EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000022138 (Gene tree)
Gene ID: 112143370
Gene Symbol: rbm25a
Alias: -
Full Name: RNA-binding protein 25-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 14141 bases
Position: chrNVQA01000001.1:1751790-1765930
Accession: 112143370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000020269	RRM_1	PF00076.22	1.7e-08	1	1
ENSOMEP00000020239	RRM_1	PF00076.22	1.8e-08	1	1
ENSOMEP00000020239	PWI	PF01480.17	1.3e-13	1	1
ENSOMEP00000020204	PWI	PF01480.17	1.4e-13	1	1
ENSOMEP00000020160	PWI	PF01480.17	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000035980	-	2412	-	ENSOMEP00000020160	803 (aa)	-	-
ENSOMET00000029635	-	3387	-	ENSOMEP00000020204	838 (aa)	-	-
ENSOMET00000029678	-	3445	-	ENSOMEP00000020239	834 (aa)	XP_024123070	UPI000CF7BAE9
ENSOMET00000036036	-	5120	-	ENSOMEP00000020269	759 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000022138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022138's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000022138	rbm25a	59	73.333	ENSOMEG00000023172	rbm25b	52	75.388

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000022138	rbm25a	85	82.251	ENSAPOG00000017757	rbm25a	81	77.391	Acanthochromis_polyacanthus
ENSOMEG00000022138	rbm25a	61	65.650	ENSACIG00000014178	rbm25b	51	68.722	Amphilophus_citrinellus
ENSOMEG00000022138	rbm25a	59	83.333	ENSACIG00000019482	rbm25a	84	77.925	Amphilophus_citrinellus
ENSOMEG00000022138	rbm25a	91	80.866	ENSAOCG00000013695	rbm25a	84	75.090	Amphiprion_ocellaris
ENSOMEG00000022138	rbm25a	59	70.968	ENSAPEG00000009666	rbm25b	55	72.345	Amphiprion_percula
ENSOMEG00000022138	rbm25a	59	84.350	ENSAPEG00000007514	rbm25a	53	83.111	Amphiprion_percula
ENSOMEG00000022138	rbm25a	59	84.631	ENSATEG00000020676	rbm25a	63	82.946	Anabas_testudineus
ENSOMEG00000022138	rbm25a	60	71.116	ENSATEG00000017312	rbm25b	84	67.841	Anabas_testudineus
ENSOMEG00000022138	rbm25a	91	77.165	ENSACLG00000027482	rbm25a	62	90.650	Astatotilapia_calliptera
ENSOMEG00000022138	rbm25a	58	73.320	ENSACLG00000024359	rbm25b	84	69.163	Astatotilapia_calliptera
ENSOMEG00000022138	rbm25a	74	41.935	WBGene00012245	W04D2.6	64	42.177	Caenorhabditis_elegans
ENSOMEG00000022138	rbm25a	63	85.135	ENSCHOG00000008903	RBM25	63	84.932	Choloepus_hoffmanni
ENSOMEG00000022138	rbm25a	62	68.333	ENSCANG00000043874	RBM25	98	69.655	Colobus_angolensis_palliatus
ENSOMEG00000022138	rbm25a	57	78.992	ENSCSEG00000009430	rbm25a	53	80.444	Cynoglossus_semilaevis
ENSOMEG00000022138	rbm25a	59	69.739	ENSCSEG00000020737	rbm25b	53	70.705	Cynoglossus_semilaevis
ENSOMEG00000022138	rbm25a	63	61.868	ENSCVAG00000003478	rbm25b	52	66.302	Cyprinodon_variegatus
ENSOMEG00000022138	rbm25a	71	81.342	ENSCVAG00000005498	rbm25a	100	81.549	Cyprinodon_variegatus
ENSOMEG00000022138	rbm25a	67	74.138	ENSDARG00000006395	rbm25b	52	73.614	Danio_rerio
ENSOMEG00000022138	rbm25a	64	66.667	ENSEBUG00000002963	rbm25b	52	62.162	Eptatretus_burgeri
ENSOMEG00000022138	rbm25a	53	86.047	ENSEEUG00000007350	RBM25	81	69.710	Erinaceus_europaeus
ENSOMEG00000022138	rbm25a	59	70.179	ENSELUG00000007730	rbm25b	53	72.609	Esox_lucius
ENSOMEG00000022138	rbm25a	100	82.659	ENSFHEG00000005318	rbm25a	100	83.121	Fundulus_heteroclitus
ENSOMEG00000022138	rbm25a	61	71.233	ENSFHEG00000003513	rbm25b	84	68.502	Fundulus_heteroclitus
ENSOMEG00000022138	rbm25a	81	75.877	ENSGMOG00000014097	rbm25b	63	75.877	Gadus_morhua
ENSOMEG00000022138	rbm25a	85	73.932	ENSGMOG00000014070	rbm25a	78	82.745	Gadus_morhua
ENSOMEG00000022138	rbm25a	100	65.000	ENSGAFG00000001092	rbm25b	72	69.011	Gambusia_affinis
ENSOMEG00000022138	rbm25a	100	83.743	ENSGAFG00000018036	rbm25a	54	82.643	Gambusia_affinis
ENSOMEG00000022138	rbm25a	58	73.523	ENSHBUG00000018499	rbm25b	84	69.163	Haplochromis_burtoni
ENSOMEG00000022138	rbm25a	57	83.789	ENSHBUG00000016908	rbm25a	57	83.299	Haplochromis_burtoni
ENSOMEG00000022138	rbm25a	97	67.897	ENSHCOG00000000142	rbm25b	52	69.740	Hippocampus_comes
ENSOMEG00000022138	rbm25a	95	76.499	ENSKMAG00000016242	rbm25a	81	71.239	Kryptolebias_marmoratus
ENSOMEG00000022138	rbm25a	62	83.740	ENSKMAG00000018826	rbm25b	50	67.550	Kryptolebias_marmoratus
ENSOMEG00000022138	rbm25a	100	70.130	ENSLBEG00000010667	rbm25b	84	67.621	Labrus_bergylta
ENSOMEG00000022138	rbm25a	59	70.766	ENSMAMG00000004524	rbm25b	84	67.920	Mastacembelus_armatus
ENSOMEG00000022138	rbm25a	59	70.515	ENSMAMG00000000165	rbm25a	51	77.703	Mastacembelus_armatus
ENSOMEG00000022138	rbm25a	57	83.789	ENSMZEG00005011183	rbm25a	57	83.299	Maylandia_zebra
ENSOMEG00000022138	rbm25a	58	73.320	ENSMZEG00005001453	rbm25b	84	69.163	Maylandia_zebra
ENSOMEG00000022138	rbm25a	100	71.636	ENSMMOG00000015545	rbm25b	58	73.230	Mola_mola
ENSOMEG00000022138	rbm25a	61	69.857	ENSMMOG00000009065	rbm25a	51	79.556	Mola_mola
ENSOMEG00000022138	rbm25a	59	72.233	ENSMALG00000020441	rbm25b	82	73.614	Monopterus_albus
ENSOMEG00000022138	rbm25a	52	80.833	MGP_SPRETEiJ_G0018766	-	93	76.923	Mus_spretus
ENSOMEG00000022138	rbm25a	55	62.690	ENSMLUG00000024167	-	62	68.070	Myotis_lucifugus
ENSOMEG00000022138	rbm25a	57	84.000	ENSNBRG00000003761	rbm25a	57	83.503	Neolamprologus_brichardi
ENSOMEG00000022138	rbm25a	67	61.340	ENSOCUG00000013737	RBM25	63	78.571	Oryctolagus_cuniculus
ENSOMEG00000022138	rbm25a	50	79.469	ENSORLG00000009958	rbm25a	99	97.692	Oryzias_latipes
ENSOMEG00000022138	rbm25a	59	72.525	ENSORLG00000011874	rbm25b	83	68.874	Oryzias_latipes
ENSOMEG00000022138	rbm25a	52	95.685	ENSORLG00020002472	-	89	95.685	Oryzias_latipes_hni
ENSOMEG00000022138	rbm25a	59	72.727	ENSORLG00020016422	rbm25b	83	69.095	Oryzias_latipes_hni
ENSOMEG00000022138	rbm25a	59	73.131	ENSORLG00015011269	rbm25b	83	69.316	Oryzias_latipes_hsok
ENSOMEG00000022138	rbm25a	59	72.470	ENSPKIG00000003203	rbm25b	52	74.058	Paramormyrops_kingsleyae
ENSOMEG00000022138	rbm25a	55	65.584	ENSPMGG00000001791	rbm25a	97	66.444	Periophthalmus_magnuspinnatus
ENSOMEG00000022138	rbm25a	59	72.727	ENSPMGG00000015740	rbm25b	53	72.527	Periophthalmus_magnuspinnatus
ENSOMEG00000022138	rbm25a	59	72.837	ENSPFOG00000018808	rbm25b	84	69.383	Poecilia_formosa
ENSOMEG00000022138	rbm25a	100	83.584	ENSPFOG00000017931	rbm25a	80	78.066	Poecilia_formosa
ENSOMEG00000022138	rbm25a	100	83.662	ENSPLAG00000018338	rbm25a	100	83.624	Poecilia_latipinna
ENSOMEG00000022138	rbm25a	50	73.735	ENSPMEG00000012262	rbm25b	100	74.217	Poecilia_mexicana
ENSOMEG00000022138	rbm25a	100	83.468	ENSPMEG00000024470	rbm25a	62	82.205	Poecilia_mexicana
ENSOMEG00000022138	rbm25a	59	72.636	ENSPMEG00000019161	rbm25b	84	69.383	Poecilia_mexicana
ENSOMEG00000022138	rbm25a	59	73.441	ENSPREG00000008522	rbm25b	84	69.604	Poecilia_reticulata
ENSOMEG00000022138	rbm25a	100	83.740	ENSPREG00000009228	rbm25a	80	78.229	Poecilia_reticulata
ENSOMEG00000022138	rbm25a	64	75.000	ENSPCAG00000006226	RBM25	74	73.729	Procavia_capensis
ENSOMEG00000022138	rbm25a	62	80.833	ENSPVAG00000003931	RBM25	80	64.823	Pteropus_vampyrus
ENSOMEG00000022138	rbm25a	59	62.062	ENSPNAG00000012024	rbm25b	52	72.566	Pygocentrus_nattereri
ENSOMEG00000022138	rbm25a	58	73.770	ENSSFOG00015007093	rbm25	53	75.000	Scleropages_formosus
ENSOMEG00000022138	rbm25a	59	83.061	ENSSMAG00000009745	rbm25a	53	82.522	Scophthalmus_maximus
ENSOMEG00000022138	rbm25a	59	85.246	ENSSDUG00000017984	rbm25a	53	84.889	Seriola_dumerili
ENSOMEG00000022138	rbm25a	59	85.246	ENSSLDG00000010342	rbm25a	53	84.889	Seriola_lalandi_dorsalis
ENSOMEG00000022138	rbm25a	58	72.199	ENSSLDG00000024573	rbm25b	93	73.673	Seriola_lalandi_dorsalis
ENSOMEG00000022138	rbm25a	59	72.636	ENSSPAG00000016168	rbm25b	53	73.673	Stegastes_partitus
ENSOMEG00000022138	rbm25a	57	86.526	ENSSPAG00000011114	rbm25a	53	85.556	Stegastes_partitus
ENSOMEG00000022138	rbm25a	59	72.211	ENSTRUG00000017964	rbm25b	53	72.566	Takifugu_rubripes
ENSOMEG00000022138	rbm25a	58	79.381	ENSTRUG00000003076	rbm25a	83	72.894	Takifugu_rubripes
ENSOMEG00000022138	rbm25a	90	63.728	ENSTNIG00000012222	rbm25b	52	67.105	Tetraodon_nigroviridis
ENSOMEG00000022138	rbm25a	61	81.250	ENSTBEG00000010538	-	62	81.250	Tupaia_belangeri
ENSOMEG00000022138	rbm25a	55	70.417	ENSVPAG00000009052	RBM25	74	70.417	Vicugna_pacos
ENSOMEG00000022138	rbm25a	100	79.812	ENSXCOG00000004043	RBM25	51	79.029	Xiphophorus_couchianus
ENSOMEG00000022138	rbm25a	100	62.310	ENSXCOG00000002222	rbm25b	50	67.108	Xiphophorus_couchianus
ENSOMEG00000022138	rbm25a	100	66.861	ENSXMAG00000017290	rbm25b	84	69.011	Xiphophorus_maculatus
ENSOMEG00000022138	rbm25a	100	84.211	ENSXMAG00000009077	RBM25	59	83.629	Xiphophorus_maculatus