EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000021202 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 609 bases
Position: chrNVQA01005871.1:412-1020
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000034523	RRM_5	PF13893.6	6.3e-11	1	2
ENSOMEP00000034523	RRM_5	PF13893.6	6.3e-11	2	2
ENSOMEP00000034523	RRM_1	PF00076.22	6.6e-30	1	2
ENSOMEP00000034523	RRM_1	PF00076.22	6.6e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000028617	-	498	-	ENSOMEP00000034523	166 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000021202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000021202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000021202	-	98	33.889	ENSOMEG00000006508	-	92	37.063

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000021202	-	92	75.817	ENSAMXG00000040224	rbm4.3	61	77.551	Astyanax_mexicanus
ENSOMEG00000021202	-	87	87.681	ENSKMAG00000017456	rbm4.3	100	87.681	Kryptolebias_marmoratus
ENSOMEG00000021202	-	97	67.485	ENSLBEG00000001025	rbm4.3	67	69.388	Labrus_bergylta
ENSOMEG00000021202	-	95	80.892	ENSMMOG00000012143	rbm4.3	86	83.673	Mola_mola
ENSOMEG00000021202	-	99	75.758	ENSPKIG00000007001	rbm4.3	63	78.231	Paramormyrops_kingsleyae
ENSOMEG00000021202	-	89	73.529	ENSPMGG00000005450	-	75	73.529	Periophthalmus_magnuspinnatus
ENSOMEG00000021202	-	92	86.928	ENSPLAG00000006107	rbm4.3	85	87.755	Poecilia_latipinna
ENSOMEG00000021202	-	90	88.000	ENSXCOG00000006010	rbm4.3	91	89.116	Xiphophorus_couchianus