EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSOMEG00000022050 (Gene tree)
Gene ID
112147456
Gene Symbol
-
Alias
-
Full Name
pre-mRNA processing factor 38B
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Minus strand
Length
5751 bases
Position
chrNVQA01000011.1:10708438-10714188
Accession
112147456
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000020202PRP38PF03371.158e-5511
ENSOMEP00000020167PRP38PF03371.151.4e-4511
ENSOMEP00000020187PRP38PF03371.151.8e-4511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000029648-1201-ENSOMEP00000020187184 (aa)--
ENSOMET00000029590-556-ENSOMEP00000020167171 (aa)--
ENSOMET00000029626-2065-ENSOMEP00000020202458 (aa)XP_024129633UPI000CF82C61
Gene Model
Click here to download ENSOMEG00000022050's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022050's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000022050-9697.561ENSACIG00000016459-9696.970Amphilophus_citrinellus
ENSOMEG00000022050-9796.386ENSATEG00000014482-10088.147Anabas_testudineus
ENSOMEG00000022050-9191.026ENSBTAG00000047874PRPF38B8564.076Bos_taurus
ENSOMEG00000022050-8555.479WBGene00022434Y108G3AL.28145.149Caenorhabditis_elegans
ENSOMEG00000022050-7991.912ENSCAFG00020010992-9157.480Canis_lupus_dingo
ENSOMEG00000022050-9191.026ENSCHIG00000024357-8564.076Capra_hircus
ENSOMEG00000022050-8992.208ENSCPOG00000039545-8364.316Cavia_porcellus
ENSOMEG00000022050-8793.960ENSCLAG00000005801-8363.694Chinchilla_lanigera
ENSOMEG00000022050-7090.756ENSCHOG00000008972-9561.516Choloepus_hoffmanni
ENSOMEG00000022050-9488.889ENSCPBG00000028299-8364.842Chrysemys_picta_bellii
ENSOMEG00000022050-8573.793ENSCSAVG00000009443-7173.958Ciona_savignyi
ENSOMEG00000022050-9796.386ENSCSEG00000015030-10083.550Cynoglossus_semilaevis
ENSOMEG00000022050-10097.283ENSCVAG00000005543-8897.283Cyprinodon_variegatus
ENSOMEG00000022050-9170.513FBgn0030468CG16229370.229Drosophila_melanogaster
ENSOMEG00000022050-8493.103ENSETEG00000014690-9264.450Echinops_telfairi
ENSOMEG00000022050-9788.304ENSELUG00000010390-9766.023Esox_lucius
ENSOMEG00000022050-5791.753ENSFALG00000002673-8659.417Ficedula_albicollis
ENSOMEG00000022050-9790.964ENSGMOG00000012080-9970.650Gadus_morhua
ENSOMEG00000022050-9489.375ENSGALG00000001972-9264.780Gallus_gallus
ENSOMEG00000022050-9797.590ENSGAFG00000008943-10083.405Gambusia_affinis
ENSOMEG00000022050-9488.889ENSGAGG00000001563-8365.263Gopherus_agassizii
ENSOMEG00000022050-8992.208ENSHGLG00000016583PRPF38B8363.771Heterocephalus_glaber_female
ENSOMEG00000022050-8992.208ENSHGLG00100015525-8363.559Heterocephalus_glaber_male
ENSOMEG00000022050-9792.771ENSHCOG00000001071-10081.169Hippocampus_comes
ENSOMEG00000022050-9796.988ENSKMAG00000005540-10085.412Kryptolebias_marmoratus
ENSOMEG00000022050-8991.503ENSLACG00000015511-9758.824Latimeria_chalumnae
ENSOMEG00000022050-9091.613ENSMOCG00000020285-8264.286Microtus_ochrogaster
ENSOMEG00000022050-9792.771ENSMMOG00000011639-10083.726Mola_mola
ENSOMEG00000022050-8893.333ENSMODG00000002350-8785.091Monodelphis_domestica
ENSOMEG00000022050-9796.386ENSMALG00000019479-10087.284Monopterus_albus
ENSOMEG00000022050-9697.561ENSNBRG00000019221-9896.970Neolamprologus_brichardi
ENSOMEG00000022050-9796.386ENSONIG00000010129-10084.267Oreochromis_niloticus
ENSOMEG00000022050-9191.667ENSOANG00000007343-9260.435Ornithorhynchus_anatinus
ENSOMEG00000022050-9799.398ENSORLG00000015621-100100.000Oryzias_latipes
ENSOMEG00000022050-9799.398ENSORLG00020016276-100100.000Oryzias_latipes_hni
ENSOMEG00000022050-10099.457ENSORLG00015016270-10096.288Oryzias_latipes_hsok
ENSOMEG00000022050-8793.960ENSOGAG00000027048-8065.714Otolemur_garnettii
ENSOMEG00000022050-8494.444ENSOARG00000018899-8265.563Ovis_aries
ENSOMEG00000022050-9194.194ENSPKIG00000004815-9465.000Paramormyrops_kingsleyae
ENSOMEG00000022050-9789.941ENSPKIG00000017291-9063.786Paramormyrops_kingsleyae
ENSOMEG00000022050-9488.889ENSPSIG00000016569-9260.506Pelodiscus_sinensis
ENSOMEG00000022050-9293.631ENSPMGG00000017585-9793.631Periophthalmus_magnuspinnatus
ENSOMEG00000022050-8379.592ENSPMAG00000007150-9479.054Petromyzon_marinus
ENSOMEG00000022050-10096.739ENSPFOG00000004025-9796.739Poecilia_formosa
ENSOMEG00000022050-9796.988ENSPLAG00000019842-10083.190Poecilia_latipinna
ENSOMEG00000022050-9797.590ENSPMEG00000004807-9783.190Poecilia_mexicana
ENSOMEG00000022050-10096.739ENSPREG00000015599-10096.739Poecilia_reticulata
ENSOMEG00000022050-9191.613ENSPNAG00000017484-9563.083Pygocentrus_nattereri
ENSOMEG00000022050-8992.208ENSRNOG00000020438Prpf38b8463.404Rattus_norvegicus
ENSOMEG00000022050-9183.333ENSSFOG00015004405-9980.435Scleropages_formosus
ENSOMEG00000022050-9886.813ENSSFOG00015011251-9586.813Scleropages_formosus
ENSOMEG00000022050-9995.628ENSSMAG00000001781-9995.628Scophthalmus_maximus
ENSOMEG00000022050-9997.268ENSSDUG00000016574-9997.268Seriola_dumerili
ENSOMEG00000022050-9997.268ENSSLDG00000023487-9997.268Seriola_lalandi_dorsalis
ENSOMEG00000022050-9289.375ENSSPUG00000017742-8364.482Sphenodon_punctatus
ENSOMEG00000022050-9693.293ENSTRUG00000011765-10083.871Takifugu_rubripes
ENSOMEG00000022050-9693.939ENSTNIG00000015299-9971.460Tetraodon_nigroviridis
ENSOMEG00000022050-8777.181ENSTBEG00000007504-8759.348Tupaia_belangeri
ENSOMEG00000022050-8793.960ENSTTRG00000006479-8563.655Tursiops_truncatus
ENSOMEG00000022050-8568.966ENSVPAG00000005541-8455.246Vicugna_pacos
ENSOMEG00000022050-9092.258ENSXETG00000005260prpf38b8857.819Xenopus_tropicalis
ENSOMEG00000022050-9797.590ENSXCOG00000008329-10083.405Xiphophorus_couchianus
ENSOMEG00000022050-9797.590ENSXMAG00000023831-10083.621Xiphophorus_maculatus

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