOMEG00000020952	srp54	87	99.773	ENSNBRG00000006000	srp54	100	99.773	Neolamprologus_brichardi
ENSOMEG00000020952	srp54	100	95.635	ENSNLEG00000003496	SRP54	100	95.635	Nomascus_leucogenys
ENSOMEG00000020952	srp54	67	98.214	ENSMEUG00000000138	-	76	98.214	Notamacropus_eugenii
ENSOMEG00000020952	srp54	58	96.721	ENSOPRG00000014502	-	60	96.721	Ochotona_princeps
ENSOMEG00000020952	srp54	100	95.635	ENSODEG00000004865	SRP54	100	95.635	Octodon_degus
ENSOMEG00000020952	srp54	100	99.603	ENSONIG00000011768	srp54	100	99.603	Oreochromis_niloticus
ENSOMEG00000020952	srp54	100	95.635	ENSOANG00000014051	SRP54	100	95.635	Ornithorhynchus_anatinus
ENSOMEG00000020952	srp54	100	95.040	ENSOCUG00000007838	SRP54	100	95.040	Oryctolagus_cuniculus
ENSOMEG00000020952	srp54	100	99.802	ENSORLG00000010027	srp54	100	99.802	Oryzias_latipes
ENSOMEG00000020952	srp54	100	99.802	ENSORLG00020001878	srp54	100	99.802	Oryzias_latipes_hni
ENSOMEG00000020952	srp54	100	99.802	ENSORLG00015021866	srp54	100	99.802	Oryzias_latipes_hsok
ENSOMEG00000020952	srp54	100	95.635	ENSOGAG00000012188	SRP54	100	95.635	Otolemur_garnettii
ENSOMEG00000020952	srp54	100	95.635	ENSOARG00000007160	SRP54	100	95.635	Ovis_aries
ENSOMEG00000020952	srp54	100	95.635	ENSPPAG00000017434	SRP54	100	95.635	Pan_paniscus
ENSOMEG00000020952	srp54	100	95.040	ENSPPRG00000014047	SRP54	100	95.040	Panthera_pardus
ENSOMEG00000020952	srp54	100	95.833	ENSPTIG00000000744	SRP54	96	95.833	Panthera_tigris_altaica
ENSOMEG00000020952	srp54	100	95.635	ENSPTRG00000006259	FAM177A1	100	95.635	Pan_troglodytes
ENSOMEG00000020952	srp54	100	95.635	ENSPANG00000023853	SRP54	100	95.635	Papio_anubis
ENSOMEG00000020952	srp54	100	97.619	ENSPKIG00000001953	srp54	100	97.619	Paramormyrops_kingsleyae
ENSOMEG00000020952	srp54	100	95.437	ENSPSIG00000006476	SRP54	100	95.437	Pelodiscus_sinensis
ENSOMEG00000020952	srp54	91	95.652	ENSPMGG00000004127	srp54	99	95.652	Periophthalmus_magnuspinnatus
ENSOMEG00000020952	srp54	100	83.730	ENSPEMG00000019634	-	100	83.730	Peromyscus_maniculatus_bairdii
ENSOMEG00000020952	srp54	100	90.079	ENSPMAG00000006078	-	100	90.079	Petromyzon_marinus
ENSOMEG00000020952	srp54	100	95.635	ENSPCIG00000016175	SRP54	100	95.635	Phascolarctos_cinereus
ENSOMEG00000020952	srp54	100	99.008	ENSPFOG00000008870	srp54	100	99.008	Poecilia_formosa
ENSOMEG00000020952	srp54	100	99.008	ENSPLAG00000009889	srp54	100	99.008	Poecilia_latipinna
ENSOMEG00000020952	srp54	100	99.008	ENSPMEG00000008601	srp54	100	99.008	Poecilia_mexicana
ENSOMEG00000020952	srp54	100	99.008	ENSPREG00000004505	srp54	100	99.008	Poecilia_reticulata
ENSOMEG00000020952	srp54	100	90.873	ENSPPYG00000005739	SRP54	100	90.873	Pongo_abelii
ENSOMEG00000020952	srp54	100	92.063	ENSPCAG00000006268	SRP54	100	92.063	Procavia_capensis
ENSOMEG00000020952	srp54	100	93.663	ENSPCOG00000022473	SRP54	100	93.663	Propithecus_coquereli
ENSOMEG00000020952	srp54	63	96.809	ENSPVAG00000010056	SRP54	82	96.809	Pteropus_vampyrus
ENSOMEG00000020952	srp54	100	99.603	ENSPNYG00000009717	srp54	100	99.603	Pundamilia_nyererei
ENSOMEG00000020952	srp54	100	98.016	ENSPNAG00000008544	srp54	100	98.016	Pygocentrus_nattereri
ENSOMEG00000020952	srp54	100	95.635	ENSRNOG00000032776	Srp54a	100	95.635	Rattus_norvegicus
ENSOMEG00000020952	srp54	100	95.635	ENSRROG00000041292	SRP54	100	95.635	Rhinopithecus_roxellana
ENSOMEG00000020952	srp54	86	51.474	YPR088C	SRP54	95	47.126	Saccharomyces_cerevisiae
ENSOMEG00000020952	srp54	94	95.359	ENSSBOG00000035145	SRP54	100	95.359	Saimiri_boliviensis_boliviensis
ENSOMEG00000020952	srp54	68	94.752	ENSSHAG00000000671	SRP54	100	94.752	Sarcophilus_harrisii
ENSOMEG00000020952	srp54	100	98.016	ENSSFOG00015013920	srp54	100	98.016	Scleropages_formosus
ENSOMEG00000020952	srp54	100	93.446	ENSSMAG00000002441	srp54	100	93.446	Scophthalmus_maximus
ENSOMEG00000020952	srp54	100	99.405	ENSSDUG00000018586	srp54	100	99.405	Seriola_dumerili
ENSOMEG00000020952	srp54	100	99.206	ENSSLDG00000010476	srp54	100	99.206	Seriola_lalandi_dorsalis
ENSOMEG00000020952	srp54	100	95.635	ENSSARG00000002744	SRP54	100	95.635	Sorex_araneus
ENSOMEG00000020952	srp54	100	95.635	ENSSPUG00000013101	SRP54	100	95.635	Sphenodon_punctatus
ENSOMEG00000020952	srp54	100	99.206	ENSSPAG00000002354	srp54	100	99.206	Stegastes_partitus
ENSOMEG00000020952	srp54	100	95.635	ENSSSCG00000001955	SRP54	100	95.635	Sus_scrofa
ENSOMEG00000020952	srp54	94	94.937	ENSTGUG00000011945	-	95	94.937	Taeniopygia_guttata
ENSOMEG00000020952	srp54	100	99.206	ENSTRUG00000007057	srp54	100	99.206	Takifugu_rubripes
ENSOMEG00000020952	srp54	100	98.611	ENSTNIG00000002589	srp54	100	98.611	Tetraodon_nigroviridis
ENSOMEG00000020952	srp54	89	86.801	ENSTBEG00000011409	SRP54	100	86.801	Tupaia_belangeri
ENSOMEG00000020952	srp54	100	86.508	ENSTTRG00000000928	SRP54	100	86.508	Tursiops_truncatus
ENSOMEG00000020952	srp54	52	96.183	ENSUAMG00000012385	SRP54	100	96.183	Ursus_americanus
ENSOMEG00000020952	srp54	100	95.635	ENSUMAG00000011234	SRP54	100	95.635	Ursus_maritimus
ENSOMEG00000020952	srp54	94	95.148	ENSVPAG00000005668	SRP54	100	95.148	Vicugna_pacos
ENSOMEG00000020952	srp54	100	95.635	ENSVVUG00000019962	SRP54	100	95.635	Vulpes_vulpes
ENSOMEG00000020952	srp54	100	80.868	ENSXETG00000012290	srp54	100	80.868	Xenopus_tropicalis
ENSOMEG00000020952	srp54	88	98.871	ENSXCOG00000004658	srp54	96	98.871	Xiphophorus_couchianus
ENSOMEG00000020952	srp54	100	99.008	ENSXMAG00000018315	srp54	100	99.008	Xiphophorus_maculatus