EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000021513 (Gene tree)
Gene ID: 112140931
Gene Symbol: rif1
Alias: -
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 35501 bases
Position: chrNVQA01005860.1:54185-89685
Accession: 112140931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000034747	Rif1_N	PF12231.8	8.6e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000028997	-	7346	XM_024263953	ENSOMEP00000034747	2264 (aa)	XP_024119721	UPI000CF81A9A

Gene Model

Click here to download ENSOMEG00000021513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000021513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000021513	rif1	68	48.603	ENSG00000080345	RIF1	97	51.986	Homo_sapiens
ENSOMEG00000021513	rif1	99	66.808	ENSAPOG00000011073	rif1	99	64.854	Acanthochromis_polyacanthus
ENSOMEG00000021513	rif1	66	49.042	ENSAMEG00000008461	RIF1	62	49.035	Ailuropoda_melanoleuca
ENSOMEG00000021513	rif1	57	69.306	ENSACIG00000017765	rif1	63	65.747	Amphilophus_citrinellus
ENSOMEG00000021513	rif1	63	66.010	ENSAOCG00000017231	rif1	89	66.054	Amphiprion_ocellaris
ENSOMEG00000021513	rif1	62	72.462	ENSAPEG00000013228	rif1	62	72.462	Amphiprion_percula
ENSOMEG00000021513	rif1	99	54.520	ENSATEG00000022887	rif1	99	54.722	Anabas_testudineus
ENSOMEG00000021513	rif1	51	50.534	ENSAPLG00000007092	RIF1	53	51.322	Anas_platyrhynchos
ENSOMEG00000021513	rif1	68	47.578	ENSACAG00000003714	RIF1	64	47.932	Anolis_carolinensis
ENSOMEG00000021513	rif1	68	48.300	ENSANAG00000024840	RIF1	63	48.290	Aotus_nancymaae
ENSOMEG00000021513	rif1	72	60.938	ENSAMXG00000010910	rif1	70	60.938	Astyanax_mexicanus
ENSOMEG00000021513	rif1	60	48.571	ENSBTAG00000021020	RIF1	60	49.453	Bos_taurus
ENSOMEG00000021513	rif1	68	48.749	ENSCJAG00000003138	RIF1	64	48.945	Callithrix_jacchus
ENSOMEG00000021513	rif1	53	49.285	ENSCAFG00000005670	RIF1	60	49.280	Canis_familiaris
ENSOMEG00000021513	rif1	67	49.285	ENSCAFG00020016401	RIF1	63	49.280	Canis_lupus_dingo
ENSOMEG00000021513	rif1	68	47.969	ENSCHIG00000020327	RIF1	63	47.956	Capra_hircus
ENSOMEG00000021513	rif1	68	46.810	ENSTSYG00000008861	RIF1	62	46.989	Carlito_syrichta
ENSOMEG00000021513	rif1	56	40.000	ENSCAPG00000008957	RIF1	63	40.190	Cavia_aperea
ENSOMEG00000021513	rif1	66	45.955	ENSCPOG00000037898	RIF1	62	46.290	Cavia_porcellus
ENSOMEG00000021513	rif1	68	46.534	ENSCCAG00000024760	RIF1	63	46.704	Cebus_capucinus
ENSOMEG00000021513	rif1	67	48.852	ENSCATG00000033353	RIF1	62	49.123	Cercocebus_atys
ENSOMEG00000021513	rif1	65	48.312	ENSCLAG00000001517	RIF1	63	48.158	Chinchilla_lanigera
ENSOMEG00000021513	rif1	67	48.972	ENSCSAG00000016089	RIF1	62	49.282	Chlorocebus_sabaeus
ENSOMEG00000021513	rif1	65	45.957	ENSCHOG00000007187	RIF1	60	45.957	Choloepus_hoffmanni
ENSOMEG00000021513	rif1	69	51.127	ENSCPBG00000025885	RIF1	70	51.307	Chrysemys_picta_bellii
ENSOMEG00000021513	rif1	61	57.073	ENSCANG00000028962	RIF1	61	57.073	Colobus_angolensis_palliatus
ENSOMEG00000021513	rif1	67	46.468	ENSCGRG00001024589	Rif1	63	47.180	Cricetulus_griseus_chok1gshd
ENSOMEG00000021513	rif1	65	47.816	ENSCGRG00000010713	Rif1	63	48.567	Cricetulus_griseus_crigri
ENSOMEG00000021513	rif1	76	54.935	ENSCSEG00000003945	rif1	81	70.040	Cynoglossus_semilaevis
ENSOMEG00000021513	rif1	58	55.927	ENSDARG00000062650	rif1	58	55.675	Danio_rerio
ENSOMEG00000021513	rif1	85	45.394	ENSDNOG00000011194	RIF1	62	47.419	Dasypus_novemcinctus
ENSOMEG00000021513	rif1	67	44.797	ENSETEG00000012421	RIF1	62	44.684	Echinops_telfairi
ENSOMEG00000021513	rif1	61	63.844	ENSEASG00005023434	RIF1	57	63.844	Equus_asinus_asinus
ENSOMEG00000021513	rif1	63	56.185	ENSECAG00000012679	RIF1	60	56.185	Equus_caballus
ENSOMEG00000021513	rif1	70	62.121	ENSELUG00000006826	rif1	62	62.121	Esox_lucius
ENSOMEG00000021513	rif1	67	47.908	ENSFCAG00000029742	RIF1	61	48.996	Felis_catus
ENSOMEG00000021513	rif1	61	51.048	ENSFALG00000013874	RIF1	50	52.376	Ficedula_albicollis
ENSOMEG00000021513	rif1	66	47.910	ENSFDAG00000006538	RIF1	62	48.032	Fukomys_damarensis
ENSOMEG00000021513	rif1	99	55.722	ENSFHEG00000013721	rif1	99	55.546	Fundulus_heteroclitus
ENSOMEG00000021513	rif1	69	68.103	ENSGMOG00000003517	rif1	99	68.103	Gadus_morhua
ENSOMEG00000021513	rif1	96	72.747	ENSGAFG00000017196	rif1	99	72.747	Gambusia_affinis
ENSOMEG00000021513	rif1	69	50.485	ENSGAGG00000012595	RIF1	68	50.739	Gopherus_agassizii
ENSOMEG00000021513	rif1	57	55.143	ENSGGOG00000040178	RIF1	57	54.698	Gorilla_gorilla
ENSOMEG00000021513	rif1	99	57.255	ENSHBUG00000007125	rif1	99	58.409	Haplochromis_burtoni
ENSOMEG00000021513	rif1	60	51.111	ENSHGLG00100009807	RIF1	60	51.111	Heterocephalus_glaber_male
ENSOMEG00000021513	rif1	77	63.557	ENSHCOG00000015943	rif1	68	63.557	Hippocampus_comes
ENSOMEG00000021513	rif1	67	62.377	ENSIPUG00000021703	rif1	63	62.337	Ictalurus_punctatus
ENSOMEG00000021513	rif1	81	48.311	ENSSTOG00000020712	RIF1	71	48.923	Ictidomys_tridecemlineatus
ENSOMEG00000021513	rif1	67	46.965	ENSJJAG00000023000	Rif1	64	46.945	Jaculus_jaculus
ENSOMEG00000021513	rif1	99	55.152	ENSKMAG00000002852	rif1	99	55.583	Kryptolebias_marmoratus
ENSOMEG00000021513	rif1	91	64.990	ENSLBEG00000023196	rif1	83	64.710	Labrus_bergylta
ENSOMEG00000021513	rif1	55	55.959	ENSLOCG00000002657	rif1	80	55.587	Lepisosteus_oculatus
ENSOMEG00000021513	rif1	67	49.398	ENSLAFG00000009796	RIF1	62	49.394	Loxodonta_africana
ENSOMEG00000021513	rif1	67	49.010	ENSMFAG00000032233	RIF1	62	49.282	Macaca_fascicularis
ENSOMEG00000021513	rif1	67	49.010	ENSMMUG00000008611	RIF1	62	49.282	Macaca_mulatta
ENSOMEG00000021513	rif1	67	49.012	ENSMNEG00000031616	RIF1	62	49.283	Macaca_nemestrina
ENSOMEG00000021513	rif1	67	48.852	ENSMLEG00000042945	RIF1	62	49.123	Mandrillus_leucophaeus
ENSOMEG00000021513	rif1	77	65.517	ENSMAMG00000001745	rif1	82	62.706	Mastacembelus_armatus
ENSOMEG00000021513	rif1	99	51.358	ENSMZEG00005020920	rif1	99	70.638	Maylandia_zebra
ENSOMEG00000021513	rif1	52	51.365	ENSMGAG00000012732	RIF1	53	51.462	Meleagris_gallopavo
ENSOMEG00000021513	rif1	61	60.606	ENSMAUG00000013158	Rif1	61	60.606	Mesocricetus_auratus
ENSOMEG00000021513	rif1	66	48.924	ENSMICG00000046127	RIF1	61	49.278	Microcebus_murinus
ENSOMEG00000021513	rif1	67	46.417	ENSMOCG00000009381	Rif1	63	46.737	Microtus_ochrogaster
ENSOMEG00000021513	rif1	69	48.407	ENSMODG00000003703	RIF1	64	49.392	Monodelphis_domestica
ENSOMEG00000021513	rif1	79	67.802	ENSMALG00000016759	rif1	99	59.091	Monopterus_albus
ENSOMEG00000021513	rif1	68	48.629	MGP_CAROLIEiJ_G0023555	Rif1	64	48.701	Mus_caroli
ENSOMEG00000021513	rif1	68	47.857	ENSMUSG00000036202	Rif1	64	48.010	Mus_musculus
ENSOMEG00000021513	rif1	63	48.644	MGP_PahariEiJ_G0025006	Rif1	63	46.235	Mus_pahari
ENSOMEG00000021513	rif1	68	48.636	MGP_SPRETEiJ_G0024476	Rif1	64	49.154	Mus_spretus
ENSOMEG00000021513	rif1	67	49.043	ENSMPUG00000000371	RIF1	62	49.157	Mustela_putorius_furo
ENSOMEG00000021513	rif1	57	46.076	ENSMLUG00000003376	RIF1	60	46.045	Myotis_lucifugus
ENSOMEG00000021513	rif1	67	48.186	ENSNGAG00000009268	Rif1	65	48.841	Nannospalax_galili
ENSOMEG00000021513	rif1	99	53.624	ENSNBRG00000014257	rif1	99	53.769	Neolamprologus_brichardi
ENSOMEG00000021513	rif1	66	48.022	ENSNLEG00000010955	RIF1	62	48.183	Nomascus_leucogenys
ENSOMEG00000021513	rif1	67	45.187	ENSODEG00000003950	RIF1	62	45.712	Octodon_degus
ENSOMEG00000021513	rif1	99	57.857	ENSONIG00000013657	rif1	100	58.257	Oreochromis_niloticus
ENSOMEG00000021513	rif1	58	53.321	ENSOANG00000006078	-	55	53.226	Ornithorhynchus_anatinus
ENSOMEG00000021513	rif1	68	46.948	ENSOCUG00000017435	RIF1	62	48.500	Oryctolagus_cuniculus
ENSOMEG00000021513	rif1	100	76.305	ENSORLG00020001302	rif1	100	76.133	Oryzias_latipes_hni
ENSOMEG00000021513	rif1	100	76.752	ENSORLG00015000009	rif1	100	76.581	Oryzias_latipes_hsok
ENSOMEG00000021513	rif1	67	49.639	ENSOGAG00000006141	RIF1	62	49.555	Otolemur_garnettii
ENSOMEG00000021513	rif1	70	47.750	ENSOARG00000008930	RIF1	63	49.157	Ovis_aries
ENSOMEG00000021513	rif1	74	47.788	ENSPPAG00000023754	RIF1	68	48.765	Pan_paniscus
ENSOMEG00000021513	rif1	67	48.685	ENSPPRG00000003618	RIF1	61	49.157	Panthera_pardus
ENSOMEG00000021513	rif1	67	48.685	ENSPTIG00000020652	RIF1	61	49.157	Panthera_tigris_altaica
ENSOMEG00000021513	rif1	74	47.867	ENSPTRG00000012534	RIF1	68	48.845	Pan_troglodytes
ENSOMEG00000021513	rif1	67	48.852	ENSPANG00000008525	RIF1	62	49.123	Papio_anubis
ENSOMEG00000021513	rif1	76	65.217	ENSPMGG00000016141	rif1	86	65.217	Periophthalmus_magnuspinnatus
ENSOMEG00000021513	rif1	66	48.653	ENSPEMG00000000446	Rif1	63	49.143	Peromyscus_maniculatus_bairdii
ENSOMEG00000021513	rif1	69	48.424	ENSPCIG00000009185	RIF1	64	49.239	Phascolarctos_cinereus
ENSOMEG00000021513	rif1	92	55.288	ENSPFOG00000000554	-	99	55.747	Poecilia_formosa
ENSOMEG00000021513	rif1	63	66.508	ENSPFOG00000017804	rif1	99	56.838	Poecilia_formosa
ENSOMEG00000021513	rif1	91	61.494	ENSPLAG00000017945	rif1	99	55.336	Poecilia_latipinna
ENSOMEG00000021513	rif1	83	70.921	ENSPREG00000018052	rif1	99	56.092	Poecilia_reticulata
ENSOMEG00000021513	rif1	68	48.923	ENSPPYG00000012846	RIF1	63	49.084	Pongo_abelii
ENSOMEG00000021513	rif1	79	48.295	ENSPCOG00000027888	RIF1	70	49.032	Propithecus_coquereli
ENSOMEG00000021513	rif1	58	56.998	ENSPVAG00000014276	RIF1	56	56.998	Pteropus_vampyrus
ENSOMEG00000021513	rif1	99	52.629	ENSPNYG00000012940	rif1	99	70.732	Pundamilia_nyererei
ENSOMEG00000021513	rif1	62	49.818	ENSRNOG00000054901	Rif1	64	46.123	Rattus_norvegicus
ENSOMEG00000021513	rif1	66	48.516	ENSRBIG00000003704	RIF1	62	48.320	Rhinopithecus_bieti
ENSOMEG00000021513	rif1	66	49.120	ENSRROG00000028206	RIF1	62	49.043	Rhinopithecus_roxellana
ENSOMEG00000021513	rif1	69	50.549	ENSSBOG00000029530	RIF1	64	50.549	Saimiri_boliviensis_boliviensis
ENSOMEG00000021513	rif1	69	48.445	ENSSHAG00000018552	RIF1	63	49.312	Sarcophilus_harrisii
ENSOMEG00000021513	rif1	79	70.588	ENSSMAG00000011704	rif1	93	70.588	Scophthalmus_maximus
ENSOMEG00000021513	rif1	60	68.275	ENSSDUG00000015632	rif1	62	67.483	Seriola_dumerili
ENSOMEG00000021513	rif1	66	49.873	ENSSPUG00000003062	RIF1	65	50.338	Sphenodon_punctatus
ENSOMEG00000021513	rif1	65	68.472	ENSSPAG00000018359	rif1	94	68.472	Stegastes_partitus
ENSOMEG00000021513	rif1	67	49.281	ENSSSCG00000016395	RIF1	62	49.436	Sus_scrofa
ENSOMEG00000021513	rif1	88	61.803	ENSTRUG00000015808	rif1	92	61.389	Takifugu_rubripes
ENSOMEG00000021513	rif1	58	51.210	ENSTBEG00000016082	RIF1	53	51.210	Tupaia_belangeri
ENSOMEG00000021513	rif1	67	49.236	ENSTTRG00000011190	RIF1	62	49.231	Tursiops_truncatus
ENSOMEG00000021513	rif1	56	47.198	ENSUAMG00000026385	RIF1	57	47.321	Ursus_americanus
ENSOMEG00000021513	rif1	66	48.724	ENSUMAG00000000337	RIF1	61	48.716	Ursus_maritimus
ENSOMEG00000021513	rif1	67	47.653	ENSVPAG00000002162	RIF1	61	47.631	Vicugna_pacos
ENSOMEG00000021513	rif1	67	49.200	ENSVVUG00000011293	RIF1	62	49.356	Vulpes_vulpes
ENSOMEG00000021513	rif1	69	47.027	ENSXETG00000004530	rif1	65	48.361	Xenopus_tropicalis
ENSOMEG00000021513	rif1	99	51.217	ENSXMAG00000000506	rif1	99	51.590	Xiphophorus_maculatus