EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000021278 (Gene tree)
Gene ID: 112157669
Gene Symbol: rtcb
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 3302 bases
Position: chrNVQA01000003.1:19441488-19444789
Accession: 112157669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000034569	RtcB	PF01139.17	4.7e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000028705	-	1706	-	ENSOMEP00000034569	505 (aa)	XP_024146311	UPI000CF7F50E

Gene Model

Click here to download ENSOMEG00000021278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000021278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000021278	rtcb	100	93.663	ENSG00000100220	RTCB	100	93.663	Homo_sapiens
ENSOMEG00000021278	rtcb	100	96.040	ENSAPOG00000006040	rtcb	100	96.040	Acanthochromis_polyacanthus
ENSOMEG00000021278	rtcb	100	93.663	ENSAMEG00000016152	RTCB	100	93.663	Ailuropoda_melanoleuca
ENSOMEG00000021278	rtcb	100	91.089	ENSACIG00000009083	rtcb	100	91.089	Amphilophus_citrinellus
ENSOMEG00000021278	rtcb	100	96.238	ENSAOCG00000005662	rtcb	100	97.826	Amphiprion_ocellaris
ENSOMEG00000021278	rtcb	96	91.992	ENSAPEG00000024653	rtcb	100	91.992	Amphiprion_percula
ENSOMEG00000021278	rtcb	100	96.238	ENSAPEG00000024701	rtcb	100	96.238	Amphiprion_percula
ENSOMEG00000021278	rtcb	100	96.238	ENSATEG00000000618	rtcb	100	96.238	Anabas_testudineus
ENSOMEG00000021278	rtcb	100	90.751	ENSACAG00000014817	RTCB	100	90.751	Anolis_carolinensis
ENSOMEG00000021278	rtcb	72	94.444	ENSANAG00000023724	-	84	94.444	Aotus_nancymaae
ENSOMEG00000021278	rtcb	100	79.208	ENSANAG00000018191	-	91	79.208	Aotus_nancymaae
ENSOMEG00000021278	rtcb	100	95.446	ENSACLG00000008367	rtcb	100	96.522	Astatotilapia_calliptera
ENSOMEG00000021278	rtcb	100	95.050	ENSAMXG00000042320	rtcb	100	95.050	Astyanax_mexicanus
ENSOMEG00000021278	rtcb	100	93.861	ENSBTAG00000011070	RTCB	100	93.861	Bos_taurus
ENSOMEG00000021278	rtcb	100	73.861	WBGene00008877	rtcb-1	100	73.861	Caenorhabditis_elegans
ENSOMEG00000021278	rtcb	100	93.465	ENSCJAG00000006128	RTCB	100	93.465	Callithrix_jacchus
ENSOMEG00000021278	rtcb	100	93.663	ENSCAFG00000001785	RTCB	100	93.663	Canis_familiaris
ENSOMEG00000021278	rtcb	100	89.505	ENSCAFG00000010789	-	100	89.505	Canis_familiaris
ENSOMEG00000021278	rtcb	87	89.545	ENSCAFG00020018953	-	99	89.545	Canis_lupus_dingo
ENSOMEG00000021278	rtcb	100	93.663	ENSCAFG00020004890	-	100	93.663	Canis_lupus_dingo
ENSOMEG00000021278	rtcb	100	93.663	ENSCHIG00000027009	-	100	93.663	Capra_hircus
ENSOMEG00000021278	rtcb	100	93.267	ENSTSYG00000012320	RTCB	100	93.267	Carlito_syrichta
ENSOMEG00000021278	rtcb	94	93.711	ENSCAPG00000011647	RTCB	96	93.711	Cavia_aperea
ENSOMEG00000021278	rtcb	100	93.465	ENSCCAG00000000618	RTCB	100	93.465	Cebus_capucinus
ENSOMEG00000021278	rtcb	100	93.663	ENSCATG00000033424	RTCB	100	93.663	Cercocebus_atys
ENSOMEG00000021278	rtcb	100	94.059	ENSCLAG00000007997	RTCB	100	94.059	Chinchilla_lanigera
ENSOMEG00000021278	rtcb	100	93.465	ENSCSAG00000008351	RTCB	100	93.465	Chlorocebus_sabaeus
ENSOMEG00000021278	rtcb	100	79.802	ENSCHOG00000009123	RTCB	100	79.802	Choloepus_hoffmanni
ENSOMEG00000021278	rtcb	100	93.267	ENSCPBG00000023184	RTCB	100	93.267	Chrysemys_picta_bellii
ENSOMEG00000021278	rtcb	100	82.178	ENSCING00000003830	-	100	82.178	Ciona_intestinalis
ENSOMEG00000021278	rtcb	100	82.376	ENSCSAVG00000008124	-	100	81.549	Ciona_savignyi
ENSOMEG00000021278	rtcb	100	89.901	ENSCANG00000001891	RTCB	100	89.901	Colobus_angolensis_palliatus
ENSOMEG00000021278	rtcb	100	93.267	ENSCGRG00001011173	Rtcb	100	93.267	Cricetulus_griseus_chok1gshd
ENSOMEG00000021278	rtcb	93	94.268	ENSCGRG00000009587	-	96	94.268	Cricetulus_griseus_crigri
ENSOMEG00000021278	rtcb	100	95.644	ENSCSEG00000003986	rtcb	100	95.644	Cynoglossus_semilaevis
ENSOMEG00000021278	rtcb	82	95.913	ENSCVAG00000000569	rtcb	95	95.913	Cyprinodon_variegatus
ENSOMEG00000021278	rtcb	100	95.644	ENSDARG00000101047	rtcb	100	95.644	Danio_rerio
ENSOMEG00000021278	rtcb	80	89.681	ENSDNOG00000012425	RTCB	99	89.681	Dasypus_novemcinctus
ENSOMEG00000021278	rtcb	100	93.069	ENSDORG00000010855	Rtcb	100	93.069	Dipodomys_ordii
ENSOMEG00000021278	rtcb	99	84.891	FBgn0032781	RtcB	99	84.891	Drosophila_melanogaster
ENSOMEG00000021278	rtcb	100	87.525	ENSETEG00000001988	RTCB	100	87.525	Echinops_telfairi
ENSOMEG00000021278	rtcb	100	86.337	ENSEBUG00000014235	rtcb	100	86.337	Eptatretus_burgeri
ENSOMEG00000021278	rtcb	100	93.465	ENSEASG00005019059	RTCB	100	93.465	Equus_asinus_asinus
ENSOMEG00000021278	rtcb	100	93.465	ENSECAG00000023998	RTCB	100	93.465	Equus_caballus
ENSOMEG00000021278	rtcb	89	85.011	ENSEEUG00000006251	RTCB	100	85.011	Erinaceus_europaeus
ENSOMEG00000021278	rtcb	100	82.798	ENSELUG00000009275	rtcb	100	82.798	Esox_lucius
ENSOMEG00000021278	rtcb	100	93.663	ENSFCAG00000026480	RTCB	100	93.663	Felis_catus
ENSOMEG00000021278	rtcb	100	93.861	ENSFALG00000013334	RTCB	100	93.861	Ficedula_albicollis
ENSOMEG00000021278	rtcb	100	93.465	ENSFDAG00000018150	RTCB	100	93.465	Fukomys_damarensis
ENSOMEG00000021278	rtcb	100	96.040	ENSFHEG00000009595	rtcb	100	96.040	Fundulus_heteroclitus
ENSOMEG00000021278	rtcb	100	92.871	ENSGMOG00000018882	rtcb	100	92.871	Gadus_morhua
ENSOMEG00000021278	rtcb	100	93.465	ENSGALG00000012611	RTCB	100	93.465	Gallus_gallus
ENSOMEG00000021278	rtcb	100	96.436	ENSGAFG00000004198	rtcb	100	96.436	Gambusia_affinis
ENSOMEG00000021278	rtcb	100	95.050	ENSGACG00000000586	rtcb	100	95.050	Gasterosteus_aculeatus
ENSOMEG00000021278	rtcb	93	92.979	ENSGAGG00000019133	RTCB	98	92.979	Gopherus_agassizii
ENSOMEG00000021278	rtcb	100	93.663	ENSGGOG00000011402	RTCB	100	93.663	Gorilla_gorilla
ENSOMEG00000021278	rtcb	100	95.446	ENSHBUG00000020571	rtcb	100	95.446	Haplochromis_burtoni
ENSOMEG00000021278	rtcb	93	67.804	ENSHGLG00000001066	-	99	67.804	Heterocephalus_glaber_female
ENSOMEG00000021278	rtcb	100	93.465	ENSHGLG00000004492	RTCB	100	93.465	Heterocephalus_glaber_female
ENSOMEG00000021278	rtcb	100	93.465	ENSHGLG00100008965	RTCB	100	93.465	Heterocephalus_glaber_male
ENSOMEG00000021278	rtcb	100	94.083	ENSHCOG00000006450	rtcb	100	94.083	Hippocampus_comes
ENSOMEG00000021278	rtcb	100	94.653	ENSIPUG00000015443	rtcb	100	94.653	Ictalurus_punctatus
ENSOMEG00000021278	rtcb	100	93.465	ENSSTOG00000003878	RTCB	100	93.465	Ictidomys_tridecemlineatus
ENSOMEG00000021278	rtcb	100	93.663	ENSJJAG00000010667	Rtcb	100	93.663	Jaculus_jaculus
ENSOMEG00000021278	rtcb	100	96.832	ENSKMAG00000013178	rtcb	100	96.832	Kryptolebias_marmoratus
ENSOMEG00000021278	rtcb	100	96.634	ENSLBEG00000010566	RTCB	100	96.634	Labrus_bergylta
ENSOMEG00000021278	rtcb	100	95.446	ENSLBEG00000000214	rtcb	100	95.446	Labrus_bergylta
ENSOMEG00000021278	rtcb	100	93.861	ENSLACG00000013033	RTCB	100	93.861	Latimeria_chalumnae
ENSOMEG00000021278	rtcb	100	95.248	ENSLOCG00000016515	rtcb	99	95.248	Lepisosteus_oculatus
ENSOMEG00000021278	rtcb	100	92.871	ENSLAFG00000002082	RTCB	100	92.871	Loxodonta_africana
ENSOMEG00000021278	rtcb	100	93.465	ENSMFAG00000034419	RTCB	100	93.465	Macaca_fascicularis
ENSOMEG00000021278	rtcb	100	93.465	ENSMMUG00000006720	RTCB	100	93.465	Macaca_mulatta
ENSOMEG00000021278	rtcb	100	93.465	ENSMNEG00000040669	RTCB	100	93.465	Macaca_nemestrina
ENSOMEG00000021278	rtcb	100	93.663	ENSMLEG00000040505	RTCB	100	93.663	Mandrillus_leucophaeus
ENSOMEG00000021278	rtcb	100	97.030	ENSMAMG00000020676	rtcb	100	97.030	Mastacembelus_armatus
ENSOMEG00000021278	rtcb	100	95.446	ENSMZEG00005018942	rtcb	100	95.446	Maylandia_zebra
ENSOMEG00000021278	rtcb	100	93.097	ENSMGAG00000012805	RTCB	100	93.097	Meleagris_gallopavo
ENSOMEG00000021278	rtcb	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSOMEG00000021278	rtcb	100	74.653	ENSMICG00000036677	-	100	74.653	Microcebus_murinus
ENSOMEG00000021278	rtcb	100	93.465	ENSMICG00000013303	-	100	93.465	Microcebus_murinus
ENSOMEG00000021278	rtcb	100	93.663	ENSMOCG00000002440	Rtcb	100	93.663	Microtus_ochrogaster
ENSOMEG00000021278	rtcb	100	96.436	ENSMMOG00000005987	rtcb	100	96.436	Mola_mola
ENSOMEG00000021278	rtcb	100	93.861	ENSMODG00000001414	RTCB	100	93.861	Monodelphis_domestica
ENSOMEG00000021278	rtcb	100	96.436	ENSMALG00000007603	rtcb	100	96.436	Monopterus_albus
ENSOMEG00000021278	rtcb	100	93.267	MGP_CAROLIEiJ_G0015689	Rtcb	100	93.267	Mus_caroli
ENSOMEG00000021278	rtcb	100	93.267	ENSMUSG00000001783	Rtcb	100	93.267	Mus_musculus
ENSOMEG00000021278	rtcb	100	93.267	MGP_PahariEiJ_G0031396	Rtcb	100	93.267	Mus_pahari
ENSOMEG00000021278	rtcb	100	93.267	MGP_SPRETEiJ_G0016507	Rtcb	100	93.267	Mus_spretus
ENSOMEG00000021278	rtcb	100	93.663	ENSMPUG00000012285	RTCB	100	93.663	Mustela_putorius_furo
ENSOMEG00000021278	rtcb	100	91.124	ENSMLUG00000007803	RTCB	100	91.124	Myotis_lucifugus
ENSOMEG00000021278	rtcb	72	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSOMEG00000021278	rtcb	100	95.446	ENSNBRG00000017202	rtcb	100	95.446	Neolamprologus_brichardi
ENSOMEG00000021278	rtcb	100	93.663	ENSNLEG00000004960	RTCB	100	93.663	Nomascus_leucogenys
ENSOMEG00000021278	rtcb	100	69.901	ENSMEUG00000007809	-	100	69.901	Notamacropus_eugenii
ENSOMEG00000021278	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSOMEG00000021278	rtcb	100	62.574	ENSODEG00000005042	-	100	62.574	Octodon_degus
ENSOMEG00000021278	rtcb	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSOMEG00000021278	rtcb	100	96.238	ENSONIG00000007474	rtcb	100	96.238	Oreochromis_niloticus
ENSOMEG00000021278	rtcb	100	93.465	ENSOANG00000005524	RTCB	100	93.465	Ornithorhynchus_anatinus
ENSOMEG00000021278	rtcb	93	93.404	ENSOCUG00000008270	RTCB	96	93.404	Oryctolagus_cuniculus
ENSOMEG00000021278	rtcb	100	98.812	ENSORLG00000020093	rtcb	100	98.812	Oryzias_latipes
ENSOMEG00000021278	rtcb	100	98.812	ENSORLG00020003706	rtcb	100	98.812	Oryzias_latipes_hni
ENSOMEG00000021278	rtcb	100	99.010	ENSORLG00015002968	rtcb	100	99.010	Oryzias_latipes_hsok
ENSOMEG00000021278	rtcb	100	92.871	ENSOGAG00000001425	RTCB	100	92.871	Otolemur_garnettii
ENSOMEG00000021278	rtcb	100	93.663	ENSOARG00000018008	RTCB	100	93.663	Ovis_aries
ENSOMEG00000021278	rtcb	100	93.663	ENSPPAG00000028667	RTCB	100	93.663	Pan_paniscus
ENSOMEG00000021278	rtcb	100	93.663	ENSPPRG00000004038	RTCB	100	93.663	Panthera_pardus
ENSOMEG00000021278	rtcb	94	89.684	ENSPTIG00000020499	RTCB	97	90.737	Panthera_tigris_altaica
ENSOMEG00000021278	rtcb	100	93.663	ENSPTRG00000014287	RTCB	100	93.663	Pan_troglodytes
ENSOMEG00000021278	rtcb	100	93.465	ENSPANG00000016035	RTCB	100	93.465	Papio_anubis
ENSOMEG00000021278	rtcb	100	94.257	ENSPKIG00000001881	rtcb	100	94.257	Paramormyrops_kingsleyae
ENSOMEG00000021278	rtcb	91	93.913	ENSPSIG00000011690	RTCB	100	93.913	Pelodiscus_sinensis
ENSOMEG00000021278	rtcb	100	96.040	ENSPMGG00000016672	rtcb	100	96.040	Periophthalmus_magnuspinnatus
ENSOMEG00000021278	rtcb	100	93.267	ENSPEMG00000019548	Rtcb	100	93.267	Peromyscus_maniculatus_bairdii
ENSOMEG00000021278	rtcb	100	90.495	ENSPMAG00000005657	rtcb	100	90.495	Petromyzon_marinus
ENSOMEG00000021278	rtcb	100	93.861	ENSPCIG00000009467	RTCB	100	93.861	Phascolarctos_cinereus
ENSOMEG00000021278	rtcb	100	96.832	ENSPFOG00000003058	rtcb	100	96.832	Poecilia_formosa
ENSOMEG00000021278	rtcb	100	96.634	ENSPLAG00000017663	rtcb	100	96.634	Poecilia_latipinna
ENSOMEG00000021278	rtcb	100	96.832	ENSPMEG00000006227	rtcb	100	96.832	Poecilia_mexicana
ENSOMEG00000021278	rtcb	100	96.238	ENSPREG00000018467	rtcb	100	96.238	Poecilia_reticulata
ENSOMEG00000021278	rtcb	100	93.663	ENSPPYG00000011752	RTCB	100	93.663	Pongo_abelii
ENSOMEG00000021278	rtcb	93	76.907	ENSPCAG00000013641	RTCB	100	76.907	Procavia_capensis
ENSOMEG00000021278	rtcb	100	93.663	ENSPCOG00000017243	RTCB	100	93.663	Propithecus_coquereli
ENSOMEG00000021278	rtcb	93	92.553	ENSPVAG00000002380	RTCB	100	92.553	Pteropus_vampyrus
ENSOMEG00000021278	rtcb	100	95.446	ENSPNYG00000022760	rtcb	100	95.446	Pundamilia_nyererei
ENSOMEG00000021278	rtcb	100	95.248	ENSPNAG00000009209	rtcb	100	95.248	Pygocentrus_nattereri
ENSOMEG00000021278	rtcb	100	93.267	ENSRNOG00000004813	Rtcb	100	93.267	Rattus_norvegicus
ENSOMEG00000021278	rtcb	100	85.573	ENSRBIG00000042090	RTCB	100	85.573	Rhinopithecus_bieti
ENSOMEG00000021278	rtcb	100	88.911	ENSSBOG00000020085	-	100	88.911	Saimiri_boliviensis_boliviensis
ENSOMEG00000021278	rtcb	94	94.515	ENSSHAG00000016277	RTCB	100	94.515	Sarcophilus_harrisii
ENSOMEG00000021278	rtcb	100	95.050	ENSSFOG00015000763	rtcb	100	95.050	Scleropages_formosus
ENSOMEG00000021278	rtcb	100	93.069	ENSSFOG00015011572	RTCB	100	93.069	Scleropages_formosus
ENSOMEG00000021278	rtcb	100	92.673	ENSSMAG00000005096	rtcb	100	92.673	Scophthalmus_maximus
ENSOMEG00000021278	rtcb	100	95.050	ENSSDUG00000012605	rtcb	100	95.050	Seriola_dumerili
ENSOMEG00000021278	rtcb	100	95.248	ENSSLDG00000019458	rtcb	100	95.248	Seriola_lalandi_dorsalis
ENSOMEG00000021278	rtcb	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSOMEG00000021278	rtcb	100	92.673	ENSSPUG00000012814	RTCB	100	92.673	Sphenodon_punctatus
ENSOMEG00000021278	rtcb	100	96.238	ENSSPAG00000004623	rtcb	100	96.238	Stegastes_partitus
ENSOMEG00000021278	rtcb	100	93.663	ENSSSCG00000000158	RTCB	100	93.663	Sus_scrofa
ENSOMEG00000021278	rtcb	100	93.861	ENSTGUG00000010947	RTCB	99	93.861	Taeniopygia_guttata
ENSOMEG00000021278	rtcb	91	96.739	ENSTRUG00000009880	rtcb	100	96.739	Takifugu_rubripes
ENSOMEG00000021278	rtcb	100	94.455	ENSTNIG00000002484	rtcb	100	94.455	Tetraodon_nigroviridis
ENSOMEG00000021278	rtcb	100	80.594	ENSTBEG00000004418	RTCB	100	80.594	Tupaia_belangeri
ENSOMEG00000021278	rtcb	93	92.979	ENSTTRG00000006417	RTCB	100	92.979	Tursiops_truncatus
ENSOMEG00000021278	rtcb	100	93.663	ENSUAMG00000022792	RTCB	100	93.663	Ursus_americanus
ENSOMEG00000021278	rtcb	100	93.663	ENSUMAG00000017225	RTCB	100	93.663	Ursus_maritimus
ENSOMEG00000021278	rtcb	100	93.465	ENSVPAG00000005375	RTCB	100	93.465	Vicugna_pacos
ENSOMEG00000021278	rtcb	100	93.663	ENSVVUG00000023408	RTCB	100	94.103	Vulpes_vulpes
ENSOMEG00000021278	rtcb	100	92.673	ENSXETG00000011523	rtcb	100	92.673	Xenopus_tropicalis
ENSOMEG00000021278	rtcb	100	96.436	ENSXMAG00000002855	rtcb	100	96.436	Xiphophorus_maculatus