EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000021030 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 2139 bases
Position: chrNVQA01000023.1:7532864-7535002
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000034413	RRM_1	PF00076.22	3.8e-46	1	3
ENSOMEP00000034413	RRM_1	PF00076.22	3.8e-46	2	3
ENSOMEP00000034413	RRM_1	PF00076.22	3.8e-46	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000028404	-	2106	-	ENSOMEP00000034413	442 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000021030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000021030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000021030	-	99	71.822	ENSOMEG00000002000	-	99	71.822
ENSOMEG00000021030	-	100	90.969	ENSOMEG00000012368	-	95	90.969
ENSOMEG00000021030	-	58	40.789	ENSOMEG00000005936	hnrnpaba	73	40.244
ENSOMEG00000021030	-	73	30.201	ENSOMEG00000023959	elavl3	87	30.201
ENSOMEG00000021030	-	68	36.449	ENSOMEG00000023772	hnrnpabb	86	35.514
ENSOMEG00000021030	-	100	91.648	ENSOMEG00000006903	-	94	91.648
ENSOMEG00000021030	-	74	90.964	ENSOMEG00000009566	-	86	90.964
ENSOMEG00000021030	-	77	40.909	ENSOMEG00000003120	dazap1	61	40.909
ENSOMEG00000021030	-	77	60.000	ENSOMEG00000002091	-	98	56.287
ENSOMEG00000021030	-	50	45.205	ENSOMEG00000021469	cirbpa	71	44.737
ENSOMEG00000021030	-	59	48.276	ENSOMEG00000004838	hnrnpa3	95	48.851
ENSOMEG00000021030	-	72	36.667	ENSOMEG00000000146	msi2a	58	35.870
ENSOMEG00000021030	-	77	30.709	ENSOMEG00000005178	ELAVL2	78	30.709
ENSOMEG00000021030	-	77	31.496	ENSOMEG00000009988	elavl4	69	31.496
ENSOMEG00000021030	-	100	84.977	ENSOMEG00000006327	-	97	84.977
ENSOMEG00000021030	-	71	36.905	ENSOMEG00000017536	MSI1	66	36.905
ENSOMEG00000021030	-	82	66.071	ENSOMEG00000011670	-	96	66.071
ENSOMEG00000021030	-	100	89.427	ENSOMEG00000023475	-	95	89.427
ENSOMEG00000021030	-	61	44.000	ENSOMEG00000018558	hnrnpd	80	44.000
ENSOMEG00000021030	-	90	67.647	ENSOMEG00000013637	-	100	67.647
ENSOMEG00000021030	-	85	72.034	ENSOMEG00000002084	-	71	72.034
ENSOMEG00000021030	-	66	51.136	ENSOMEG00000015959	-	80	45.238
ENSOMEG00000021030	-	100	90.308	ENSOMEG00000002509	-	99	90.308
ENSOMEG00000021030	-	70	37.989	ENSOMEG00000002272	-	55	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000021030	-	72	64.417	ENSAOCG00000015951	-	96	64.417	Amphiprion_ocellaris
ENSOMEG00000021030	-	70	56.667	ENSAOCG00000015914	-	67	55.851	Amphiprion_ocellaris
ENSOMEG00000021030	-	68	56.667	ENSAPEG00000002224	-	78	55.851	Amphiprion_percula
ENSOMEG00000021030	-	72	64.417	ENSAPEG00000002274	-	96	64.417	Amphiprion_percula
ENSOMEG00000021030	-	68	57.222	ENSACLG00000008978	-	85	56.383	Astatotilapia_calliptera
ENSOMEG00000021030	-	81	51.163	ENSCVAG00000008324	-	99	51.802	Cyprinodon_variegatus
ENSOMEG00000021030	-	65	43.931	FBgn0004237	Hrb87F	76	41.441	Drosophila_melanogaster
ENSOMEG00000021030	-	62	43.860	FBgn0001215	Hrb98DE	89	38.095	Drosophila_melanogaster
ENSOMEG00000021030	-	76	38.667	ENSEBUG00000010003	-	87	38.667	Eptatretus_burgeri
ENSOMEG00000021030	-	68	57.831	ENSELUG00000014407	-	98	57.831	Esox_lucius
ENSOMEG00000021030	-	68	57.222	ENSHBUG00000023867	-	85	56.383	Haplochromis_burtoni
ENSOMEG00000021030	-	67	57.471	ENSHCOG00000007180	-	100	50.917	Hippocampus_comes
ENSOMEG00000021030	-	72	53.571	ENSLBEG00000006362	-	79	53.571	Labrus_bergylta
ENSOMEG00000021030	-	70	54.839	ENSLOCG00000012121	-	66	54.839	Lepisosteus_oculatus
ENSOMEG00000021030	-	68	54.444	ENSMAMG00000017728	-	70	53.723	Mastacembelus_armatus
ENSOMEG00000021030	-	68	57.222	ENSMZEG00005001063	-	84	56.383	Maylandia_zebra
ENSOMEG00000021030	-	72	60.000	ENSMMOG00000004242	-	98	60.000	Mola_mola
ENSOMEG00000021030	-	79	41.618	ENSMEUG00000003051	-	84	41.573	Notamacropus_eugenii
ENSOMEG00000021030	-	76	58.209	ENSORLG00000030284	-	73	58.209	Oryzias_latipes
ENSOMEG00000021030	-	85	66.286	ENSORLG00000023176	-	96	66.667	Oryzias_latipes
ENSOMEG00000021030	-	85	66.667	ENSORLG00000023542	-	96	67.052	Oryzias_latipes
ENSOMEG00000021030	-	82	55.114	ENSORLG00020007171	-	98	55.114	Oryzias_latipes_hni
ENSOMEG00000021030	-	89	62.176	ENSORLG00020006029	-	95	55.285	Oryzias_latipes_hni
ENSOMEG00000021030	-	73	66.026	ENSORLG00020007084	-	75	66.026	Oryzias_latipes_hni
ENSOMEG00000021030	-	73	57.222	ENSPREG00000010603	-	72	51.948	Poecilia_reticulata
ENSOMEG00000021030	-	68	57.222	ENSPNYG00000020763	-	85	56.383	Pundamilia_nyererei
ENSOMEG00000021030	-	75	55.901	ENSPNAG00000018051	-	79	55.901	Pygocentrus_nattereri
ENSOMEG00000021030	-	79	53.757	ENSSHAG00000015609	-	99	46.930	Sarcophilus_harrisii
ENSOMEG00000021030	-	68	53.571	ENSSDUG00000002394	-	87	53.571	Seriola_dumerili
ENSOMEG00000021030	-	70	66.000	ENSSLDG00000024685	-	85	66.000	Seriola_lalandi_dorsalis