EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000021397 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 10720 bases
Position: chrNVQA01000020.1:23146174-23156893
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000019584	zf-C2H2	PF00096.26	8.2e-45	1	7
ENSOMEP00000019584	zf-C2H2	PF00096.26	8.2e-45	2	7
ENSOMEP00000019584	zf-C2H2	PF00096.26	8.2e-45	3	7
ENSOMEP00000019584	zf-C2H2	PF00096.26	8.2e-45	4	7
ENSOMEP00000019584	zf-C2H2	PF00096.26	8.2e-45	5	7
ENSOMEP00000019584	zf-C2H2	PF00096.26	8.2e-45	6	7
ENSOMEP00000019584	zf-C2H2	PF00096.26	8.2e-45	7	7
ENSOMEP00000019584	zf-met	PF12874.7	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000028867	-	2802	-	ENSOMEP00000019584	933 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000021397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000021397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000021397	-	50	37.276	ENSOMEG00000022322	-	73	39.779
ENSOMEG00000021397	-	51	33.628	ENSOMEG00000000630	-	96	34.759
ENSOMEG00000021397	-	51	43.478	ENSOMEG00000010906	-	83	43.478
ENSOMEG00000021397	-	75	80.686	ENSOMEG00000021420	-	99	80.686

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000021397	-	89	38.462	ENSCVAG00000018494	-	98	38.628	Cyprinodon_variegatus
ENSOMEG00000021397	-	69	55.405	ENSLBEG00000014527	-	96	34.257	Labrus_bergylta