EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000021420 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 8540 bases
Position: chrNVQA01000020.1:23134371-23142910
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000019599	zf-C2H2	PF00096.26	1.9e-43	1	5
ENSOMEP00000019599	zf-C2H2	PF00096.26	1.9e-43	2	5
ENSOMEP00000019599	zf-C2H2	PF00096.26	1.9e-43	3	5
ENSOMEP00000019599	zf-C2H2	PF00096.26	1.9e-43	4	5
ENSOMEP00000019599	zf-C2H2	PF00096.26	1.9e-43	5	5
ENSOMEP00000019608	zf-C2H2	PF00096.26	4.4e-39	1	4
ENSOMEP00000019608	zf-C2H2	PF00096.26	4.4e-39	2	4
ENSOMEP00000019608	zf-C2H2	PF00096.26	4.4e-39	3	4
ENSOMEP00000019608	zf-C2H2	PF00096.26	4.4e-39	4	4
ENSOMEP00000019599	zf-met	PF12874.7	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000028889	-	2938	-	ENSOMEP00000019608	546 (aa)	-	-
ENSOMET00000028887	-	2308	-	ENSOMEP00000019599	550 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000021420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000021420's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000021420	-	89	38.075	ENSOMEG00000019179	-	98	36.218
ENSOMEG00000021420	-	71	37.770	ENSOMEG00000012844	-	99	37.389
ENSOMEG00000021420	-	61	33.445	ENSOMEG00000011926	zbtb17	57	31.138
ENSOMEG00000021420	-	60	36.517	ENSOMEG00000011664	-	65	36.517
ENSOMEG00000021420	-	61	34.125	ENSOMEG00000005143	prdm5	74	33.739
ENSOMEG00000021420	-	68	42.188	ENSOMEG00000009440	-	83	44.000
ENSOMEG00000021420	-	68	43.902	ENSOMEG00000004087	-	66	43.200
ENSOMEG00000021420	-	63	40.171	ENSOMEG00000023310	-	93	33.493
ENSOMEG00000021420	-	65	43.966	ENSOMEG00000014676	-	90	43.966
ENSOMEG00000021420	-	60	41.250	ENSOMEG00000015149	GFI1B	80	39.877
ENSOMEG00000021420	-	82	39.456	ENSOMEG00000021134	-	52	40.686
ENSOMEG00000021420	-	78	39.738	ENSOMEG00000018508	-	89	42.941
ENSOMEG00000021420	-	70	39.444	ENSOMEG00000007730	-	85	37.624
ENSOMEG00000021420	-	63	44.138	ENSOMEG00000010906	-	52	41.718
ENSOMEG00000021420	-	59	40.146	ENSOMEG00000019352	-	65	36.196
ENSOMEG00000021420	-	60	45.775	ENSOMEG00000005839	-	83	35.200
ENSOMEG00000021420	-	67	36.397	ENSOMEG00000013244	-	86	37.358
ENSOMEG00000021420	-	62	40.642	ENSOMEG00000018279	-	75	41.818
ENSOMEG00000021420	-	74	35.897	ENSOMEG00000013677	-	85	41.000
ENSOMEG00000021420	-	99	80.686	ENSOMEG00000021397	-	75	80.686
ENSOMEG00000021420	-	86	42.636	ENSOMEG00000021399	-	89	42.636
ENSOMEG00000021420	-	69	38.014	ENSOMEG00000011876	-	70	42.328
ENSOMEG00000021420	-	82	40.758	ENSOMEG00000004586	-	97	41.935
ENSOMEG00000021420	-	65	37.037	ENSOMEG00000000376	si:ch211-216l23.1	93	40.000
ENSOMEG00000021420	-	80	41.502	ENSOMEG00000022915	-	89	43.529
ENSOMEG00000021420	-	61	38.095	ENSOMEG00000009377	-	82	37.398
ENSOMEG00000021420	-	79	44.167	ENSOMEG00000019519	-	88	43.333
ENSOMEG00000021420	-	68	37.500	ENSOMEG00000012621	-	90	39.456
ENSOMEG00000021420	-	80	40.000	ENSOMEG00000021945	-	90	41.618
ENSOMEG00000021420	-	61	45.312	ENSOMEG00000005578	-	69	45.312
ENSOMEG00000021420	-	85	38.498	ENSOMEG00000013449	-	87	46.377
ENSOMEG00000021420	-	60	38.621	ENSOMEG00000019149	-	60	35.652
ENSOMEG00000021420	-	63	43.662	ENSOMEG00000023293	-	68	34.524
ENSOMEG00000021420	-	62	47.287	ENSOMEG00000002268	-	87	48.062
ENSOMEG00000021420	-	65	40.909	ENSOMEG00000014973	-	99	40.909
ENSOMEG00000021420	-	60	36.742	ENSOMEG00000011681	-	67	35.798
ENSOMEG00000021420	-	61	39.326	ENSOMEG00000003372	-	94	39.326
ENSOMEG00000021420	-	61	38.542	ENSOMEG00000018485	-	72	38.542
ENSOMEG00000021420	-	71	47.518	ENSOMEG00000019437	-	77	46.763
ENSOMEG00000021420	-	70	39.610	ENSOMEG00000021492	-	62	40.972
ENSOMEG00000021420	-	64	33.721	ENSOMEG00000003451	-	68	34.503
ENSOMEG00000021420	-	62	36.777	ENSOMEG00000012273	-	72	35.455
ENSOMEG00000021420	-	74	35.880	ENSOMEG00000001622	-	92	35.826
ENSOMEG00000021420	-	62	39.333	ENSOMEG00000006301	-	61	38.411
ENSOMEG00000021420	-	65	43.511	ENSOMEG00000009816	-	100	45.833
ENSOMEG00000021420	-	69	30.534	ENSOMEG00000021903	-	62	30.872
ENSOMEG00000021420	-	60	44.554	ENSOMEG00000007699	-	93	48.684
ENSOMEG00000021420	-	62	34.118	ENSOMEG00000006636	patz1	56	30.570
ENSOMEG00000021420	-	83	35.806	ENSOMEG00000016779	-	95	34.259
ENSOMEG00000021420	-	67	36.824	ENSOMEG00000013842	-	71	36.824
ENSOMEG00000021420	-	61	37.261	ENSOMEG00000008365	-	64	37.261
ENSOMEG00000021420	-	68	40.306	ENSOMEG00000019336	-	94	37.963
ENSOMEG00000021420	-	75	42.254	ENSOMEG00000016026	-	90	41.765
ENSOMEG00000021420	-	81	33.438	ENSOMEG00000021017	-	89	34.808
ENSOMEG00000021420	-	81	49.123	ENSOMEG00000021518	-	97	41.477
ENSOMEG00000021420	-	67	47.863	ENSOMEG00000023820	-	87	51.064
ENSOMEG00000021420	-	80	34.870	ENSOMEG00000008449	-	99	38.323
ENSOMEG00000021420	-	89	30.769	ENSOMEG00000013158	-	72	39.015
ENSOMEG00000021420	-	61	41.071	ENSOMEG00000021998	-	54	41.071
ENSOMEG00000021420	-	62	34.466	ENSOMEG00000022975	-	64	34.466
ENSOMEG00000021420	-	62	34.062	ENSOMEG00000017673	-	82	31.661
ENSOMEG00000021420	-	61	35.268	ENSOMEG00000004514	-	51	34.457
ENSOMEG00000021420	-	63	42.105	ENSOMEG00000001598	-	80	42.105
ENSOMEG00000021420	-	66	33.811	ENSOMEG00000013386	-	71	37.500
ENSOMEG00000021420	-	62	36.909	ENSOMEG00000014364	-	83	36.909
ENSOMEG00000021420	-	61	43.796	ENSOMEG00000004077	-	90	43.796
ENSOMEG00000021420	-	86	35.664	ENSOMEG00000007495	-	83	39.355
ENSOMEG00000021420	-	60	36.757	ENSOMEG00000013894	-	55	36.757
ENSOMEG00000021420	-	60	38.743	ENSOMEG00000021417	-	74	38.743
ENSOMEG00000021420	-	68	37.368	ENSOMEG00000012539	-	95	35.673
ENSOMEG00000021420	-	68	43.103	ENSOMEG00000008445	-	76	43.103
ENSOMEG00000021420	-	88	39.521	ENSOMEG00000018262	-	94	43.925
ENSOMEG00000021420	-	68	40.136	ENSOMEG00000017245	-	82	40.136
ENSOMEG00000021420	-	64	35.235	ENSOMEG00000000196	-	93	35.235
ENSOMEG00000021420	-	61	44.366	ENSOMEG00000006208	-	85	44.366
ENSOMEG00000021420	-	68	38.889	ENSOMEG00000006224	-	75	38.660
ENSOMEG00000021420	-	60	38.272	ENSOMEG00000008352	-	77	38.272
ENSOMEG00000021420	-	60	32.927	ENSOMEG00000011124	-	79	30.909
ENSOMEG00000021420	-	60	45.806	ENSOMEG00000013198	-	88	45.806
ENSOMEG00000021420	-	84	35.959	ENSOMEG00000015591	-	65	35.959
ENSOMEG00000021420	-	67	35.870	ENSOMEG00000003577	-	83	40.952
ENSOMEG00000021420	-	61	37.288	ENSOMEG00000021840	-	88	43.103
ENSOMEG00000021420	-	61	42.614	ENSOMEG00000018735	-	91	36.515
ENSOMEG00000021420	-	74	36.842	ENSOMEG00000015460	-	56	36.437
ENSOMEG00000021420	-	51	35.081	ENSOMEG00000016285	-	75	35.081
ENSOMEG00000021420	-	60	36.782	ENSOMEG00000015669	znf574	67	31.923
ENSOMEG00000021420	-	56	35.075	ENSOMEG00000019346	-	99	35.075
ENSOMEG00000021420	-	68	34.783	ENSOMEG00000015658	znf646	88	34.783
ENSOMEG00000021420	-	68	33.631	ENSOMEG00000002622	-	71	33.631
ENSOMEG00000021420	-	71	33.929	ENSOMEG00000018871	-	78	34.677
ENSOMEG00000021420	-	60	41.361	ENSOMEG00000018597	-	88	40.099
ENSOMEG00000021420	-	66	35.925	ENSOMEG00000023331	-	98	34.848
ENSOMEG00000021420	-	80	41.818	ENSOMEG00000010418	-	53	36.279
ENSOMEG00000021420	-	95	43.662	ENSOMEG00000009071	-	99	47.500
ENSOMEG00000021420	-	74	40.306	ENSOMEG00000010398	-	87	39.669
ENSOMEG00000021420	-	64	35.932	ENSOMEG00000006511	-	93	37.015
ENSOMEG00000021420	-	66	38.571	ENSOMEG00000005156	-	92	37.785
ENSOMEG00000021420	-	60	36.570	ENSOMEG00000013868	-	70	36.570
ENSOMEG00000021420	-	68	35.943	ENSOMEG00000016747	-	80	35.905
ENSOMEG00000021420	-	68	37.870	ENSOMEG00000010745	-	81	37.725
ENSOMEG00000021420	-	60	42.051	ENSOMEG00000010744	-	62	42.051
ENSOMEG00000021420	-	66	35.887	ENSOMEG00000020870	-	94	37.092
ENSOMEG00000021420	-	80	43.353	ENSOMEG00000000342	-	54	43.353
ENSOMEG00000021420	-	68	38.859	ENSOMEG00000023652	-	99	40.533
ENSOMEG00000021420	-	62	43.956	ENSOMEG00000009568	-	99	45.161
ENSOMEG00000021420	-	68	43.357	ENSOMEG00000018498	-	85	43.357
ENSOMEG00000021420	-	63	39.643	ENSOMEG00000015179	-	67	39.643
ENSOMEG00000021420	-	82	32.044	ENSOMEG00000000630	-	69	39.614
ENSOMEG00000021420	-	61	38.202	ENSOMEG00000019853	-	95	37.500
ENSOMEG00000021420	-	66	38.202	ENSOMEG00000016463	-	64	38.202
ENSOMEG00000021420	-	68	30.769	ENSOMEG00000010575	zgc:66448	91	30.968
ENSOMEG00000021420	-	63	38.075	ENSOMEG00000022322	-	77	38.075
ENSOMEG00000021420	-	60	39.035	ENSOMEG00000007919	-	52	39.035
ENSOMEG00000021420	-	60	40.602	ENSOMEG00000012403	-	56	43.548
ENSOMEG00000021420	-	80	39.033	ENSOMEG00000017797	-	69	37.407
ENSOMEG00000021420	-	60	41.228	ENSOMEG00000012263	-	74	37.405
ENSOMEG00000021420	-	69	34.188	ENSOMEG00000018562	-	97	36.335
ENSOMEG00000021420	-	61	38.991	ENSOMEG00000014882	-	81	39.048
ENSOMEG00000021420	-	65	34.795	ENSOMEG00000010078	-	73	33.542
ENSOMEG00000021420	-	67	36.119	ENSOMEG00000018691	-	95	36.410
ENSOMEG00000021420	-	85	36.607	ENSOMEG00000002639	-	95	39.104
ENSOMEG00000021420	-	69	35.081	ENSOMEG00000010952	-	86	37.647
ENSOMEG00000021420	-	61	43.452	ENSOMEG00000021506	-	84	43.452
ENSOMEG00000021420	-	80	41.121	ENSOMEG00000009243	-	67	42.268
ENSOMEG00000021420	-	60	38.222	ENSOMEG00000000829	-	83	38.222
ENSOMEG00000021420	-	60	43.548	ENSOMEG00000009242	-	59	44.186
ENSOMEG00000021420	-	67	40.310	ENSOMEG00000000934	-	86	37.247
ENSOMEG00000021420	-	61	38.153	ENSOMEG00000012614	-	53	35.268
ENSOMEG00000021420	-	61	38.667	ENSOMEG00000015640	-	74	38.053
ENSOMEG00000021420	-	70	38.798	ENSOMEG00000016808	-	83	40.223
ENSOMEG00000021420	-	61	44.355	ENSOMEG00000021676	-	92	37.891
ENSOMEG00000021420	-	69	43.350	ENSOMEG00000023744	-	95	45.161
ENSOMEG00000021420	-	61	42.520	ENSOMEG00000003401	-	55	44.186
ENSOMEG00000021420	-	60	42.169	ENSOMEG00000012220	e4f1	65	34.161
ENSOMEG00000021420	-	85	38.671	ENSOMEG00000022620	-	99	39.286
ENSOMEG00000021420	-	68	40.310	ENSOMEG00000019379	-	95	38.192
ENSOMEG00000021420	-	65	33.904	ENSOMEG00000010300	-	86	34.454
ENSOMEG00000021420	-	66	39.264	ENSOMEG00000020951	-	94	38.652
ENSOMEG00000021420	-	60	43.056	ENSOMEG00000010371	-	97	41.270
ENSOMEG00000021420	-	61	39.456	ENSOMEG00000020893	-	96	39.456
ENSOMEG00000021420	-	70	36.957	ENSOMEG00000006591	snai2	62	36.957
ENSOMEG00000021420	-	60	42.857	ENSOMEG00000004527	-	84	42.405
ENSOMEG00000021420	-	79	40.000	ENSOMEG00000010752	-	62	37.874
ENSOMEG00000021420	-	67	33.851	ENSOMEG00000010068	-	61	34.384
ENSOMEG00000021420	-	60	39.490	ENSOMEG00000016766	-	79	38.356
ENSOMEG00000021420	-	61	35.145	ENSOMEG00000019840	-	60	35.870
ENSOMEG00000021420	-	60	46.087	ENSOMEG00000015891	-	51	43.802
ENSOMEG00000021420	-	71	44.037	ENSOMEG00000019227	-	86	39.860
ENSOMEG00000021420	-	62	36.792	ENSOMEG00000016295	-	81	35.769
ENSOMEG00000021420	-	69	36.552	ENSOMEG00000021556	-	60	36.552
ENSOMEG00000021420	-	79	41.379	ENSOMEG00000011566	-	88	44.615
ENSOMEG00000021420	-	84	44.604	ENSOMEG00000010638	-	88	42.609
ENSOMEG00000021420	-	65	32.154	ENSOMEG00000012915	znf319b	95	33.119
ENSOMEG00000021420	-	64	45.455	ENSOMEG00000023777	-	94	45.455
ENSOMEG00000021420	-	68	33.721	ENSOMEG00000017762	zbtb48	53	31.522
ENSOMEG00000021420	-	60	35.599	ENSOMEG00000019220	-	76	34.304
ENSOMEG00000021420	-	69	40.559	ENSOMEG00000012366	-	82	40.559
ENSOMEG00000021420	-	70	42.063	ENSOMEG00000023102	-	81	42.063
ENSOMEG00000021420	-	67	44.366	ENSOMEG00000015103	-	88	40.157
ENSOMEG00000021420	-	60	41.818	ENSOMEG00000023774	-	59	39.894
ENSOMEG00000021420	-	84	35.741	ENSOMEG00000016853	-	66	36.655

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000021420	-	62	44.000	ENSAPOG00000005767	-	100	44.000	Acanthochromis_polyacanthus
ENSOMEG00000021420	-	67	39.896	ENSAOCG00000000570	-	63	39.896	Amphiprion_ocellaris
ENSOMEG00000021420	-	68	34.498	ENSAPEG00000018796	-	83	34.783	Amphiprion_percula
ENSOMEG00000021420	-	98	44.565	ENSCVAG00000018507	-	94	45.916	Cyprinodon_variegatus
ENSOMEG00000021420	-	72	46.076	ENSFHEG00000022534	-	85	47.312	Fundulus_heteroclitus
ENSOMEG00000021420	-	61	38.610	ENSKMAG00000013745	-	65	45.181	Kryptolebias_marmoratus
ENSOMEG00000021420	-	99	47.674	ENSMAMG00000009817	-	69	61.905	Mastacembelus_armatus
ENSOMEG00000021420	-	68	41.237	ENSMAMG00000018114	-	87	41.237	Mastacembelus_armatus
ENSOMEG00000021420	-	67	43.478	ENSMZEG00005016808	-	80	42.982	Maylandia_zebra
ENSOMEG00000021420	-	85	45.833	ENSMALG00000008930	-	82	38.996	Monopterus_albus
ENSOMEG00000021420	-	63	38.281	ENSMALG00000004579	-	97	43.094	Monopterus_albus
ENSOMEG00000021420	-	65	42.775	ENSMALG00000012116	-	99	44.253	Monopterus_albus
ENSOMEG00000021420	-	63	36.080	ENSMALG00000001085	-	92	35.694	Monopterus_albus
ENSOMEG00000021420	-	62	40.351	ENSMALG00000012757	-	70	40.351	Monopterus_albus
ENSOMEG00000021420	-	62	44.444	ENSNBRG00000013501	-	81	44.444	Neolamprologus_brichardi
ENSOMEG00000021420	-	99	42.413	ENSPREG00000014898	-	89	41.209	Poecilia_reticulata
ENSOMEG00000021420	-	66	42.614	ENSPNYG00000007756	-	78	42.614	Pundamilia_nyererei
ENSOMEG00000021420	-	99	45.091	ENSSMAG00000017494	-	68	44.685	Scophthalmus_maximus
ENSOMEG00000021420	-	62	43.333	ENSSDUG00000001263	-	99	43.333	Seriola_dumerili
ENSOMEG00000021420	-	99	45.946	ENSSDUG00000000496	-	68	46.000	Seriola_dumerili
ENSOMEG00000021420	-	68	37.619	ENSSLDG00000023661	-	87	37.619	Seriola_lalandi_dorsalis
ENSOMEG00000021420	-	78	37.209	ENSTRUG00000012273	-	77	37.209	Takifugu_rubripes
ENSOMEG00000021420	-	63	44.898	ENSTRUG00000022919	-	78	44.898	Takifugu_rubripes
ENSOMEG00000021420	-	67	44.388	ENSTRUG00000023925	-	69	43.885	Takifugu_rubripes
ENSOMEG00000021420	-	63	44.538	ENSTRUG00000022206	-	61	38.577	Takifugu_rubripes
ENSOMEG00000021420	-	67	47.059	ENSTRUG00000001268	-	97	40.181	Takifugu_rubripes
ENSOMEG00000021420	-	64	47.552	ENSTRUG00000003111	-	86	47.552	Takifugu_rubripes
ENSOMEG00000021420	-	61	45.370	ENSTNIG00000005856	-	99	45.370	Tetraodon_nigroviridis
ENSOMEG00000021420	-	65	42.473	ENSXCOG00000019492	-	99	42.473	Xiphophorus_couchianus
ENSOMEG00000021420	-	60	37.004	ENSXMAG00000022297	-	99	37.674	Xiphophorus_maculatus