EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000021739 (Gene tree)
Gene ID: 112159305
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3091 bases
Position: chrNVQA01000024.1:23508830-23511920
Accession: 112159305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000019934	zf-U11-48K	PF05253.12	8.2e-19	1	2
ENSOMEP00000019934	zf-U11-48K	PF05253.12	8.2e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000029311	-	1138	XM_024293310	ENSOMEP00000019934	170 (aa)	XP_024149078	UPI000CF7C2A0

Gene Model

Click here to download ENSOMEG00000021739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000021739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000021739	-	99	50.568	ENSOMEG00000021773	-	99	50.568
ENSOMEG00000021739	-	81	86.232	ENSOMEG00000013200	-	92	86.232
ENSOMEG00000021739	-	64	69.725	ENSOMEG00000013182	-	74	69.725

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000021739	-	95	49.412	ENSAPOG00000021951	-	96	49.412	Acanthochromis_polyacanthus
ENSOMEG00000021739	-	81	54.745	ENSAPOG00000000311	-	80	54.745	Acanthochromis_polyacanthus
ENSOMEG00000021739	-	100	52.841	ENSACIG00000013400	zgc:56699	100	52.841	Amphilophus_citrinellus
ENSOMEG00000021739	-	94	54.762	ENSAOCG00000013650	-	95	54.762	Amphiprion_ocellaris
ENSOMEG00000021739	-	94	48.193	ENSAPEG00000006689	zgc:56699	94	48.193	Amphiprion_percula
ENSOMEG00000021739	-	99	56.180	ENSATEG00000024058	zgc:56699	99	56.180	Anabas_testudineus
ENSOMEG00000021739	-	99	54.444	ENSACLG00000023562	zgc:56699	92	54.444	Astatotilapia_calliptera
ENSOMEG00000021739	-	98	54.144	ENSAMXG00000038346	zgc:56699	99	54.144	Astyanax_mexicanus
ENSOMEG00000021739	-	84	47.712	ENSAMXG00000036095	-	64	47.712	Astyanax_mexicanus
ENSOMEG00000021739	-	97	52.874	ENSCSEG00000021520	zgc:56699	83	52.874	Cynoglossus_semilaevis
ENSOMEG00000021739	-	82	48.571	ENSCVAG00000009972	zgc:56699	76	48.571	Cyprinodon_variegatus
ENSOMEG00000021739	-	84	47.712	ENSDARG00000099586	CR382383.2	85	47.712	Danio_rerio
ENSOMEG00000021739	-	94	48.295	ENSDARG00000000887	zgc:56699	97	48.295	Danio_rerio
ENSOMEG00000021739	-	77	40.580	ENSEBUG00000005577	-	71	40.580	Eptatretus_burgeri
ENSOMEG00000021739	-	84	53.642	ENSELUG00000003242	gtsf1	83	53.642	Esox_lucius
ENSOMEG00000021739	-	98	50.847	ENSFHEG00000006036	zgc:56699	98	44.571	Fundulus_heteroclitus
ENSOMEG00000021739	-	82	47.222	ENSGMOG00000007295	zgc:56699	98	47.222	Gadus_morhua
ENSOMEG00000021739	-	76	42.336	ENSGALG00000035365	-	77	42.336	Gallus_gallus
ENSOMEG00000021739	-	97	55.429	ENSGAFG00000020743	zgc:56699	98	55.429	Gambusia_affinis
ENSOMEG00000021739	-	99	53.889	ENSHBUG00000005327	zgc:56699	100	53.889	Haplochromis_burtoni
ENSOMEG00000021739	-	96	46.243	ENSHCOG00000010296	-	99	46.243	Hippocampus_comes
ENSOMEG00000021739	-	96	47.486	ENSIPUG00000011498	zgc:56699	93	48.571	Ictalurus_punctatus
ENSOMEG00000021739	-	97	57.803	ENSLBEG00000015981	zgc:56699	100	52.096	Labrus_bergylta
ENSOMEG00000021739	-	81	44.366	ENSLOCG00000004469	zgc:56699	98	44.366	Lepisosteus_oculatus
ENSOMEG00000021739	-	85	58.940	ENSMAMG00000001846	zgc:56699	85	58.940	Mastacembelus_armatus
ENSOMEG00000021739	-	99	54.444	ENSMZEG00005026479	zgc:56699	92	54.444	Maylandia_zebra
ENSOMEG00000021739	-	100	40.984	ENSMMOG00000017331	zgc:56699	100	40.984	Mola_mola
ENSOMEG00000021739	-	99	53.889	ENSNBRG00000006336	zgc:56699	100	53.889	Neolamprologus_brichardi
ENSOMEG00000021739	-	99	55.000	ENSONIG00000016720	zgc:56699	92	55.000	Oreochromis_niloticus
ENSOMEG00000021739	-	64	38.983	ENSOANG00000030381	-	74	38.983	Ornithorhynchus_anatinus
ENSOMEG00000021739	-	87	50.327	ENSORLG00000025877	-	91	50.327	Oryzias_latipes
ENSOMEG00000021739	-	100	72.254	ENSORLG00000015258	-	100	72.254	Oryzias_latipes
ENSOMEG00000021739	-	87	50.327	ENSORLG00020011013	-	91	50.327	Oryzias_latipes_hni
ENSOMEG00000021739	-	100	70.520	ENSORLG00020010990	-	100	70.520	Oryzias_latipes_hni
ENSOMEG00000021739	-	100	71.676	ENSORLG00015004961	zgc:56699	100	71.676	Oryzias_latipes_hsok
ENSOMEG00000021739	-	94	48.295	ENSPKIG00000017039	zgc:56699	97	48.295	Paramormyrops_kingsleyae
ENSOMEG00000021739	-	96	47.093	ENSPMGG00000023241	zgc:56699	96	47.093	Periophthalmus_magnuspinnatus
ENSOMEG00000021739	-	65	40.833	ENSPMAG00000009653	-	93	40.833	Petromyzon_marinus
ENSOMEG00000021739	-	97	54.286	ENSPFOG00000009204	zgc:56699	98	54.286	Poecilia_formosa
ENSOMEG00000021739	-	97	50.292	ENSPLAG00000009088	zgc:56699	97	50.292	Poecilia_latipinna
ENSOMEG00000021739	-	97	54.286	ENSPMEG00000001443	zgc:56699	98	54.286	Poecilia_mexicana
ENSOMEG00000021739	-	97	55.429	ENSPREG00000000745	zgc:56699	98	55.429	Poecilia_reticulata
ENSOMEG00000021739	-	99	54.444	ENSPNYG00000002811	zgc:56699	100	54.444	Pundamilia_nyererei
ENSOMEG00000021739	-	96	51.397	ENSPNAG00000005165	zgc:56699	99	51.397	Pygocentrus_nattereri
ENSOMEG00000021739	-	82	51.034	ENSSFOG00015021600	zgc:56699	81	51.034	Scleropages_formosus
ENSOMEG00000021739	-	100	54.545	ENSSMAG00000020886	zgc:56699	100	54.545	Scophthalmus_maximus
ENSOMEG00000021739	-	99	56.983	ENSSDUG00000002033	zgc:56699	99	56.983	Seriola_dumerili
ENSOMEG00000021739	-	99	56.425	ENSSLDG00000014113	zgc:56699	99	56.425	Seriola_lalandi_dorsalis
ENSOMEG00000021739	-	86	52.201	ENSSPAG00000010005	-	99	52.201	Stegastes_partitus
ENSOMEG00000021739	-	95	58.788	ENSSPAG00000019854	-	96	59.394	Stegastes_partitus
ENSOMEG00000021739	-	98	48.603	ENSTRUG00000015537	zgc:56699	99	48.603	Takifugu_rubripes
ENSOMEG00000021739	-	83	54.795	ENSTNIG00000012515	zgc:56699	98	54.795	Tetraodon_nigroviridis
ENSOMEG00000021739	-	97	50.877	ENSXCOG00000014400	zgc:56699	87	50.877	Xiphophorus_couchianus
ENSOMEG00000021739	-	97	55.429	ENSXMAG00000011692	zgc:56699	98	55.429	Xiphophorus_maculatus