EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000021426 (Gene tree)
Gene ID: 112145843
Gene Symbol: rpusd1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 4071 bases
Position: chrNVQA01000010.1:6640891-6644961
Accession: 112145843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000034674	PseudoU_synth_2	PF00849.22	1.3e-25	1	1
ENSOMEP00000019595	PseudoU_synth_2	PF00849.22	4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000028866	-	945	-	ENSOMEP00000019595	314 (aa)	-	-
ENSOMET00000035755	-	2677	-	ENSOMEP00000034674	302 (aa)	XP_024127067	UPI000CF823F0

Gene Model

Click here to download ENSOMEG00000021426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000021426's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000021426	rpusd1	98	56.721	ENSG00000007376	RPUSD1	99	68.263	Homo_sapiens
ENSOMEG00000021426	rpusd1	100	75.570	ENSAPOG00000022221	rpusd1	100	76.221	Acanthochromis_polyacanthus
ENSOMEG00000021426	rpusd1	98	58.586	ENSAMEG00000007461	RPUSD1	98	58.586	Ailuropoda_melanoleuca
ENSOMEG00000021426	rpusd1	99	76.452	ENSACIG00000015863	rpusd1	100	78.065	Amphilophus_citrinellus
ENSOMEG00000021426	rpusd1	100	75.484	ENSAOCG00000021975	rpusd1	97	76.129	Amphiprion_ocellaris
ENSOMEG00000021426	rpusd1	100	75.806	ENSAPEG00000001316	rpusd1	97	76.452	Amphiprion_percula
ENSOMEG00000021426	rpusd1	100	76.774	ENSATEG00000002984	rpusd1	100	77.097	Anabas_testudineus
ENSOMEG00000021426	rpusd1	76	58.228	ENSAPLG00000012316	RPUSD1	98	58.228	Anas_platyrhynchos
ENSOMEG00000021426	rpusd1	98	64.310	ENSACAG00000008953	RPUSD1	99	64.238	Anolis_carolinensis
ENSOMEG00000021426	rpusd1	98	57.705	ENSANAG00000024709	RPUSD1	98	57.705	Aotus_nancymaae
ENSOMEG00000021426	rpusd1	99	75.884	ENSACLG00000013692	rpusd1	100	75.884	Astatotilapia_calliptera
ENSOMEG00000021426	rpusd1	99	68.896	ENSAMXG00000019802	rpusd1	99	67.893	Astyanax_mexicanus
ENSOMEG00000021426	rpusd1	98	60.465	ENSBTAG00000000179	RPUSD1	98	60.465	Bos_taurus
ENSOMEG00000021426	rpusd1	98	57.049	ENSCJAG00000012253	RPUSD1	98	57.049	Callithrix_jacchus
ENSOMEG00000021426	rpusd1	98	58.249	ENSCAFG00000019614	RPUSD1	98	58.249	Canis_familiaris
ENSOMEG00000021426	rpusd1	98	58.249	ENSCAFG00020008891	RPUSD1	98	58.249	Canis_lupus_dingo
ENSOMEG00000021426	rpusd1	98	60.465	ENSCHIG00000012872	RPUSD1	98	60.465	Capra_hircus
ENSOMEG00000021426	rpusd1	98	57.912	ENSTSYG00000036934	RPUSD1	91	68.908	Carlito_syrichta
ENSOMEG00000021426	rpusd1	98	57.525	ENSCAPG00000014219	RPUSD1	98	57.525	Cavia_aperea
ENSOMEG00000021426	rpusd1	98	57.525	ENSCPOG00000034604	RPUSD1	98	57.525	Cavia_porcellus
ENSOMEG00000021426	rpusd1	98	57.705	ENSCCAG00000034385	RPUSD1	98	57.705	Cebus_capucinus
ENSOMEG00000021426	rpusd1	98	56.721	ENSCATG00000042983	RPUSD1	94	66.129	Cercocebus_atys
ENSOMEG00000021426	rpusd1	98	57.525	ENSCLAG00000013966	RPUSD1	98	57.525	Chinchilla_lanigera
ENSOMEG00000021426	rpusd1	98	56.393	ENSCSAG00000012121	RPUSD1	98	56.393	Chlorocebus_sabaeus
ENSOMEG00000021426	rpusd1	98	62.000	ENSCPBG00000021101	RPUSD1	99	62.000	Chrysemys_picta_bellii
ENSOMEG00000021426	rpusd1	83	64.032	ENSCANG00000028576	RPUSD1	94	66.129	Colobus_angolensis_palliatus
ENSOMEG00000021426	rpusd1	98	58.863	ENSCGRG00001014253	Rpusd1	98	58.528	Cricetulus_griseus_chok1gshd
ENSOMEG00000021426	rpusd1	98	58.863	ENSCGRG00000017995	Rpusd1	98	58.528	Cricetulus_griseus_crigri
ENSOMEG00000021426	rpusd1	99	75.168	ENSCSEG00000018512	rpusd1	99	75.168	Cynoglossus_semilaevis
ENSOMEG00000021426	rpusd1	99	77.632	ENSCVAG00000022746	rpusd1	100	77.632	Cyprinodon_variegatus
ENSOMEG00000021426	rpusd1	98	70.946	ENSDARG00000060192	rpusd1	99	70.946	Danio_rerio
ENSOMEG00000021426	rpusd1	98	56.478	ENSDNOG00000003721	RPUSD1	98	56.478	Dasypus_novemcinctus
ENSOMEG00000021426	rpusd1	98	57.912	ENSDORG00000026656	Rpusd1	98	57.912	Dipodomys_ordii
ENSOMEG00000021426	rpusd1	96	48.852	ENSEBUG00000008767	rpusd1	92	48.852	Eptatretus_burgeri
ENSOMEG00000021426	rpusd1	98	56.958	ENSEASG00005018421	RPUSD1	74	57.282	Equus_asinus_asinus
ENSOMEG00000021426	rpusd1	99	68.404	ENSELUG00000014307	rpusd1	89	68.197	Esox_lucius
ENSOMEG00000021426	rpusd1	98	57.912	ENSFCAG00000010359	RPUSD1	98	60.000	Felis_catus
ENSOMEG00000021426	rpusd1	98	65.436	ENSFALG00000003211	RPUSD1	99	65.436	Ficedula_albicollis
ENSOMEG00000021426	rpusd1	98	58.528	ENSFDAG00000013398	RPUSD1	98	58.528	Fukomys_damarensis
ENSOMEG00000021426	rpusd1	99	75.896	ENSFHEG00000004736	rpusd1	100	76.873	Fundulus_heteroclitus
ENSOMEG00000021426	rpusd1	99	71.242	ENSGMOG00000010756	rpusd1	99	71.661	Gadus_morhua
ENSOMEG00000021426	rpusd1	98	63.455	ENSGALG00000005315	RPUSD1	99	63.123	Gallus_gallus
ENSOMEG00000021426	rpusd1	99	77.303	ENSGAFG00000009886	rpusd1	100	77.632	Gambusia_affinis
ENSOMEG00000021426	rpusd1	99	73.139	ENSGACG00000014276	rpusd1	100	75.081	Gasterosteus_aculeatus
ENSOMEG00000021426	rpusd1	98	61.667	ENSGAGG00000004181	RPUSD1	99	61.667	Gopherus_agassizii
ENSOMEG00000021426	rpusd1	98	57.516	ENSGGOG00000013997	RPUSD1	94	66.935	Gorilla_gorilla
ENSOMEG00000021426	rpusd1	99	76.206	ENSHBUG00000023728	rpusd1	100	76.206	Haplochromis_burtoni
ENSOMEG00000021426	rpusd1	98	57.525	ENSHGLG00000002595	RPUSD1	98	57.525	Heterocephalus_glaber_female
ENSOMEG00000021426	rpusd1	98	57.525	ENSHGLG00100014303	RPUSD1	98	57.525	Heterocephalus_glaber_male
ENSOMEG00000021426	rpusd1	99	72.607	ENSHCOG00000002390	rpusd1	99	72.054	Hippocampus_comes
ENSOMEG00000021426	rpusd1	98	66.779	ENSIPUG00000001570	rpusd1	98	67.000	Ictalurus_punctatus
ENSOMEG00000021426	rpusd1	98	58.528	ENSSTOG00000004276	RPUSD1	98	58.528	Ictidomys_tridecemlineatus
ENSOMEG00000021426	rpusd1	98	57.576	ENSJJAG00000015696	Rpusd1	98	57.576	Jaculus_jaculus
ENSOMEG00000021426	rpusd1	100	76.721	ENSKMAG00000017287	rpusd1	100	78.033	Kryptolebias_marmoratus
ENSOMEG00000021426	rpusd1	100	75.484	ENSLBEG00000013354	RPUSD1	100	75.161	Labrus_bergylta
ENSOMEG00000021426	rpusd1	100	75.484	ENSLBEG00000022502	rpusd1	100	75.161	Labrus_bergylta
ENSOMEG00000021426	rpusd1	98	63.366	ENSLACG00000008869	RPUSD1	99	63.758	Latimeria_chalumnae
ENSOMEG00000021426	rpusd1	71	78.972	ENSLOCG00000005682	rpusd1	99	78.972	Lepisosteus_oculatus
ENSOMEG00000021426	rpusd1	98	56.902	ENSLAFG00000002115	RPUSD1	98	56.902	Loxodonta_africana
ENSOMEG00000021426	rpusd1	98	56.721	ENSMFAG00000003961	RPUSD1	94	66.129	Macaca_fascicularis
ENSOMEG00000021426	rpusd1	98	56.721	ENSMMUG00000000842	RPUSD1	94	66.129	Macaca_mulatta
ENSOMEG00000021426	rpusd1	98	56.721	ENSMNEG00000042712	RPUSD1	94	66.129	Macaca_nemestrina
ENSOMEG00000021426	rpusd1	98	56.721	ENSMLEG00000030591	RPUSD1	94	66.129	Mandrillus_leucophaeus
ENSOMEG00000021426	rpusd1	100	78.457	ENSMAMG00000004735	rpusd1	100	78.457	Mastacembelus_armatus
ENSOMEG00000021426	rpusd1	99	75.884	ENSMZEG00005003214	rpusd1	100	75.884	Maylandia_zebra
ENSOMEG00000021426	rpusd1	96	64.407	ENSMGAG00000005447	RPUSD1	98	64.189	Meleagris_gallopavo
ENSOMEG00000021426	rpusd1	83	55.731	ENSMAUG00000019998	Rpusd1	96	55.731	Mesocricetus_auratus
ENSOMEG00000021426	rpusd1	98	57.667	ENSMICG00000017561	RPUSD1	94	66.129	Microcebus_murinus
ENSOMEG00000021426	rpusd1	98	57.807	ENSMOCG00000014082	Rpusd1	98	58.528	Microtus_ochrogaster
ENSOMEG00000021426	rpusd1	99	72.039	ENSMMOG00000012569	rpusd1	99	72.368	Mola_mola
ENSOMEG00000021426	rpusd1	99	60.191	ENSMODG00000016882	RPUSD1	99	60.191	Monodelphis_domestica
ENSOMEG00000021426	rpusd1	100	76.849	ENSMALG00000017818	rpusd1	100	76.206	Monopterus_albus
ENSOMEG00000021426	rpusd1	98	57.143	MGP_CAROLIEiJ_G0021244	Rpusd1	98	57.143	Mus_caroli
ENSOMEG00000021426	rpusd1	98	57.860	ENSMUSG00000041199	Rpusd1	98	57.860	Mus_musculus
ENSOMEG00000021426	rpusd1	98	57.143	MGP_PahariEiJ_G0023562	Rpusd1	98	57.143	Mus_pahari
ENSOMEG00000021426	rpusd1	98	57.860	MGP_SPRETEiJ_G0022155	Rpusd1	98	57.860	Mus_spretus
ENSOMEG00000021426	rpusd1	96	56.849	ENSMPUG00000015897	RPUSD1	96	56.655	Mustela_putorius_furo
ENSOMEG00000021426	rpusd1	98	57.895	ENSMLUG00000001089	RPUSD1	81	64.822	Myotis_lucifugus
ENSOMEG00000021426	rpusd1	98	57.191	ENSNGAG00000003595	Rpusd1	98	57.191	Nannospalax_galili
ENSOMEG00000021426	rpusd1	99	77.409	ENSNBRG00000006457	rpusd1	100	77.409	Neolamprologus_brichardi
ENSOMEG00000021426	rpusd1	53	49.112	ENSNLEG00000008424	-	97	49.112	Nomascus_leucogenys
ENSOMEG00000021426	rpusd1	98	62.081	ENSMEUG00000016049	RPUSD1	98	62.081	Notamacropus_eugenii
ENSOMEG00000021426	rpusd1	98	52.525	ENSOPRG00000008340	RPUSD1	98	52.525	Ochotona_princeps
ENSOMEG00000021426	rpusd1	98	57.191	ENSODEG00000016945	RPUSD1	98	56.536	Octodon_degus
ENSOMEG00000021426	rpusd1	99	75.974	ENSONIG00000015672	rpusd1	100	75.649	Oreochromis_niloticus
ENSOMEG00000021426	rpusd1	100	89.145	ENSORLG00000013009	rpusd1	100	89.145	Oryzias_latipes
ENSOMEG00000021426	rpusd1	100	88.816	ENSORLG00020010382	rpusd1	100	88.816	Oryzias_latipes_hni
ENSOMEG00000021426	rpusd1	100	88.158	ENSORLG00015021354	rpusd1	100	88.158	Oryzias_latipes_hsok
ENSOMEG00000021426	rpusd1	98	56.721	ENSOGAG00000003795	RPUSD1	98	56.721	Otolemur_garnettii
ENSOMEG00000021426	rpusd1	98	60.465	ENSOARG00000014254	RPUSD1	98	61.130	Ovis_aries
ENSOMEG00000021426	rpusd1	98	57.049	ENSPPAG00000034797	RPUSD1	93	67.480	Pan_paniscus
ENSOMEG00000021426	rpusd1	98	58.389	ENSPPRG00000012389	RPUSD1	98	60.000	Panthera_pardus
ENSOMEG00000021426	rpusd1	98	58.000	ENSPTIG00000008545	RPUSD1	98	60.000	Panthera_tigris_altaica
ENSOMEG00000021426	rpusd1	98	57.049	ENSPTRG00000007565	RPUSD1	93	67.480	Pan_troglodytes
ENSOMEG00000021426	rpusd1	98	56.721	ENSPANG00000024401	RPUSD1	94	66.129	Papio_anubis
ENSOMEG00000021426	rpusd1	99	68.750	ENSPKIG00000018890	rpusd1	91	68.750	Paramormyrops_kingsleyae
ENSOMEG00000021426	rpusd1	98	64.333	ENSPSIG00000013945	RPUSD1	99	64.333	Pelodiscus_sinensis
ENSOMEG00000021426	rpusd1	99	70.432	ENSPMGG00000014950	rpusd1	99	70.395	Periophthalmus_magnuspinnatus
ENSOMEG00000021426	rpusd1	98	57.525	ENSPEMG00000000497	Rpusd1	98	57.525	Peromyscus_maniculatus_bairdii
ENSOMEG00000021426	rpusd1	99	52.303	ENSPMAG00000001563	rpusd1	99	52.131	Petromyzon_marinus
ENSOMEG00000021426	rpusd1	99	63.816	ENSPCIG00000021216	-	93	60.952	Phascolarctos_cinereus
ENSOMEG00000021426	rpusd1	99	77.888	ENSPFOG00000007946	rpusd1	100	77.888	Poecilia_formosa
ENSOMEG00000021426	rpusd1	99	77.888	ENSPLAG00000011925	rpusd1	100	77.888	Poecilia_latipinna
ENSOMEG00000021426	rpusd1	99	77.888	ENSPMEG00000002910	rpusd1	100	77.888	Poecilia_mexicana
ENSOMEG00000021426	rpusd1	99	78.618	ENSPREG00000019851	rpusd1	100	78.618	Poecilia_reticulata
ENSOMEG00000021426	rpusd1	98	45.455	ENSPCAG00000002258	RPUSD1	98	45.455	Procavia_capensis
ENSOMEG00000021426	rpusd1	98	55.738	ENSPCOG00000022582	RPUSD1	98	56.066	Propithecus_coquereli
ENSOMEG00000021426	rpusd1	98	53.443	ENSPVAG00000013104	RPUSD1	98	54.098	Pteropus_vampyrus
ENSOMEG00000021426	rpusd1	99	76.744	ENSPNYG00000024076	rpusd1	100	76.412	Pundamilia_nyererei
ENSOMEG00000021426	rpusd1	99	65.217	ENSPNAG00000013806	rpusd1	99	65.217	Pygocentrus_nattereri
ENSOMEG00000021426	rpusd1	98	57.860	ENSRNOG00000023639	Rpusd1	98	57.860	Rattus_norvegicus
ENSOMEG00000021426	rpusd1	98	57.377	ENSRBIG00000030238	RPUSD1	94	66.129	Rhinopithecus_bieti
ENSOMEG00000021426	rpusd1	98	57.377	ENSRROG00000036663	RPUSD1	94	66.129	Rhinopithecus_roxellana
ENSOMEG00000021426	rpusd1	98	58.249	ENSSBOG00000033063	RPUSD1	98	58.586	Saimiri_boliviensis_boliviensis
ENSOMEG00000021426	rpusd1	98	61.616	ENSSHAG00000013500	RPUSD1	98	60.841	Sarcophilus_harrisii
ENSOMEG00000021426	rpusd1	98	69.536	ENSSFOG00015014394	rpusd1	99	69.536	Scleropages_formosus
ENSOMEG00000021426	rpusd1	99	76.375	ENSSMAG00000008045	rpusd1	93	75.728	Scophthalmus_maximus
ENSOMEG00000021426	rpusd1	100	76.774	ENSSDUG00000001829	rpusd1	97	77.097	Seriola_dumerili
ENSOMEG00000021426	rpusd1	100	76.774	ENSSLDG00000020853	rpusd1	97	77.097	Seriola_lalandi_dorsalis
ENSOMEG00000021426	rpusd1	55	71.856	ENSSARG00000011187	-	100	71.856	Sorex_araneus
ENSOMEG00000021426	rpusd1	61	55.959	ENSSPUG00000005119	-	98	54.124	Sphenodon_punctatus
ENSOMEG00000021426	rpusd1	100	79.032	ENSSPAG00000012708	rpusd1	100	78.710	Stegastes_partitus
ENSOMEG00000021426	rpusd1	98	58.689	ENSSSCG00000008000	RPUSD1	98	65.354	Sus_scrofa
ENSOMEG00000021426	rpusd1	83	68.526	ENSTGUG00000015375	RPUSD1	99	68.526	Taeniopygia_guttata
ENSOMEG00000021426	rpusd1	100	74.194	ENSTRUG00000003041	rpusd1	99	74.194	Takifugu_rubripes
ENSOMEG00000021426	rpusd1	99	71.477	ENSTNIG00000002660	rpusd1	99	71.477	Tetraodon_nigroviridis
ENSOMEG00000021426	rpusd1	98	58.361	ENSTTRG00000010167	RPUSD1	98	56.604	Tursiops_truncatus
ENSOMEG00000021426	rpusd1	98	58.249	ENSUAMG00000012736	RPUSD1	98	58.140	Ursus_americanus
ENSOMEG00000021426	rpusd1	98	58.249	ENSUMAG00000021174	RPUSD1	98	58.249	Ursus_maritimus
ENSOMEG00000021426	rpusd1	98	58.249	ENSVVUG00000012357	RPUSD1	98	58.249	Vulpes_vulpes
ENSOMEG00000021426	rpusd1	98	63.423	ENSXETG00000007184	rpusd1	98	63.423	Xenopus_tropicalis
ENSOMEG00000021426	rpusd1	99	77.961	ENSXCOG00000017930	rpusd1	100	77.961	Xiphophorus_couchianus
ENSOMEG00000021426	rpusd1	99	78.618	ENSXMAG00000024084	rpusd1	100	78.618	Xiphophorus_maculatus