EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000021303 (Gene tree)
Gene ID: 112152991
Gene Symbol: clp1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3055 bases
Position: chrNVQA01000017.1:12566069-12569123
Accession: 112152991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000034586	Clp1	PF06807.14	1.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000035700	-	1832	-	ENSOMEP00000034586	441 (aa)	XP_024138619	UPI000CF7DA44

Gene Model

Click here to download ENSOMEG00000021303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000021303's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000021303	clp1	99	74.943	ENSG00000172409	CLP1	99	75.406	Homo_sapiens
ENSOMEG00000021303	clp1	100	94.331	ENSAPOG00000008242	clp1	100	94.331	Acanthochromis_polyacanthus
ENSOMEG00000021303	clp1	99	74.713	ENSAMEG00000014551	CLP1	99	74.713	Ailuropoda_melanoleuca
ENSOMEG00000021303	clp1	100	93.878	ENSACIG00000006310	clp1	99	93.878	Amphilophus_citrinellus
ENSOMEG00000021303	clp1	100	94.558	ENSAOCG00000010681	clp1	100	94.558	Amphiprion_ocellaris
ENSOMEG00000021303	clp1	100	94.558	ENSAPEG00000012165	clp1	100	94.558	Amphiprion_percula
ENSOMEG00000021303	clp1	100	93.878	ENSATEG00000012374	clp1	100	93.878	Anabas_testudineus
ENSOMEG00000021303	clp1	96	76.179	ENSACAG00000007139	CLP1	98	76.179	Anolis_carolinensis
ENSOMEG00000021303	clp1	100	73.923	ENSANAG00000034935	CLP1	99	75.406	Aotus_nancymaae
ENSOMEG00000021303	clp1	100	94.104	ENSACLG00000013573	clp1	100	94.104	Astatotilapia_calliptera
ENSOMEG00000021303	clp1	95	87.500	ENSAMXG00000014194	clp1	98	87.500	Astyanax_mexicanus
ENSOMEG00000021303	clp1	98	74.942	ENSBTAG00000006493	CLP1	99	74.942	Bos_taurus
ENSOMEG00000021303	clp1	95	47.754	WBGene00010304	clpf-1	97	47.754	Caenorhabditis_elegans
ENSOMEG00000021303	clp1	100	73.923	ENSCJAG00000008748	CLP1	99	75.406	Callithrix_jacchus
ENSOMEG00000021303	clp1	98	74.942	ENSCAFG00000007815	CLP1	99	74.942	Canis_familiaris
ENSOMEG00000021303	clp1	98	74.942	ENSCAFG00020000903	CLP1	99	74.942	Canis_lupus_dingo
ENSOMEG00000021303	clp1	98	75.406	ENSCHIG00000023497	CLP1	99	75.406	Capra_hircus
ENSOMEG00000021303	clp1	99	74.943	ENSTSYG00000006824	CLP1	99	74.943	Carlito_syrichta
ENSOMEG00000021303	clp1	99	74.943	ENSCAPG00000009703	CLP1	99	74.943	Cavia_aperea
ENSOMEG00000021303	clp1	96	76.179	ENSCPOG00000012554	CLP1	99	76.179	Cavia_porcellus
ENSOMEG00000021303	clp1	99	74.943	ENSCCAG00000031957	CLP1	99	74.943	Cebus_capucinus
ENSOMEG00000021303	clp1	100	73.923	ENSCATG00000044628	CLP1	99	75.406	Cercocebus_atys
ENSOMEG00000021303	clp1	98	75.174	ENSCLAG00000004094	CLP1	99	75.174	Chinchilla_lanigera
ENSOMEG00000021303	clp1	98	75.406	ENSCSAG00000005994	CLP1	99	75.406	Chlorocebus_sabaeus
ENSOMEG00000021303	clp1	98	74.478	ENSCPBG00000016843	CLP1	99	74.478	Chrysemys_picta_bellii
ENSOMEG00000021303	clp1	95	62.053	ENSCING00000003779	-	96	62.053	Ciona_intestinalis
ENSOMEG00000021303	clp1	95	62.440	ENSCSAVG00000003437	-	96	62.440	Ciona_savignyi
ENSOMEG00000021303	clp1	99	74.943	ENSCANG00000034335	CLP1	99	75.406	Colobus_angolensis_palliatus
ENSOMEG00000021303	clp1	99	74.713	ENSCGRG00001002227	CLP1	99	74.713	Cricetulus_griseus_chok1gshd
ENSOMEG00000021303	clp1	99	74.713	ENSCGRG00000004328	CLP1	99	74.713	Cricetulus_griseus_crigri
ENSOMEG00000021303	clp1	100	92.517	ENSCSEG00000008614	clp1	100	92.517	Cynoglossus_semilaevis
ENSOMEG00000021303	clp1	100	93.651	ENSCVAG00000020101	clp1	100	93.651	Cyprinodon_variegatus
ENSOMEG00000021303	clp1	100	84.529	ENSDARG00000063663	clp1	99	85.488	Danio_rerio
ENSOMEG00000021303	clp1	98	74.884	ENSDNOG00000042415	CLP1	89	74.884	Dasypus_novemcinctus
ENSOMEG00000021303	clp1	99	74.943	ENSDORG00000014685	Clp1	99	74.943	Dipodomys_ordii
ENSOMEG00000021303	clp1	95	54.157	FBgn0033842	cbc	97	54.157	Drosophila_melanogaster
ENSOMEG00000021303	clp1	98	75.174	ENSETEG00000003009	CLP1	99	75.174	Echinops_telfairi
ENSOMEG00000021303	clp1	98	63.741	ENSEBUG00000011648	clp1	100	63.741	Eptatretus_burgeri
ENSOMEG00000021303	clp1	98	75.406	ENSEASG00005002093	CLP1	99	75.406	Equus_asinus_asinus
ENSOMEG00000021303	clp1	99	75.172	ENSECAG00000011597	CLP1	99	75.406	Equus_caballus
ENSOMEG00000021303	clp1	99	74.483	ENSEEUG00000012771	CLP1	99	74.483	Erinaceus_europaeus
ENSOMEG00000021303	clp1	95	87.028	ENSELUG00000024048	clp1	100	84.081	Esox_lucius
ENSOMEG00000021303	clp1	99	74.713	ENSFCAG00000006633	CLP1	99	74.942	Felis_catus
ENSOMEG00000021303	clp1	98	75.406	ENSFALG00000011145	CLP1	99	75.406	Ficedula_albicollis
ENSOMEG00000021303	clp1	98	75.174	ENSFDAG00000000234	CLP1	99	75.174	Fukomys_damarensis
ENSOMEG00000021303	clp1	100	94.331	ENSFHEG00000014760	CLP1	100	94.331	Fundulus_heteroclitus
ENSOMEG00000021303	clp1	100	87.982	ENSGMOG00000019340	clp1	100	87.982	Gadus_morhua
ENSOMEG00000021303	clp1	98	75.174	ENSGALG00000007370	CLP1	99	75.174	Gallus_gallus
ENSOMEG00000021303	clp1	100	94.104	ENSGAFG00000003020	clp1	100	94.104	Gambusia_affinis
ENSOMEG00000021303	clp1	100	92.744	ENSGACG00000017832	clp1	100	92.744	Gasterosteus_aculeatus
ENSOMEG00000021303	clp1	98	74.478	ENSGAGG00000013279	CLP1	99	74.478	Gopherus_agassizii
ENSOMEG00000021303	clp1	99	74.943	ENSGGOG00000023006	CLP1	99	75.406	Gorilla_gorilla
ENSOMEG00000021303	clp1	100	94.331	ENSHBUG00000010436	clp1	100	94.331	Haplochromis_burtoni
ENSOMEG00000021303	clp1	98	75.174	ENSHGLG00000009914	CLP1	99	75.174	Heterocephalus_glaber_female
ENSOMEG00000021303	clp1	98	75.174	ENSHGLG00100006105	CLP1	99	75.174	Heterocephalus_glaber_male
ENSOMEG00000021303	clp1	100	92.744	ENSHCOG00000010072	clp1	100	92.744	Hippocampus_comes
ENSOMEG00000021303	clp1	100	84.633	ENSIPUG00000016238	clp1	99	84.633	Ictalurus_punctatus
ENSOMEG00000021303	clp1	98	75.174	ENSSTOG00000029257	CLP1	99	75.174	Ictidomys_tridecemlineatus
ENSOMEG00000021303	clp1	98	74.710	ENSJJAG00000023691	Clp1	99	74.710	Jaculus_jaculus
ENSOMEG00000021303	clp1	100	94.104	ENSKMAG00000011990	clp1	100	94.104	Kryptolebias_marmoratus
ENSOMEG00000021303	clp1	100	93.424	ENSLBEG00000010201	clp1	100	93.424	Labrus_bergylta
ENSOMEG00000021303	clp1	96	75.236	ENSLACG00000003160	CLP1	98	75.236	Latimeria_chalumnae
ENSOMEG00000021303	clp1	71	85.093	ENSLOCG00000008074	clp1	100	85.093	Lepisosteus_oculatus
ENSOMEG00000021303	clp1	98	74.942	ENSLAFG00000014907	CLP1	99	74.942	Loxodonta_africana
ENSOMEG00000021303	clp1	99	74.943	ENSMFAG00000046074	CLP1	99	75.406	Macaca_fascicularis
ENSOMEG00000021303	clp1	99	74.943	ENSMMUG00000038007	CLP1	99	74.943	Macaca_mulatta
ENSOMEG00000021303	clp1	98	75.406	ENSMNEG00000000259	CLP1	99	75.406	Macaca_nemestrina
ENSOMEG00000021303	clp1	99	74.943	ENSMLEG00000043556	CLP1	99	75.406	Mandrillus_leucophaeus
ENSOMEG00000021303	clp1	100	94.331	ENSMAMG00000002149	clp1	100	94.331	Mastacembelus_armatus
ENSOMEG00000021303	clp1	100	94.104	ENSMZEG00005002850	clp1	100	94.104	Maylandia_zebra
ENSOMEG00000021303	clp1	98	75.174	ENSMGAG00000009643	CLP1	99	75.174	Meleagris_gallopavo
ENSOMEG00000021303	clp1	99	74.253	ENSMAUG00000016261	Clp1	99	74.253	Mesocricetus_auratus
ENSOMEG00000021303	clp1	99	74.260	ENSMICG00000004895	CLP1	99	74.942	Microcebus_murinus
ENSOMEG00000021303	clp1	99	74.943	ENSMOCG00000005498	Clp1	99	74.943	Microtus_ochrogaster
ENSOMEG00000021303	clp1	100	91.837	ENSMMOG00000003229	clp1	100	91.837	Mola_mola
ENSOMEG00000021303	clp1	96	76.179	ENSMODG00000024148	-	98	76.179	Monodelphis_domestica
ENSOMEG00000021303	clp1	96	76.179	ENSMODG00000020107	-	98	76.179	Monodelphis_domestica
ENSOMEG00000021303	clp1	100	95.011	ENSMALG00000014239	clp1	100	95.011	Monopterus_albus
ENSOMEG00000021303	clp1	99	74.713	MGP_CAROLIEiJ_G0023726	Clp1	99	74.713	Mus_caroli
ENSOMEG00000021303	clp1	99	74.713	ENSMUSG00000027079	Clp1	99	74.713	Mus_musculus
ENSOMEG00000021303	clp1	99	74.483	MGP_PahariEiJ_G0025177	Clp1	99	74.483	Mus_pahari
ENSOMEG00000021303	clp1	99	74.713	MGP_SPRETEiJ_G0024646	Clp1	99	74.713	Mus_spretus
ENSOMEG00000021303	clp1	98	74.942	ENSMPUG00000000268	CLP1	99	74.942	Mustela_putorius_furo
ENSOMEG00000021303	clp1	99	75.172	ENSMLUG00000007904	CLP1	99	75.172	Myotis_lucifugus
ENSOMEG00000021303	clp1	98	74.710	ENSNGAG00000006165	Clp1	99	74.710	Nannospalax_galili
ENSOMEG00000021303	clp1	100	93.651	ENSNBRG00000005225	clp1	100	93.651	Neolamprologus_brichardi
ENSOMEG00000021303	clp1	80	69.412	ENSNLEG00000012809	-	99	69.412	Nomascus_leucogenys
ENSOMEG00000021303	clp1	98	74.654	ENSMEUG00000010949	CLP1	100	74.654	Notamacropus_eugenii
ENSOMEG00000021303	clp1	69	77.228	ENSOPRG00000007329	CLP1	100	77.228	Ochotona_princeps
ENSOMEG00000021303	clp1	98	75.174	ENSODEG00000011410	CLP1	99	75.174	Octodon_degus
ENSOMEG00000021303	clp1	100	94.104	ENSONIG00000005089	clp1	100	94.104	Oreochromis_niloticus
ENSOMEG00000021303	clp1	99	74.943	ENSOCUG00000007045	CLP1	99	74.943	Oryctolagus_cuniculus
ENSOMEG00000021303	clp1	100	98.186	ENSORLG00000003647	clp1	100	98.186	Oryzias_latipes
ENSOMEG00000021303	clp1	100	97.959	ENSORLG00020016676	clp1	100	97.959	Oryzias_latipes_hni
ENSOMEG00000021303	clp1	100	98.186	ENSORLG00015019484	clp1	100	98.186	Oryzias_latipes_hsok
ENSOMEG00000021303	clp1	98	74.942	ENSOGAG00000004508	CLP1	99	74.942	Otolemur_garnettii
ENSOMEG00000021303	clp1	98	74.246	ENSOARG00000010145	CLP1	98	74.246	Ovis_aries
ENSOMEG00000021303	clp1	99	74.943	ENSPPAG00000041519	CLP1	99	75.406	Pan_paniscus
ENSOMEG00000021303	clp1	98	74.942	ENSPPRG00000006135	CLP1	99	74.942	Panthera_pardus
ENSOMEG00000021303	clp1	98	74.942	ENSPTIG00000015866	CLP1	99	74.942	Panthera_tigris_altaica
ENSOMEG00000021303	clp1	98	75.406	ENSPTRG00000047318	CLP1	99	75.406	Pan_troglodytes
ENSOMEG00000021303	clp1	99	74.943	ENSPANG00000017078	CLP1	98	74.943	Papio_anubis
ENSOMEG00000021303	clp1	100	84.719	ENSPKIG00000007697	clp1	100	84.944	Paramormyrops_kingsleyae
ENSOMEG00000021303	clp1	93	71.814	ENSPSIG00000005468	CLP1	99	71.814	Pelodiscus_sinensis
ENSOMEG00000021303	clp1	100	91.383	ENSPMGG00000012171	clp1	100	91.383	Periophthalmus_magnuspinnatus
ENSOMEG00000021303	clp1	99	74.943	ENSPEMG00000011213	-	99	74.943	Peromyscus_maniculatus_bairdii
ENSOMEG00000021303	clp1	98	66.898	ENSPMAG00000006707	clp1	99	66.898	Petromyzon_marinus
ENSOMEG00000021303	clp1	96	76.415	ENSPCIG00000011899	CLP1	98	76.415	Phascolarctos_cinereus
ENSOMEG00000021303	clp1	100	94.104	ENSPFOG00000008169	clp1	100	94.104	Poecilia_formosa
ENSOMEG00000021303	clp1	100	94.104	ENSPLAG00000022388	clp1	100	94.104	Poecilia_latipinna
ENSOMEG00000021303	clp1	100	94.104	ENSPMEG00000021088	clp1	100	94.104	Poecilia_mexicana
ENSOMEG00000021303	clp1	100	94.104	ENSPREG00000017802	clp1	100	94.104	Poecilia_reticulata
ENSOMEG00000021303	clp1	52	73.799	ENSPPYG00000003266	-	100	73.799	Pongo_abelii
ENSOMEG00000021303	clp1	99	74.713	ENSPCOG00000000360	CLP1	99	74.713	Propithecus_coquereli
ENSOMEG00000021303	clp1	98	74.942	ENSPVAG00000016270	CLP1	99	74.942	Pteropus_vampyrus
ENSOMEG00000021303	clp1	100	94.331	ENSPNYG00000017274	clp1	99	94.331	Pundamilia_nyererei
ENSOMEG00000021303	clp1	100	84.821	ENSPNAG00000026460	clp1	100	85.268	Pygocentrus_nattereri
ENSOMEG00000021303	clp1	99	74.713	ENSRNOG00000007416	Clp1	99	74.713	Rattus_norvegicus
ENSOMEG00000021303	clp1	98	75.406	ENSRBIG00000018191	CLP1	99	75.406	Rhinopithecus_bieti
ENSOMEG00000021303	clp1	99	74.943	ENSRROG00000039265	CLP1	99	75.406	Rhinopithecus_roxellana
ENSOMEG00000021303	clp1	94	62.319	ENSSBOG00000010558	-	93	62.319	Saimiri_boliviensis_boliviensis
ENSOMEG00000021303	clp1	98	75.406	ENSSBOG00000032517	-	99	75.406	Saimiri_boliviensis_boliviensis
ENSOMEG00000021303	clp1	96	76.415	ENSSHAG00000015695	CLP1	98	76.415	Sarcophilus_harrisii
ENSOMEG00000021303	clp1	100	83.223	ENSSFOG00015000628	clp1	100	83.223	Scleropages_formosus
ENSOMEG00000021303	clp1	100	94.331	ENSSMAG00000019423	clp1	99	94.331	Scophthalmus_maximus
ENSOMEG00000021303	clp1	100	94.558	ENSSDUG00000014495	clp1	100	94.558	Seriola_dumerili
ENSOMEG00000021303	clp1	100	94.331	ENSSLDG00000000937	clp1	100	94.331	Seriola_lalandi_dorsalis
ENSOMEG00000021303	clp1	52	73.684	ENSSARG00000002459	CLP1	100	73.684	Sorex_araneus
ENSOMEG00000021303	clp1	98	74.478	ENSSPUG00000016811	CLP1	99	74.478	Sphenodon_punctatus
ENSOMEG00000021303	clp1	100	94.104	ENSSPAG00000016052	clp1	100	94.104	Stegastes_partitus
ENSOMEG00000021303	clp1	98	74.942	ENSSSCG00000031442	CLP1	99	74.942	Sus_scrofa
ENSOMEG00000021303	clp1	98	75.174	ENSTGUG00000007002	CLP1	99	75.174	Taeniopygia_guttata
ENSOMEG00000021303	clp1	100	89.116	ENSTRUG00000012602	clp1	100	89.116	Takifugu_rubripes
ENSOMEG00000021303	clp1	100	88.435	ENSTNIG00000013125	clp1	100	88.435	Tetraodon_nigroviridis
ENSOMEG00000021303	clp1	98	74.478	ENSTBEG00000009975	CLP1	99	74.478	Tupaia_belangeri
ENSOMEG00000021303	clp1	98	74.942	ENSTTRG00000002096	CLP1	99	74.942	Tursiops_truncatus
ENSOMEG00000021303	clp1	98	74.942	ENSUAMG00000011388	CLP1	99	74.942	Ursus_americanus
ENSOMEG00000021303	clp1	98	74.942	ENSUMAG00000018317	CLP1	99	74.942	Ursus_maritimus
ENSOMEG00000021303	clp1	100	73.923	ENSVVUG00000017138	CLP1	99	73.923	Vulpes_vulpes
ENSOMEG00000021303	clp1	100	69.977	ENSXETG00000007088	clp1	100	70.880	Xenopus_tropicalis
ENSOMEG00000021303	clp1	100	94.331	ENSXCOG00000002287	clp1	100	94.331	Xiphophorus_couchianus
ENSOMEG00000021303	clp1	100	94.331	ENSXMAG00000009783	clp1	100	94.331	Xiphophorus_maculatus