EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000021560 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3090 bases
Position: chrNVQA01000002.1:4610497-4613586
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000019762	RVT_1	PF00078.27	5.8e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000029071	-	3090	-	ENSOMEP00000019762	1029 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000021560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000021560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000021560	-	97	31.984	ENSOMEG00000007552	-	79	32.083
ENSOMEG00000021560	-	61	30.332	ENSOMEG00000021029	-	57	30.332
ENSOMEG00000021560	-	92	36.316	ENSOMEG00000010354	-	98	36.316
ENSOMEG00000021560	-	97	38.081	ENSOMEG00000023189	-	87	38.081
ENSOMEG00000021560	-	60	33.920	ENSOMEG00000002370	-	70	33.548
ENSOMEG00000021560	-	91	36.528	ENSOMEG00000001546	-	96	36.528
ENSOMEG00000021560	-	76	33.913	ENSOMEG00000006131	-	99	33.913

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000021560	-	99	35.323	ENSAOCG00000008973	-	70	35.323	Amphiprion_ocellaris
ENSOMEG00000021560	-	97	34.277	ENSAPEG00000012642	-	80	34.277	Amphiprion_percula
ENSOMEG00000021560	-	98	31.721	ENSACLG00000023850	-	80	31.721	Astatotilapia_calliptera
ENSOMEG00000021560	-	99	35.631	ENSACLG00000002748	-	86	35.694	Astatotilapia_calliptera
ENSOMEG00000021560	-	98	44.004	ENSACLG00000014673	-	79	44.103	Astatotilapia_calliptera
ENSOMEG00000021560	-	80	33.654	ENSACLG00000027045	-	98	33.654	Astatotilapia_calliptera
ENSOMEG00000021560	-	87	37.029	ENSACLG00000018177	-	79	37.029	Astatotilapia_calliptera
ENSOMEG00000021560	-	75	33.938	ENSACLG00000026023	-	71	33.938	Astatotilapia_calliptera
ENSOMEG00000021560	-	97	32.083	ENSACLG00000012298	-	80	32.083	Astatotilapia_calliptera
ENSOMEG00000021560	-	98	37.095	ENSAMXG00000042761	-	80	37.095	Astyanax_mexicanus
ENSOMEG00000021560	-	79	48.030	ENSAMXG00000036752	-	99	48.030	Astyanax_mexicanus
ENSOMEG00000021560	-	98	31.226	ENSAMXG00000031230	-	80	31.226	Astyanax_mexicanus
ENSOMEG00000021560	-	94	31.521	ENSAMXG00000037218	-	97	31.521	Astyanax_mexicanus
ENSOMEG00000021560	-	97	31.501	ENSAMXG00000034221	-	79	31.501	Astyanax_mexicanus
ENSOMEG00000021560	-	80	32.688	ENSAMXG00000033587	-	99	32.688	Astyanax_mexicanus
ENSOMEG00000021560	-	99	45.243	ENSKMAG00000007098	-	81	45.243	Kryptolebias_marmoratus
ENSOMEG00000021560	-	98	30.371	ENSKMAG00000014428	-	80	30.371	Kryptolebias_marmoratus
ENSOMEG00000021560	-	97	31.487	ENSKMAG00000020345	-	80	31.471	Kryptolebias_marmoratus
ENSOMEG00000021560	-	95	43.922	ENSKMAG00000002601	-	79	43.922	Kryptolebias_marmoratus
ENSOMEG00000021560	-	98	43.688	ENSKMAG00000013004	-	79	43.688	Kryptolebias_marmoratus
ENSOMEG00000021560	-	95	43.590	ENSKMAG00000006893	-	98	43.590	Kryptolebias_marmoratus
ENSOMEG00000021560	-	98	31.496	ENSKMAG00000018279	-	80	31.496	Kryptolebias_marmoratus
ENSOMEG00000021560	-	98	32.417	ENSKMAG00000006598	-	87	32.613	Kryptolebias_marmoratus
ENSOMEG00000021560	-	74	37.869	ENSLBEG00000017877	-	97	37.869	Labrus_bergylta
ENSOMEG00000021560	-	97	30.957	ENSMZEG00005001544	-	99	30.957	Maylandia_zebra
ENSOMEG00000021560	-	72	48.529	ENSMZEG00005013632	-	99	48.529	Maylandia_zebra
ENSOMEG00000021560	-	63	34.128	ENSONIG00000020880	-	98	34.128	Oreochromis_niloticus
ENSOMEG00000021560	-	87	31.665	ENSONIG00000020778	-	99	31.665	Oreochromis_niloticus
ENSOMEG00000021560	-	97	34.151	ENSORLG00000029798	-	80	34.151	Oryzias_latipes
ENSOMEG00000021560	-	76	38.228	ENSORLG00000023193	-	93	38.276	Oryzias_latipes
ENSOMEG00000021560	-	97	34.347	ENSORLG00000025420	-	80	34.347	Oryzias_latipes
ENSOMEG00000021560	-	97	34.347	ENSORLG00000026691	-	80	34.347	Oryzias_latipes
ENSOMEG00000021560	-	98	30.542	ENSORLG00000029419	-	80	30.542	Oryzias_latipes
ENSOMEG00000021560	-	98	39.742	ENSORLG00020001169	-	79	39.742	Oryzias_latipes_hni
ENSOMEG00000021560	-	98	45.780	ENSORLG00020008142	-	79	45.780	Oryzias_latipes_hni
ENSOMEG00000021560	-	74	32.863	ENSORLG00020003581	-	94	32.734	Oryzias_latipes_hni
ENSOMEG00000021560	-	97	34.151	ENSORLG00020020951	-	80	34.151	Oryzias_latipes_hni
ENSOMEG00000021560	-	86	30.795	ENSORLG00020016539	-	99	30.795	Oryzias_latipes_hni
ENSOMEG00000021560	-	99	44.922	ENSORLG00015002129	-	80	44.922	Oryzias_latipes_hsok
ENSOMEG00000021560	-	65	39.521	ENSPFOG00000021895	-	68	39.521	Poecilia_formosa
ENSOMEG00000021560	-	98	32.515	ENSPREG00000018911	-	79	32.515	Poecilia_reticulata
ENSOMEG00000021560	-	87	37.625	ENSSLDG00000010601	-	84	37.625	Seriola_lalandi_dorsalis
ENSOMEG00000021560	-	89	33.484	ENSXETG00000034016	-	92	33.484	Xenopus_tropicalis
ENSOMEG00000021560	-	79	33.615	ENSXMAG00000021762	-	94	33.615	Xiphophorus_maculatus
ENSOMEG00000021560	-	98	30.807	ENSXMAG00000028274	-	85	30.807	Xiphophorus_maculatus
ENSOMEG00000021560	-	80	47.045	ENSXMAG00000023805	-	99	47.045	Xiphophorus_maculatus
ENSOMEG00000021560	-	98	45.544	ENSXMAG00000027070	-	80	45.544	Xiphophorus_maculatus
ENSOMEG00000021560	-	82	32.593	ENSXMAG00000024492	-	99	32.593	Xiphophorus_maculatus
ENSOMEG00000021560	-	90	36.617	ENSXMAG00000027558	-	75	36.617	Xiphophorus_maculatus