EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000021773 (Gene tree)
Gene ID: 112159345
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3420 bases
Position: chrNVQA01000024.1:23502248-23505667
Accession: 112159345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000019963	zf-U11-48K	PF05253.12	2.3e-17	1	2
ENSOMEP00000019963	zf-U11-48K	PF05253.12	2.3e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000029315	-	1500	-	ENSOMEP00000019963	178 (aa)	XP_024149131	UPI000CF7DA69

Gene Model

Click here to download ENSOMEG00000021773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000021773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000021773	-	75	33.835	ENSOMEG00000013182	-	86	33.835
ENSOMEG00000021773	-	99	50.568	ENSOMEG00000021739	-	99	50.568
ENSOMEG00000021773	-	80	50.704	ENSOMEG00000013200	-	92	50.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000021773	-	96	51.462	ENSAPOG00000021951	-	97	51.462	Acanthochromis_polyacanthus
ENSOMEG00000021773	-	79	54.610	ENSAPOG00000000311	-	80	54.610	Acanthochromis_polyacanthus
ENSOMEG00000021773	-	99	54.494	ENSACIG00000013400	zgc:56699	99	54.494	Amphilophus_citrinellus
ENSOMEG00000021773	-	96	54.070	ENSAOCG00000013650	-	97	54.070	Amphiprion_ocellaris
ENSOMEG00000021773	-	96	46.471	ENSAPEG00000006689	zgc:56699	95	46.471	Amphiprion_percula
ENSOMEG00000021773	-	99	61.798	ENSATEG00000024058	zgc:56699	99	61.798	Anabas_testudineus
ENSOMEG00000021773	-	99	56.667	ENSACLG00000023562	zgc:56699	92	56.667	Astatotilapia_calliptera
ENSOMEG00000021773	-	97	45.856	ENSAMXG00000038346	zgc:56699	99	45.856	Astyanax_mexicanus
ENSOMEG00000021773	-	79	51.701	ENSAMXG00000036095	-	61	51.701	Astyanax_mexicanus
ENSOMEG00000021773	-	97	57.143	ENSCSEG00000021520	zgc:56699	83	57.143	Cynoglossus_semilaevis
ENSOMEG00000021773	-	81	53.103	ENSCVAG00000009972	zgc:56699	76	53.103	Cyprinodon_variegatus
ENSOMEG00000021773	-	96	42.458	ENSDARG00000000887	zgc:56699	98	42.458	Danio_rerio
ENSOMEG00000021773	-	80	51.656	ENSDARG00000099586	CR382383.2	83	51.656	Danio_rerio
ENSOMEG00000021773	-	72	38.636	ENSEBUG00000005577	-	70	38.636	Eptatretus_burgeri
ENSOMEG00000021773	-	90	49.123	ENSELUG00000003242	gtsf1	94	49.123	Esox_lucius
ENSOMEG00000021773	-	98	56.497	ENSFHEG00000006036	zgc:56699	98	49.714	Fundulus_heteroclitus
ENSOMEG00000021773	-	81	46.528	ENSGMOG00000007295	zgc:56699	98	46.528	Gadus_morhua
ENSOMEG00000021773	-	57	44.340	ENSGALG00000035365	-	60	44.340	Gallus_gallus
ENSOMEG00000021773	-	96	60.465	ENSGAFG00000020743	zgc:56699	96	60.465	Gambusia_affinis
ENSOMEG00000021773	-	99	57.222	ENSHBUG00000005327	zgc:56699	100	57.222	Haplochromis_burtoni
ENSOMEG00000021773	-	96	48.555	ENSHCOG00000010296	-	99	48.555	Hippocampus_comes
ENSOMEG00000021773	-	96	41.573	ENSIPUG00000011498	zgc:56699	95	41.573	Ictalurus_punctatus
ENSOMEG00000021773	-	97	60.571	ENSLBEG00000015981	zgc:56699	100	52.601	Labrus_bergylta
ENSOMEG00000021773	-	78	45.714	ENSLOCG00000004469	zgc:56699	97	45.714	Lepisosteus_oculatus
ENSOMEG00000021773	-	97	56.897	ENSMAMG00000001846	zgc:56699	98	56.897	Mastacembelus_armatus
ENSOMEG00000021773	-	99	56.667	ENSMZEG00005026479	zgc:56699	92	56.667	Maylandia_zebra
ENSOMEG00000021773	-	84	55.333	ENSMMOG00000017331	zgc:56699	80	55.333	Mola_mola
ENSOMEG00000021773	-	99	56.667	ENSNBRG00000006336	zgc:56699	100	56.667	Neolamprologus_brichardi
ENSOMEG00000021773	-	99	56.667	ENSONIG00000016720	zgc:56699	92	56.667	Oreochromis_niloticus
ENSOMEG00000021773	-	61	39.286	ENSOANG00000030381	-	74	39.286	Ornithorhynchus_anatinus
ENSOMEG00000021773	-	99	49.432	ENSORLG00000015258	-	99	49.432	Oryzias_latipes
ENSOMEG00000021773	-	85	80.263	ENSORLG00000025877	-	91	80.263	Oryzias_latipes
ENSOMEG00000021773	-	99	48.864	ENSORLG00020010990	-	99	48.864	Oryzias_latipes_hni
ENSOMEG00000021773	-	85	80.263	ENSORLG00020011013	-	91	80.263	Oryzias_latipes_hni
ENSOMEG00000021773	-	99	49.432	ENSORLG00015004961	zgc:56699	99	49.432	Oryzias_latipes_hsok
ENSOMEG00000021773	-	96	46.023	ENSPKIG00000017039	zgc:56699	98	46.023	Paramormyrops_kingsleyae
ENSOMEG00000021773	-	98	52.809	ENSPMGG00000023241	zgc:56699	98	52.809	Periophthalmus_magnuspinnatus
ENSOMEG00000021773	-	62	44.167	ENSPMAG00000009653	-	93	44.167	Petromyzon_marinus
ENSOMEG00000021773	-	96	59.302	ENSPFOG00000009204	zgc:56699	96	59.302	Poecilia_formosa
ENSOMEG00000021773	-	96	55.814	ENSPLAG00000009088	zgc:56699	95	56.395	Poecilia_latipinna
ENSOMEG00000021773	-	96	59.302	ENSPMEG00000001443	zgc:56699	96	59.302	Poecilia_mexicana
ENSOMEG00000021773	-	96	60.465	ENSPREG00000000745	zgc:56699	96	60.465	Poecilia_reticulata
ENSOMEG00000021773	-	99	56.667	ENSPNYG00000002811	zgc:56699	100	56.667	Pundamilia_nyererei
ENSOMEG00000021773	-	78	53.846	ENSPNAG00000005165	zgc:56699	79	53.846	Pygocentrus_nattereri
ENSOMEG00000021773	-	83	51.656	ENSSFOG00015021600	zgc:56699	84	51.656	Scleropages_formosus
ENSOMEG00000021773	-	97	57.803	ENSSMAG00000020886	zgc:56699	97	57.803	Scophthalmus_maximus
ENSOMEG00000021773	-	99	61.236	ENSSDUG00000002033	zgc:56699	99	61.236	Seriola_dumerili
ENSOMEG00000021773	-	99	61.236	ENSSLDG00000014113	zgc:56699	99	61.236	Seriola_lalandi_dorsalis
ENSOMEG00000021773	-	78	62.411	ENSSPAG00000019854	-	98	55.491	Stegastes_partitus
ENSOMEG00000021773	-	84	47.436	ENSSPAG00000010005	-	99	47.436	Stegastes_partitus
ENSOMEG00000021773	-	98	48.333	ENSTRUG00000015537	zgc:56699	99	48.333	Takifugu_rubripes
ENSOMEG00000021773	-	77	53.623	ENSTNIG00000012515	zgc:56699	93	53.623	Tetraodon_nigroviridis
ENSOMEG00000021773	-	96	54.070	ENSXCOG00000014400	zgc:56699	85	54.070	Xiphophorus_couchianus
ENSOMEG00000021773	-	96	58.721	ENSXMAG00000011692	zgc:56699	96	58.721	Xiphophorus_maculatus