EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000021943 (Gene tree)
Gene ID: 112152151
Gene Symbol: fubp1
Alias: -
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 10613 bases
Position: chrNVQA01000002.1:4491198-4501810
Accession: 112152151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000034936	KH_1	PF00013.29	1.4e-68	1	4
ENSOMEP00000034936	KH_1	PF00013.29	1.4e-68	2	4
ENSOMEP00000034936	KH_1	PF00013.29	1.4e-68	3	4
ENSOMEP00000034936	KH_1	PF00013.29	1.4e-68	4	4
ENSOMEP00000020091	KH_1	PF00013.29	2.4e-68	1	4
ENSOMEP00000020091	KH_1	PF00013.29	2.4e-68	2	4
ENSOMEP00000020091	KH_1	PF00013.29	2.4e-68	3	4
ENSOMEP00000020091	KH_1	PF00013.29	2.4e-68	4	4
ENSOMEP00000034936	KH_2	PF07650.17	7.1e-21	1	2
ENSOMEP00000034936	KH_2	PF07650.17	7.1e-21	2	2
ENSOMEP00000020091	KH_2	PF07650.17	9.6e-21	1	2
ENSOMEP00000020091	KH_2	PF07650.17	9.6e-21	2	2
ENSOMEP00000020091	DUF1897	PF09005.10	2e-15	1	2
ENSOMEP00000020091	DUF1897	PF09005.10	2e-15	2	2
ENSOMEP00000034936	DUF1897	PF09005.10	4.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000029700	-	3602	-	ENSOMEP00000020091	673 (aa)	XP_024137289	UPI000CF82B81
ENSOMET00000029403	-	1833	-	ENSOMEP00000034936	610 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000021943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000021943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000021943	fubp1	57	30.952	ENSOMEG00000017916	igf2bp3	68	30.612
ENSOMEG00000021943	fubp1	61	41.176	ENSOMEG00000005759	pcbp2	89	41.176
ENSOMEG00000021943	fubp1	55	30.488	ENSOMEG00000001908	igf2bp2b	62	30.488
ENSOMEG00000021943	fubp1	63	32.886	ENSOMEG00000015459	-	66	32.886
ENSOMEG00000021943	fubp1	55	38.202	ENSOMEG00000020811	pcbp3	79	38.202
ENSOMEG00000021943	fubp1	61	42.647	ENSOMEG00000019014	PCBP2	75	42.647
ENSOMEG00000021943	fubp1	98	48.350	ENSOMEG00000004190	fubp3	97	48.403
ENSOMEG00000021943	fubp1	65	33.871	ENSOMEG00000022949	-	69	30.405
ENSOMEG00000021943	fubp1	53	35.443	ENSOMEG00000003516	-	62	36.000
ENSOMEG00000021943	fubp1	96	49.502	ENSOMEG00000007725	-	94	58.701
ENSOMEG00000021943	fubp1	99	53.799	ENSOMEG00000013233	khsrp	70	56.957
ENSOMEG00000021943	fubp1	58	39.726	ENSOMEG00000020162	-	76	37.000
ENSOMEG00000021943	fubp1	53	37.037	ENSOMEG00000011545	-	50	37.209

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000021943	fubp1	70	75.991	ENSG00000162613	FUBP1	100	70.388	Homo_sapiens
ENSOMEG00000021943	fubp1	99	90.750	ENSAPOG00000014845	fubp1	98	90.750	Acanthochromis_polyacanthus
ENSOMEG00000021943	fubp1	70	72.537	ENSAMEG00000007372	FUBP1	100	68.114	Ailuropoda_melanoleuca
ENSOMEG00000021943	fubp1	100	89.120	ENSACIG00000020024	fubp1	100	89.120	Amphilophus_citrinellus
ENSOMEG00000021943	fubp1	100	87.440	ENSAPEG00000012232	fubp1	100	87.122	Amphiprion_percula
ENSOMEG00000021943	fubp1	99	91.368	ENSATEG00000018619	fubp1	100	93.303	Anabas_testudineus
ENSOMEG00000021943	fubp1	65	76.755	ENSAPLG00000005965	FUBP1	68	79.562	Anas_platyrhynchos
ENSOMEG00000021943	fubp1	70	71.882	ENSACAG00000006310	FUBP1	96	67.826	Anolis_carolinensis
ENSOMEG00000021943	fubp1	97	93.425	ENSACLG00000006708	fubp1	100	92.988	Astatotilapia_calliptera
ENSOMEG00000021943	fubp1	87	84.369	ENSAMXG00000005525	fubp1	99	84.181	Astyanax_mexicanus
ENSOMEG00000021943	fubp1	70	76.211	ENSCJAG00000007062	FUBP1	100	70.497	Callithrix_jacchus
ENSOMEG00000021943	fubp1	70	76.211	ENSCAFG00000020361	FUBP1	100	70.543	Canis_familiaris
ENSOMEG00000021943	fubp1	65	78.660	ENSTSYG00000000148	FUBP1	100	70.744	Carlito_syrichta
ENSOMEG00000021943	fubp1	56	83.065	ENSCAPG00000011052	-	65	83.065	Cavia_aperea
ENSOMEG00000021943	fubp1	70	76.211	ENSCPOG00000002757	FUBP1	98	67.947	Cavia_porcellus
ENSOMEG00000021943	fubp1	89	64.058	ENSCCAG00000036537	FUBP1	100	64.638	Cebus_capucinus
ENSOMEG00000021943	fubp1	70	75.991	ENSCATG00000042126	FUBP1	100	70.388	Cercocebus_atys
ENSOMEG00000021943	fubp1	70	78.719	ENSCLAG00000005621	FUBP1	100	70.388	Chinchilla_lanigera
ENSOMEG00000021943	fubp1	70	75.991	ENSCSAG00000001402	FUBP1	100	70.388	Chlorocebus_sabaeus
ENSOMEG00000021943	fubp1	70	75.991	ENSCHOG00000008177	FUBP1	98	70.497	Choloepus_hoffmanni
ENSOMEG00000021943	fubp1	70	77.060	ENSCGRG00001007103	Fubp1	100	70.762	Cricetulus_griseus_chok1gshd
ENSOMEG00000021943	fubp1	65	77.295	ENSCGRG00000003372	Fubp1	100	70.395	Cricetulus_griseus_crigri
ENSOMEG00000021943	fubp1	100	87.107	ENSCSEG00000021412	fubp1	100	87.107	Cynoglossus_semilaevis
ENSOMEG00000021943	fubp1	97	93.893	ENSCVAG00000014487	fubp1	99	93.588	Cyprinodon_variegatus
ENSOMEG00000021943	fubp1	100	77.709	ENSDARG00000029248	fubp1	100	82.667	Danio_rerio
ENSOMEG00000021943	fubp1	82	55.128	ENSDNOG00000034565	-	87	51.613	Dasypus_novemcinctus
ENSOMEG00000021943	fubp1	70	76.432	ENSDORG00000016534	Fubp1	98	70.497	Dipodomys_ordii
ENSOMEG00000021943	fubp1	76	74.854	ENSETEG00000000948	-	58	78.655	Echinops_telfairi
ENSOMEG00000021943	fubp1	90	43.886	ENSEBUG00000016143	fubp1	63	65.000	Eptatretus_burgeri
ENSOMEG00000021943	fubp1	70	80.743	ENSEEUG00000001287	FUBP1	87	67.816	Erinaceus_europaeus
ENSOMEG00000021943	fubp1	97	83.234	ENSELUG00000007990	fubp1	100	83.683	Esox_lucius
ENSOMEG00000021943	fubp1	70	75.610	ENSFALG00000005768	FUBP1	68	78.174	Ficedula_albicollis
ENSOMEG00000021943	fubp1	70	75.991	ENSFDAG00000014210	FUBP1	98	70.342	Fukomys_damarensis
ENSOMEG00000021943	fubp1	97	93.760	ENSFHEG00000005230	fubp1	100	93.455	Fundulus_heteroclitus
ENSOMEG00000021943	fubp1	100	82.540	ENSGMOG00000003370	fubp1	100	82.698	Gadus_morhua
ENSOMEG00000021943	fubp1	70	76.106	ENSGALG00000008939	FUBP1	76	80.193	Gallus_gallus
ENSOMEG00000021943	fubp1	97	92.216	ENSGAFG00000020972	fubp1	100	91.916	Gambusia_affinis
ENSOMEG00000021943	fubp1	100	86.385	ENSGACG00000016563	fubp1	100	87.011	Gasterosteus_aculeatus
ENSOMEG00000021943	fubp1	97	93.598	ENSHBUG00000009835	fubp1	100	93.140	Haplochromis_burtoni
ENSOMEG00000021943	fubp1	70	76.211	ENSHGLG00000008415	-	100	70.216	Heterocephalus_glaber_female
ENSOMEG00000021943	fubp1	72	71.739	ENSHGLG00000002808	-	72	73.230	Heterocephalus_glaber_female
ENSOMEG00000021943	fubp1	70	76.211	ENSHGLG00100003417	-	100	70.216	Heterocephalus_glaber_male
ENSOMEG00000021943	fubp1	72	72.391	ENSHGLG00100001414	-	72	74.115	Heterocephalus_glaber_male
ENSOMEG00000021943	fubp1	97	89.866	ENSHCOG00000000910	fubp1	100	90.164	Hippocampus_comes
ENSOMEG00000021943	fubp1	97	81.750	ENSIPUG00000009896	fubp1	100	82.353	Ictalurus_punctatus
ENSOMEG00000021943	fubp1	70	78.311	ENSSTOG00000014312	FUBP1	100	70.543	Ictidomys_tridecemlineatus
ENSOMEG00000021943	fubp1	70	77.027	ENSJJAG00000020069	Fubp1	100	69.706	Jaculus_jaculus
ENSOMEG00000021943	fubp1	100	91.961	ENSKMAG00000018897	fubp1	100	92.694	Kryptolebias_marmoratus
ENSOMEG00000021943	fubp1	99	89.912	ENSLBEG00000012700	fubp1	99	90.643	Labrus_bergylta
ENSOMEG00000021943	fubp1	95	78.209	ENSLOCG00000003745	fubp1	99	78.216	Lepisosteus_oculatus
ENSOMEG00000021943	fubp1	70	72.939	ENSLAFG00000003273	FUBP1	99	72.283	Loxodonta_africana
ENSOMEG00000021943	fubp1	70	75.991	ENSMFAG00000031825	FUBP1	100	70.342	Macaca_fascicularis
ENSOMEG00000021943	fubp1	70	78.082	ENSMMUG00000002899	FUBP1	100	70.388	Macaca_mulatta
ENSOMEG00000021943	fubp1	70	75.991	ENSMNEG00000045212	FUBP1	100	70.388	Macaca_nemestrina
ENSOMEG00000021943	fubp1	97	92.342	ENSMAMG00000007489	fubp1	99	91.892	Mastacembelus_armatus
ENSOMEG00000021943	fubp1	100	91.520	ENSMZEG00005024298	fubp1	100	92.988	Maylandia_zebra
ENSOMEG00000021943	fubp1	65	76.812	ENSMGAG00000009424	FUBP1	68	79.854	Meleagris_gallopavo
ENSOMEG00000021943	fubp1	70	76.211	ENSMAUG00000016428	Fubp1	98	69.085	Mesocricetus_auratus
ENSOMEG00000021943	fubp1	70	78.311	ENSMOCG00000014751	Fubp1	100	71.949	Microtus_ochrogaster
ENSOMEG00000021943	fubp1	88	91.590	ENSMMOG00000019463	fubp1	99	91.590	Mola_mola
ENSOMEG00000021943	fubp1	67	68.989	ENSMODG00000020804	FUBP1	100	63.253	Monodelphis_domestica
ENSOMEG00000021943	fubp1	97	92.998	ENSMALG00000015173	fubp1	100	93.303	Monopterus_albus
ENSOMEG00000021943	fubp1	70	76.889	MGP_CAROLIEiJ_G0025740	Fubp1	99	73.372	Mus_caroli
ENSOMEG00000021943	fubp1	70	76.667	ENSMUSG00000028034	Fubp1	99	73.180	Mus_musculus
ENSOMEG00000021943	fubp1	70	76.718	MGP_PahariEiJ_G0027191	Fubp1	99	73.231	Mus_pahari
ENSOMEG00000021943	fubp1	70	76.889	MGP_SPRETEiJ_G0026693	Fubp1	99	73.372	Mus_spretus
ENSOMEG00000021943	fubp1	70	72.385	ENSMLUG00000014802	FUBP1	71	73.950	Myotis_lucifugus
ENSOMEG00000021943	fubp1	70	75.286	ENSNGAG00000014302	Fubp1	100	69.243	Nannospalax_galili
ENSOMEG00000021943	fubp1	100	89.525	ENSNBRG00000015099	fubp1	100	89.431	Neolamprologus_brichardi
ENSOMEG00000021943	fubp1	70	71.491	ENSNLEG00000009772	FUBP1	100	65.288	Nomascus_leucogenys
ENSOMEG00000021943	fubp1	69	86.792	ENSOPRG00000001175	FUBP1	61	86.792	Ochotona_princeps
ENSOMEG00000021943	fubp1	70	76.211	ENSODEG00000002600	-	98	70.497	Octodon_degus
ENSOMEG00000021943	fubp1	99	52.480	ENSODEG00000003657	-	71	56.193	Octodon_degus
ENSOMEG00000021943	fubp1	97	93.578	ENSONIG00000018381	fubp1	97	93.119	Oreochromis_niloticus
ENSOMEG00000021943	fubp1	57	83.003	ENSOANG00000009777	FUBP1	99	68.019	Ornithorhynchus_anatinus
ENSOMEG00000021943	fubp1	99	92.569	ENSORLG00000003540	fubp1	99	92.569	Oryzias_latipes
ENSOMEG00000021943	fubp1	99	99.254	ENSORLG00020005908	fubp1	98	99.254	Oryzias_latipes_hni
ENSOMEG00000021943	fubp1	99	99.106	ENSORLG00015008779	fubp1	99	99.238	Oryzias_latipes_hsok
ENSOMEG00000021943	fubp1	70	72.234	ENSOGAG00000014233	FUBP1	100	67.560	Otolemur_garnettii
ENSOMEG00000021943	fubp1	70	76.159	ENSOARG00000013259	FUBP1	100	70.920	Ovis_aries
ENSOMEG00000021943	fubp1	70	76.211	ENSPPRG00000000413	FUBP1	100	70.543	Panthera_pardus
ENSOMEG00000021943	fubp1	70	76.211	ENSPTIG00000019450	FUBP1	100	70.543	Panthera_tigris_altaica
ENSOMEG00000021943	fubp1	66	76.429	ENSPSIG00000012965	FUBP1	69	78.469	Pelodiscus_sinensis
ENSOMEG00000021943	fubp1	99	84.516	ENSPMGG00000009060	fubp1	99	80.060	Periophthalmus_magnuspinnatus
ENSOMEG00000021943	fubp1	70	76.837	ENSPEMG00000021802	Fubp1	98	68.006	Peromyscus_maniculatus_bairdii
ENSOMEG00000021943	fubp1	62	57.642	ENSPMAG00000001644	-	93	60.262	Petromyzon_marinus
ENSOMEG00000021943	fubp1	97	94.216	ENSPFOG00000000238	fubp1	100	93.912	Poecilia_formosa
ENSOMEG00000021943	fubp1	100	88.057	ENSPLAG00000021170	fubp1	100	91.172	Poecilia_latipinna
ENSOMEG00000021943	fubp1	99	91.883	ENSPMEG00000004747	fubp1	99	95.485	Poecilia_mexicana
ENSOMEG00000021943	fubp1	97	94.064	ENSPREG00000017911	fubp1	100	93.760	Poecilia_reticulata
ENSOMEG00000021943	fubp1	72	75.431	ENSPPYG00000001219	-	68	78.271	Pongo_abelii
ENSOMEG00000021943	fubp1	70	76.159	ENSPCAG00000012617	FUBP1	98	68.202	Procavia_capensis
ENSOMEG00000021943	fubp1	70	77.130	ENSPCOG00000024974	FUBP1	100	70.543	Propithecus_coquereli
ENSOMEG00000021943	fubp1	70	70.264	ENSPVAG00000014637	FUBP1	98	63.798	Pteropus_vampyrus
ENSOMEG00000021943	fubp1	97	93.445	ENSPNYG00000004552	fubp1	100	92.988	Pundamilia_nyererei
ENSOMEG00000021943	fubp1	97	83.459	ENSPNAG00000016207	fubp1	100	84.211	Pygocentrus_nattereri
ENSOMEG00000021943	fubp1	70	76.169	ENSRNOG00000043370	Fubp1	100	70.295	Rattus_norvegicus
ENSOMEG00000021943	fubp1	70	75.991	ENSRBIG00000042950	FUBP1	100	70.388	Rhinopithecus_bieti
ENSOMEG00000021943	fubp1	70	75.991	ENSRROG00000043534	FUBP1	100	70.388	Rhinopithecus_roxellana
ENSOMEG00000021943	fubp1	70	76.211	ENSSBOG00000027299	FUBP1	98	73.258	Saimiri_boliviensis_boliviensis
ENSOMEG00000021943	fubp1	60	82.436	ENSSHAG00000005367	FUBP1	99	73.162	Sarcophilus_harrisii
ENSOMEG00000021943	fubp1	97	82.901	ENSSFOG00015010213	fubp1	99	82.290	Scleropages_formosus
ENSOMEG00000021943	fubp1	98	88.071	ENSSMAG00000012029	fubp1	99	90.574	Scophthalmus_maximus
ENSOMEG00000021943	fubp1	99	91.016	ENSSDUG00000007383	fubp1	99	91.016	Seriola_dumerili
ENSOMEG00000021943	fubp1	99	91.016	ENSSLDG00000022863	fubp1	99	91.016	Seriola_lalandi_dorsalis
ENSOMEG00000021943	fubp1	70	86.207	ENSSARG00000011730	FUBP1	56	87.209	Sorex_araneus
ENSOMEG00000021943	fubp1	97	66.913	ENSSPUG00000008389	FUBP1	100	67.821	Sphenodon_punctatus
ENSOMEG00000021943	fubp1	97	94.368	ENSSPAG00000010161	fubp1	100	94.064	Stegastes_partitus
ENSOMEG00000021943	fubp1	65	75.895	ENSTGUG00000006841	FUBP1	69	78.657	Taeniopygia_guttata
ENSOMEG00000021943	fubp1	100	85.776	ENSTRUG00000004615	fubp1	100	86.854	Takifugu_rubripes
ENSOMEG00000021943	fubp1	77	79.762	ENSTBEG00000017333	FUBP1	62	85.714	Tupaia_belangeri
ENSOMEG00000021943	fubp1	70	76.211	ENSTTRG00000000096	FUBP1	98	70.342	Tursiops_truncatus
ENSOMEG00000021943	fubp1	70	76.211	ENSVPAG00000004709	FUBP1	99	70.342	Vicugna_pacos
ENSOMEG00000021943	fubp1	100	85.167	ENSXCOG00000019354	fubp1	100	84.848	Xiphophorus_couchianus
ENSOMEG00000021943	fubp1	97	87.255	ENSXMAG00000007168	fubp1	99	95.151	Xiphophorus_maculatus