EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000021405 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-284b18.2 (1 of many)
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 9275 bases
Position: chrNVQA01002930.1:1535-10809
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000034656	CSD	PF00313.22	2.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000028874	-	417	-	ENSOMEP00000034656	138 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000021405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000021405's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000021405	si:ch1073-284b18.2	64	85.227	ENSANAG00000029599	-	51	85.227	Aotus_nancymaae
ENSOMEG00000021405	si:ch1073-284b18.2	64	82.955	ENSCHOG00000001682	LIN28B	51	82.022	Choloepus_hoffmanni
ENSOMEG00000021405	si:ch1073-284b18.2	64	81.818	ENSCGRG00001024078	Lin28b	50	59.701	Cricetulus_griseus_chok1gshd
ENSOMEG00000021405	si:ch1073-284b18.2	64	81.818	ENSCGRG00000014674	Lin28b	50	59.701	Cricetulus_griseus_crigri
ENSOMEG00000021405	si:ch1073-284b18.2	64	85.393	ENSDARG00000016999	lin28a	68	86.957	Danio_rerio
ENSOMEG00000021405	si:ch1073-284b18.2	63	82.759	ENSGMOG00000015523	lin28a	63	81.818	Gadus_morhua
ENSOMEG00000021405	si:ch1073-284b18.2	64	78.409	ENSGACG00000007826	lin28a	52	79.310	Gasterosteus_aculeatus
ENSOMEG00000021405	si:ch1073-284b18.2	96	60.150	ENSSTOG00000022629	-	67	59.398	Ictidomys_tridecemlineatus
ENSOMEG00000021405	si:ch1073-284b18.2	64	85.227	ENSLACG00000004053	LIN28B	52	74.468	Latimeria_chalumnae
ENSOMEG00000021405	si:ch1073-284b18.2	64	85.227	MGP_CAROLIEiJ_G0026603	Lin28a	100	86.667	Mus_caroli
ENSOMEG00000021405	si:ch1073-284b18.2	64	85.227	ENSMUSG00000050966	Lin28a	100	86.667	Mus_musculus
ENSOMEG00000021405	si:ch1073-284b18.2	64	84.091	MGP_PahariEiJ_G0028936	Lin28a	100	85.333	Mus_pahari
ENSOMEG00000021405	si:ch1073-284b18.2	64	85.227	MGP_SPRETEiJ_G0027583	Lin28a	100	86.667	Mus_spretus
ENSOMEG00000021405	si:ch1073-284b18.2	64	82.955	ENSSBOG00000005545	-	52	82.955	Saimiri_boliviensis_boliviensis
ENSOMEG00000021405	si:ch1073-284b18.2	64	61.364	ENSSARG00000013135	-	66	61.364	Sorex_araneus
ENSOMEG00000021405	si:ch1073-284b18.2	64	73.864	ENSTNIG00000009802	lin28a	54	73.864	Tetraodon_nigroviridis
ENSOMEG00000021405	si:ch1073-284b18.2	64	85.227	ENSVPAG00000008073	LIN28A	72	85.227	Vicugna_pacos