EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000021718 (Gene tree)
Gene ID: 112145887
Gene Symbol: arl5c
Alias: -
Full Name: ADP-ribosylation factor-like 5C
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3910 bases
Position: chrNVQA01000010.1:18548258-18552167
Accession: ZDB-GENE-040426-1866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000019917	MMR_HSR1	PF01926.23	1.5e-07	1	1
ENSOMEP00000019901	MMR_HSR1	PF01926.23	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000029269	-	1867	-	ENSOMEP00000019917	177 (aa)	-	-
ENSOMET00000029248	-	1842	-	ENSOMEP00000019901	189 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000021718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000021718's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000021718	arl5c	83	42.105	ENSOMEG00000016904	arl14	84	42.105
ENSOMEG00000021718	arl5c	90	43.114	ENSOMEG00000007253	arl4cb	86	43.114
ENSOMEG00000021718	arl5c	84	30.667	ENSOMEG00000023857	arl8bb	83	30.667
ENSOMEG00000021718	arl5c	90	42.138	ENSOMEG00000008521	arl2	88	40.994
ENSOMEG00000021718	arl5c	90	40.252	ENSOMEG00000007691	arl3	94	40.000
ENSOMEG00000021718	arl5c	95	46.154	ENSOMEG00000009575	arf3b	93	46.154
ENSOMEG00000021718	arl5c	90	39.264	ENSOMEG00000023152	-	83	39.506
ENSOMEG00000021718	arl5c	92	36.747	ENSOMEG00000017204	ARL6	91	36.527
ENSOMEG00000021718	arl5c	94	46.707	ENSOMEG00000002559	arf2b	92	46.707
ENSOMEG00000021718	arl5c	69	30.534	ENSOMEG00000019819	rab33ba	54	30.534
ENSOMEG00000021718	arl5c	76	34.058	ENSOMEG00000023727	ARL10	55	34.058
ENSOMEG00000021718	arl5c	95	71.598	ENSOMEG00000003634	arl8	94	71.598
ENSOMEG00000021718	arl5c	97	68.023	ENSOMEG00000017228	arl5a	96	68.023
ENSOMEG00000021718	arl5c	95	43.195	ENSOMEG00000000211	-	70	38.974
ENSOMEG00000021718	arl5c	83	31.293	ENSOMEG00000010187	arl13b	58	31.293
ENSOMEG00000021718	arl5c	95	36.872	ENSOMEG00000001352	arfrp1	89	36.872
ENSOMEG00000021718	arl5c	95	46.154	ENSOMEG00000017070	-	93	46.154
ENSOMEG00000021718	arl5c	94	46.707	ENSOMEG00000023784	-	93	46.707
ENSOMEG00000021718	arl5c	93	35.976	ENSOMEG00000005057	arl3l2	88	35.976
ENSOMEG00000021718	arl5c	77	43.066	ENSOMEG00000022678	-	84	43.066
ENSOMEG00000021718	arl5c	84	30.000	ENSOMEG00000001959	arl8ba	78	30.000
ENSOMEG00000021718	arl5c	92	44.785	ENSOMEG00000023497	arl1	88	43.902
ENSOMEG00000021718	arl5c	90	40.252	ENSOMEG00000003861	-	87	40.252
ENSOMEG00000021718	arl5c	89	42.683	ENSOMEG00000003868	arl4aa	86	42.683
ENSOMEG00000021718	arl5c	85	38.158	ENSOMEG00000007419	arl11	84	38.158
ENSOMEG00000021718	arl5c	87	45.679	ENSOMEG00000004308	arl4d	79	45.679
ENSOMEG00000021718	arl5c	95	46.746	ENSOMEG00000007598	-	96	46.512
ENSOMEG00000021718	arl5c	94	45.783	ENSOMEG00000020821	ARF5	92	45.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000021718	arl5c	98	84.393	ENSAPOG00000005821	arl5c	97	84.393	Acanthochromis_polyacanthus
ENSOMEG00000021718	arl5c	100	81.356	ENSACIG00000008975	arl5c	98	81.356	Amphilophus_citrinellus
ENSOMEG00000021718	arl5c	98	86.705	ENSAOCG00000010448	arl5c	97	86.705	Amphiprion_ocellaris
ENSOMEG00000021718	arl5c	98	86.705	ENSAPEG00000002699	arl5c	97	86.705	Amphiprion_percula
ENSOMEG00000021718	arl5c	98	83.237	ENSATEG00000000181	arl5c	97	83.237	Anabas_testudineus
ENSOMEG00000021718	arl5c	98	86.127	ENSACLG00000000922	arl5c	97	86.127	Astatotilapia_calliptera
ENSOMEG00000021718	arl5c	98	80.347	ENSAMXG00000031771	arl5c	97	80.347	Astyanax_mexicanus
ENSOMEG00000021718	arl5c	98	82.081	ENSCSEG00000009845	arl5c	97	82.081	Cynoglossus_semilaevis
ENSOMEG00000021718	arl5c	97	86.550	ENSCVAG00000012706	arl5c	96	86.550	Cyprinodon_variegatus
ENSOMEG00000021718	arl5c	98	79.191	ENSDARG00000035719	arl5c	97	79.191	Danio_rerio
ENSOMEG00000021718	arl5c	98	83.815	ENSELUG00000016864	arl5c	97	83.815	Esox_lucius
ENSOMEG00000021718	arl5c	98	87.861	ENSFHEG00000013677	arl5c	97	87.861	Fundulus_heteroclitus
ENSOMEG00000021718	arl5c	98	85.549	ENSGAFG00000002547	arl5c	97	85.549	Gambusia_affinis
ENSOMEG00000021718	arl5c	96	86.471	ENSGACG00000009321	arl5c	95	86.471	Gasterosteus_aculeatus
ENSOMEG00000021718	arl5c	98	86.127	ENSHBUG00000007301	arl5c	97	86.127	Haplochromis_burtoni
ENSOMEG00000021718	arl5c	98	79.191	ENSHCOG00000017576	-	97	79.191	Hippocampus_comes
ENSOMEG00000021718	arl5c	98	79.191	ENSIPUG00000023232	arl5c	97	79.191	Ictalurus_punctatus
ENSOMEG00000021718	arl5c	98	86.127	ENSKMAG00000011323	arl5c	97	86.127	Kryptolebias_marmoratus
ENSOMEG00000021718	arl5c	98	86.127	ENSLBEG00000006177	arl5c	83	86.127	Labrus_bergylta
ENSOMEG00000021718	arl5c	98	84.393	ENSMAMG00000022157	arl5c	97	84.393	Mastacembelus_armatus
ENSOMEG00000021718	arl5c	98	86.127	ENSMZEG00005022925	arl5c	97	86.127	Maylandia_zebra
ENSOMEG00000021718	arl5c	93	85.366	ENSMMOG00000020851	arl5c	97	84.848	Mola_mola
ENSOMEG00000021718	arl5c	93	85.976	ENSMALG00000009306	arl5c	93	85.976	Monopterus_albus
ENSOMEG00000021718	arl5c	98	86.127	ENSNBRG00000020245	arl5c	97	86.127	Neolamprologus_brichardi
ENSOMEG00000021718	arl5c	98	85.549	ENSONIG00000000890	arl5c	96	85.549	Oreochromis_niloticus
ENSOMEG00000021718	arl5c	98	95.954	ENSORLG00000002960	arl5c	97	95.954	Oryzias_latipes
ENSOMEG00000021718	arl5c	98	95.954	ENSORLG00020010074	arl5c	97	95.954	Oryzias_latipes_hni
ENSOMEG00000021718	arl5c	98	95.954	ENSORLG00015002752	arl5c	97	95.954	Oryzias_latipes_hsok
ENSOMEG00000021718	arl5c	98	81.503	ENSPKIG00000021727	arl5c	97	81.503	Paramormyrops_kingsleyae
ENSOMEG00000021718	arl5c	98	86.705	ENSPFOG00000007842	arl5c	96	86.705	Poecilia_formosa
ENSOMEG00000021718	arl5c	98	86.705	ENSPLAG00000002394	arl5c	97	86.705	Poecilia_latipinna
ENSOMEG00000021718	arl5c	95	85.207	ENSPMEG00000000631	arl5c	98	85.207	Poecilia_mexicana
ENSOMEG00000021718	arl5c	98	87.283	ENSPREG00000008730	arl5c	97	87.283	Poecilia_reticulata
ENSOMEG00000021718	arl5c	98	86.127	ENSPNYG00000012720	arl5c	97	86.127	Pundamilia_nyererei
ENSOMEG00000021718	arl5c	98	78.613	ENSPNAG00000002310	arl5c	97	78.613	Pygocentrus_nattereri
ENSOMEG00000021718	arl5c	98	80.347	ENSSFOG00015023529	arl5c	97	80.347	Scleropages_formosus
ENSOMEG00000021718	arl5c	98	84.971	ENSSMAG00000010552	arl5c	97	84.971	Scophthalmus_maximus
ENSOMEG00000021718	arl5c	98	82.659	ENSSDUG00000022640	arl5c	97	82.659	Seriola_dumerili
ENSOMEG00000021718	arl5c	98	82.659	ENSSLDG00000000728	arl5c	97	82.659	Seriola_lalandi_dorsalis
ENSOMEG00000021718	arl5c	98	85.549	ENSSPAG00000007687	arl5c	97	85.549	Stegastes_partitus
ENSOMEG00000021718	arl5c	98	83.815	ENSTRUG00000022814	arl5c	97	83.815	Takifugu_rubripes
ENSOMEG00000021718	arl5c	98	82.081	ENSTNIG00000003015	arl5c	96	82.081	Tetraodon_nigroviridis
ENSOMEG00000021718	arl5c	97	87.135	ENSXCOG00000017380	arl5c	96	87.135	Xiphophorus_couchianus
ENSOMEG00000021718	arl5c	97	86.550	ENSXMAG00000008447	arl5c	96	86.550	Xiphophorus_maculatus