EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000022007 (Gene tree)
Gene ID: 112143121
Gene Symbol: snrnp48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 4992 bases
Position: chrNVQA01000006.1:442748-447739
Accession: 112143121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000020165	zf-U11-48K	PF05253.12	8.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000029586	-	1204	XM_024266869	ENSOMEP00000020165	338 (aa)	XP_024122637	UPI000CF81012

Gene Model

Click here to download ENSOMEG00000022007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022007's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000022007	snrnp48	82	47.917	ENSG00000168566	SNRNP48	83	47.222	Homo_sapiens
ENSOMEG00000022007	snrnp48	94	79.321	ENSAPOG00000021430	snrnp48	93	79.874	Acanthochromis_polyacanthus
ENSOMEG00000022007	snrnp48	95	45.058	ENSAMEG00000017349	SNRNP48	84	47.279	Ailuropoda_melanoleuca
ENSOMEG00000022007	snrnp48	93	73.186	ENSACIG00000002032	snrnp48	93	72.871	Amphilophus_citrinellus
ENSOMEG00000022007	snrnp48	94	79.630	ENSAOCG00000010562	snrnp48	93	79.874	Amphiprion_ocellaris
ENSOMEG00000022007	snrnp48	94	79.814	ENSAPEG00000003231	snrnp48	93	80.063	Amphiprion_percula
ENSOMEG00000022007	snrnp48	92	77.460	ENSATEG00000020210	snrnp48	94	78.344	Anabas_testudineus
ENSOMEG00000022007	snrnp48	80	50.515	ENSACAG00000002811	SNRNP48	74	54.772	Anolis_carolinensis
ENSOMEG00000022007	snrnp48	82	48.264	ENSANAG00000033538	SNRNP48	83	47.569	Aotus_nancymaae
ENSOMEG00000022007	snrnp48	93	57.680	ENSAMXG00000015309	snrnp48	95	58.044	Astyanax_mexicanus
ENSOMEG00000022007	snrnp48	91	44.012	ENSBTAG00000001123	SNRNP48	82	46.154	Bos_taurus
ENSOMEG00000022007	snrnp48	82	48.264	ENSCJAG00000021330	SNRNP48	83	47.569	Callithrix_jacchus
ENSOMEG00000022007	snrnp48	95	43.478	ENSCAFG00000009574	SNRNP48	69	47.222	Canis_familiaris
ENSOMEG00000022007	snrnp48	95	43.478	ENSCAFG00020013203	SNRNP48	83	47.222	Canis_lupus_dingo
ENSOMEG00000022007	snrnp48	91	44.311	ENSCHIG00000015216	SNRNP48	83	46.207	Capra_hircus
ENSOMEG00000022007	snrnp48	81	47.535	ENSTSYG00000000698	SNRNP48	82	46.831	Carlito_syrichta
ENSOMEG00000022007	snrnp48	86	44.201	ENSCAPG00000006768	SNRNP48	82	48.450	Cavia_aperea
ENSOMEG00000022007	snrnp48	95	42.693	ENSCPOG00000007910	SNRNP48	83	46.528	Cavia_porcellus
ENSOMEG00000022007	snrnp48	82	47.917	ENSCCAG00000035652	SNRNP48	83	47.222	Cebus_capucinus
ENSOMEG00000022007	snrnp48	95	45.161	ENSCATG00000033947	SNRNP48	83	46.875	Cercocebus_atys
ENSOMEG00000022007	snrnp48	81	47.887	ENSCLAG00000003765	SNRNP48	82	47.535	Chinchilla_lanigera
ENSOMEG00000022007	snrnp48	82	48.264	ENSCSAG00000007409	SNRNP48	83	47.569	Chlorocebus_sabaeus
ENSOMEG00000022007	snrnp48	86	47.664	ENSCPBG00000019146	SNRNP48	84	49.630	Chrysemys_picta_bellii
ENSOMEG00000022007	snrnp48	82	48.264	ENSCANG00000030017	SNRNP48	83	47.569	Colobus_angolensis_palliatus
ENSOMEG00000022007	snrnp48	83	39.519	ENSCGRG00001008805	-	72	42.735	Cricetulus_griseus_chok1gshd
ENSOMEG00000022007	snrnp48	95	44.058	ENSCGRG00001001076	-	96	44.109	Cricetulus_griseus_chok1gshd
ENSOMEG00000022007	snrnp48	95	44.058	ENSCGRG00000007781	Snrnp48	96	44.109	Cricetulus_griseus_crigri
ENSOMEG00000022007	snrnp48	75	70.703	ENSCSEG00000000722	snrnp48	79	69.784	Cynoglossus_semilaevis
ENSOMEG00000022007	snrnp48	91	76.752	ENSCVAG00000019829	snrnp48	81	76.752	Cyprinodon_variegatus
ENSOMEG00000022007	snrnp48	91	52.778	ENSDARG00000039989	snrnp48	81	56.522	Danio_rerio
ENSOMEG00000022007	snrnp48	84	47.458	ENSDNOG00000014978	SNRNP48	92	41.085	Dasypus_novemcinctus
ENSOMEG00000022007	snrnp48	95	42.775	ENSDORG00000015140	Snrnp48	83	46.021	Dipodomys_ordii
ENSOMEG00000022007	snrnp48	95	42.029	ENSEASG00005012021	SNRNP48	97	42.353	Equus_asinus_asinus
ENSOMEG00000022007	snrnp48	82	46.875	ENSECAG00000026937	SNRNP48	83	46.875	Equus_caballus
ENSOMEG00000022007	snrnp48	82	33.218	ENSEEUG00000015437	SNRNP48	83	33.218	Erinaceus_europaeus
ENSOMEG00000022007	snrnp48	93	58.631	ENSELUG00000009766	snrnp48	80	62.718	Esox_lucius
ENSOMEG00000022007	snrnp48	82	47.569	ENSFCAG00000018853	SNRNP48	83	46.875	Felis_catus
ENSOMEG00000022007	snrnp48	80	51.351	ENSFALG00000007797	SNRNP48	76	58.091	Ficedula_albicollis
ENSOMEG00000022007	snrnp48	95	43.768	ENSFDAG00000009231	SNRNP48	83	46.875	Fukomys_damarensis
ENSOMEG00000022007	snrnp48	65	80.973	ENSFHEG00000014647	snrnp48	93	80.297	Fundulus_heteroclitus
ENSOMEG00000022007	snrnp48	90	60.991	ENSGMOG00000018599	-	78	70.281	Gadus_morhua
ENSOMEG00000022007	snrnp48	75	55.431	ENSGALG00000013005	SNRNP48	85	55.906	Gallus_gallus
ENSOMEG00000022007	snrnp48	94	71.779	ENSGAFG00000021639	snrnp48	94	73.832	Gambusia_affinis
ENSOMEG00000022007	snrnp48	73	75.904	ENSGACG00000017756	-	96	70.588	Gasterosteus_aculeatus
ENSOMEG00000022007	snrnp48	82	46.104	ENSGAGG00000000865	SNRNP48	81	51.200	Gopherus_agassizii
ENSOMEG00000022007	snrnp48	82	48.264	ENSGGOG00000013220	SNRNP48	83	47.569	Gorilla_gorilla
ENSOMEG00000022007	snrnp48	93	76.656	ENSHBUG00000017066	snrnp48	92	76.656	Haplochromis_burtoni
ENSOMEG00000022007	snrnp48	82	46.875	ENSHGLG00000015241	SNRNP48	83	46.181	Heterocephalus_glaber_female
ENSOMEG00000022007	snrnp48	82	46.875	ENSHGLG00100010027	SNRNP48	83	46.181	Heterocephalus_glaber_male
ENSOMEG00000022007	snrnp48	74	70.356	ENSHCOG00000014066	snrnp48	93	65.432	Hippocampus_comes
ENSOMEG00000022007	snrnp48	82	47.917	ENSSTOG00000014635	SNRNP48	82	47.535	Ictidomys_tridecemlineatus
ENSOMEG00000022007	snrnp48	82	47.222	ENSJJAG00000011495	Snrnp48	83	46.875	Jaculus_jaculus
ENSOMEG00000022007	snrnp48	94	74.534	ENSKMAG00000016514	snrnp48	85	76.655	Kryptolebias_marmoratus
ENSOMEG00000022007	snrnp48	80	76.364	ENSLBEG00000026249	snrnp48	93	75.786	Labrus_bergylta
ENSOMEG00000022007	snrnp48	93	47.181	ENSLACG00000003958	SNRNP48	84	49.828	Latimeria_chalumnae
ENSOMEG00000022007	snrnp48	83	61.620	ENSLOCG00000004187	snrnp48	82	62.816	Lepisosteus_oculatus
ENSOMEG00000022007	snrnp48	81	47.018	ENSLAFG00000011152	SNRNP48	82	46.316	Loxodonta_africana
ENSOMEG00000022007	snrnp48	82	48.264	ENSMFAG00000045216	SNRNP48	83	47.569	Macaca_fascicularis
ENSOMEG00000022007	snrnp48	82	48.264	ENSMMUG00000014785	SNRNP48	83	47.569	Macaca_mulatta
ENSOMEG00000022007	snrnp48	82	48.264	ENSMNEG00000042269	SNRNP48	83	47.569	Macaca_nemestrina
ENSOMEG00000022007	snrnp48	82	48.264	ENSMLEG00000034004	SNRNP48	83	47.569	Mandrillus_leucophaeus
ENSOMEG00000022007	snrnp48	94	73.832	ENSMAMG00000018673	snrnp48	82	74.051	Mastacembelus_armatus
ENSOMEG00000022007	snrnp48	80	50.825	ENSMGAG00000006037	SNRNP48	81	57.202	Meleagris_gallopavo
ENSOMEG00000022007	snrnp48	95	43.478	ENSMAUG00000011944	Snrnp48	97	43.713	Mesocricetus_auratus
ENSOMEG00000022007	snrnp48	82	46.713	ENSMICG00000012497	SNRNP48	83	46.875	Microcebus_murinus
ENSOMEG00000022007	snrnp48	95	44.509	ENSMOCG00000015555	Snrnp48	84	48.454	Microtus_ochrogaster
ENSOMEG00000022007	snrnp48	55	81.579	ENSMMOG00000003072	-	60	81.579	Mola_mola
ENSOMEG00000022007	snrnp48	82	47.260	ENSMODG00000009996	SNRNP48	79	47.260	Monodelphis_domestica
ENSOMEG00000022007	snrnp48	94	75.232	ENSMALG00000005725	snrnp48	93	74.843	Monopterus_albus
ENSOMEG00000022007	snrnp48	95	43.188	MGP_CAROLIEiJ_G0018441	Snrnp48	96	43.807	Mus_caroli
ENSOMEG00000022007	snrnp48	95	43.188	ENSMUSG00000021431	Snrnp48	96	43.807	Mus_musculus
ENSOMEG00000022007	snrnp48	95	44.348	MGP_PahariEiJ_G0019509	Snrnp48	97	43.881	Mus_pahari
ENSOMEG00000022007	snrnp48	95	43.188	MGP_SPRETEiJ_G0019321	Snrnp48	96	44.109	Mus_spretus
ENSOMEG00000022007	snrnp48	95	45.797	ENSNGAG00000004849	Snrnp48	83	47.917	Nannospalax_galili
ENSOMEG00000022007	snrnp48	99	76.833	ENSNBRG00000012127	snrnp48	92	76.972	Neolamprologus_brichardi
ENSOMEG00000022007	snrnp48	82	48.264	ENSNLEG00000011667	SNRNP48	83	47.569	Nomascus_leucogenys
ENSOMEG00000022007	snrnp48	82	46.853	ENSOPRG00000015471	SNRNP48	87	46.503	Ochotona_princeps
ENSOMEG00000022007	snrnp48	93	77.287	ENSONIG00000001520	snrnp48	92	77.287	Oreochromis_niloticus
ENSOMEG00000022007	snrnp48	54	37.198	ENSOANG00000019888	-	99	39.130	Ornithorhynchus_anatinus
ENSOMEG00000022007	snrnp48	78	47.445	ENSOCUG00000005168	SNRNP48	92	46.875	Oryctolagus_cuniculus
ENSOMEG00000022007	snrnp48	87	90.476	ENSORLG00000015654	snrnp48	92	89.809	Oryzias_latipes
ENSOMEG00000022007	snrnp48	87	90.816	ENSORLG00020015976	snrnp48	79	90.127	Oryzias_latipes_hni
ENSOMEG00000022007	snrnp48	87	91.156	ENSORLG00015022379	snrnp48	79	90.446	Oryzias_latipes_hsok
ENSOMEG00000022007	snrnp48	83	47.241	ENSOGAG00000005275	SNRNP48	85	46.552	Otolemur_garnettii
ENSOMEG00000022007	snrnp48	80	45.918	ENSOARG00000017319	SNRNP48	79	49.576	Ovis_aries
ENSOMEG00000022007	snrnp48	82	48.264	ENSPPAG00000032873	SNRNP48	83	47.569	Pan_paniscus
ENSOMEG00000022007	snrnp48	82	47.222	ENSPPRG00000004283	SNRNP48	83	46.528	Panthera_pardus
ENSOMEG00000022007	snrnp48	68	51.489	ENSPTIG00000013502	SNRNP48	79	50.638	Panthera_tigris_altaica
ENSOMEG00000022007	snrnp48	82	48.264	ENSPTRG00000017703	SNRNP48	83	47.569	Pan_troglodytes
ENSOMEG00000022007	snrnp48	82	48.264	ENSPANG00000000771	SNRNP48	83	47.569	Papio_anubis
ENSOMEG00000022007	snrnp48	80	62.411	ENSPKIG00000013703	snrnp48	60	62.411	Paramormyrops_kingsleyae
ENSOMEG00000022007	snrnp48	80	48.355	ENSPSIG00000002213	SNRNP48	76	52.245	Pelodiscus_sinensis
ENSOMEG00000022007	snrnp48	77	65.299	ENSPMGG00000008120	snrnp48	92	65.637	Periophthalmus_magnuspinnatus
ENSOMEG00000022007	snrnp48	95	44.928	ENSPEMG00000008872	Snrnp48	97	44.776	Peromyscus_maniculatus_bairdii
ENSOMEG00000022007	snrnp48	94	73.926	ENSPFOG00000003578	snrnp48	94	74.143	Poecilia_formosa
ENSOMEG00000022007	snrnp48	69	76.271	ENSPLAG00000002290	snrnp48	82	76.271	Poecilia_latipinna
ENSOMEG00000022007	snrnp48	94	74.540	ENSPMEG00000018033	snrnp48	94	74.766	Poecilia_mexicana
ENSOMEG00000022007	snrnp48	94	72.699	ENSPREG00000018541	snrnp48	94	75.776	Poecilia_reticulata
ENSOMEG00000022007	snrnp48	82	47.569	ENSPPYG00000016209	SNRNP48	83	46.875	Pongo_abelii
ENSOMEG00000022007	snrnp48	70	37.551	ENSPCAG00000011991	SNRNP48	93	37.052	Procavia_capensis
ENSOMEG00000022007	snrnp48	82	46.690	ENSPVAG00000002854	SNRNP48	83	45.993	Pteropus_vampyrus
ENSOMEG00000022007	snrnp48	90	77.670	ENSPNYG00000015399	snrnp48	93	78.472	Pundamilia_nyererei
ENSOMEG00000022007	snrnp48	95	44.023	ENSRNOG00000013756	Snrnp48	82	47.887	Rattus_norvegicus
ENSOMEG00000022007	snrnp48	82	48.264	ENSRBIG00000043856	SNRNP48	89	47.569	Rhinopithecus_bieti
ENSOMEG00000022007	snrnp48	82	48.264	ENSRROG00000043229	SNRNP48	83	47.569	Rhinopithecus_roxellana
ENSOMEG00000022007	snrnp48	82	48.611	ENSSBOG00000019486	SNRNP48	83	47.917	Saimiri_boliviensis_boliviensis
ENSOMEG00000022007	snrnp48	82	48.649	ENSSHAG00000014483	SNRNP48	83	48.966	Sarcophilus_harrisii
ENSOMEG00000022007	snrnp48	71	63.710	ENSSFOG00015006610	snrnp48	68	61.592	Scleropages_formosus
ENSOMEG00000022007	snrnp48	94	77.987	ENSSDUG00000014953	snrnp48	93	78.594	Seriola_dumerili
ENSOMEG00000022007	snrnp48	94	77.673	ENSSLDG00000005989	snrnp48	93	78.275	Seriola_lalandi_dorsalis
ENSOMEG00000022007	snrnp48	80	47.619	ENSSPUG00000006257	SNRNP48	69	51.230	Sphenodon_punctatus
ENSOMEG00000022007	snrnp48	92	79.048	ENSSPAG00000006454	snrnp48	94	77.987	Stegastes_partitus
ENSOMEG00000022007	snrnp48	81	50.662	ENSTGUG00000007575	SNRNP48	78	55.466	Taeniopygia_guttata
ENSOMEG00000022007	snrnp48	94	62.733	ENSTRUG00000007031	snrnp48	93	68.536	Takifugu_rubripes
ENSOMEG00000022007	snrnp48	99	64.985	ENSTNIG00000012977	-	91	67.508	Tetraodon_nigroviridis
ENSOMEG00000022007	snrnp48	75	47.925	ENSTBEG00000015620	SNRNP48	75	48.235	Tupaia_belangeri
ENSOMEG00000022007	snrnp48	91	42.985	ENSTTRG00000016715	SNRNP48	83	46.528	Tursiops_truncatus
ENSOMEG00000022007	snrnp48	95	45.882	ENSUAMG00000003690	SNRNP48	83	48.084	Ursus_americanus
ENSOMEG00000022007	snrnp48	81	46.599	ENSVPAG00000003557	SNRNP48	96	45.775	Vicugna_pacos
ENSOMEG00000022007	snrnp48	95	43.478	ENSVVUG00000004996	SNRNP48	83	47.222	Vulpes_vulpes
ENSOMEG00000022007	snrnp48	91	46.795	ENSXETG00000020447	snrnp48	82	49.281	Xenopus_tropicalis
ENSOMEG00000022007	snrnp48	94	68.827	ENSXCOG00000004478	snrnp48	93	68.966	Xiphophorus_couchianus
ENSOMEG00000022007	snrnp48	94	74.695	ENSXMAG00000013595	snrnp48	94	74.923	Xiphophorus_maculatus